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The map label for this gene is fdx

Identifier: 148827511

GI number: 148827511

Start: 872855

End: 873196

Strand: Reverse

Name: fdx

Synonym: CGSHiGG_04670

Alternate gene names: 148827511

Gene position: 873196-872855 (Counterclockwise)

Preceding gene: 148827512

Following gene: 148827510

Centisome position: 46.27

GC content: 38.89

Gene sequence:

>342_bases
ATGCCAAAAGTGATTTTTTTACCTAATGAAGATTTTTGTCCTGAAGGTATGGTCGTTGATGCTGCAACAGGAGATAACTT
ATTAGAAGTTGCTCACAATGCGGGAGTAGAAATTCATCATGCTTGTGATGGTTCTTGTGCTTGTACAACTTGCCACGTGA
TTGTTCGTGAGGGGTTTGATTCTTTAAATGAAACGAGTGATCAAGAAGAAGATATGCTAGATAAGGCTTGGGGATTAGAA
ATGGATAGCCGTTTATCTTGTCAATGTGTCGTGGGAAATGAAGATCTTGTGGTAGAAATTCCAAAATATAACCTTAATCA
CGCAAATGAGGCGGCTCACTAA

Upstream 100 bases:

>100_bases
GAATGCGTCAATTAATAAAGCTTTGACGGGTAAAAATCTGTCAGACATTGAAAATCCGTAAGAGTGCGGTCAGATATTAA
ATAATTTTGAGGAAAGTATT

Downstream 100 bases:

>100_bases
TGAAATGGACAGACGCCCAATTAATTGCAGAAGAACTTTACGATCGTAATCCAGATTTAGATCCAAAAACCGTTCGTTTT
ACTGATTTACATAAATGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MPKVIFLPNEDFCPEGMVVDAATGDNLLEVAHNAGVEIHHACDGSCACTTCHVIVREGFDSLNETSDQEEDMLDKAWGLE
MDSRLSCQCVVGNEDLVVEIPKYNLNHANEAAH

Sequences:

>Translated_113_residues
MPKVIFLPNEDFCPEGMVVDAATGDNLLEVAHNAGVEIHHACDGSCACTTCHVIVREGFDSLNETSDQEEDMLDKAWGLE
MDSRLSCQCVVGNEDLVVEIPKYNLNHANEAAH
>Mature_112_residues
PKVIFLPNEDFCPEGMVVDAATGDNLLEVAHNAGVEIHHACDGSCACTTCHVIVREGFDSLNETSDQEEDMLDKAWGLEM
DSRLSCQCVVGNEDLVVEIPKYNLNHANEAAH

Specific function: Ferredoxin are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain

Homologues:

Organism=Homo sapiens, GI72534754, Length=106, Percent_Identity=39.622641509434, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI1788874, Length=110, Percent_Identity=64.5454545454545, Blast_Score=158, Evalue=7e-41,
Organism=Caenorhabditis elegans, GI17544202, Length=91, Percent_Identity=39.5604395604396, Blast_Score=67, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6325004, Length=89, Percent_Identity=41.5730337078652, Blast_Score=69, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24661503, Length=91, Percent_Identity=42.8571428571429, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): FER_HAEIN (P44428)

Other databases:

- EMBL:   L42023
- PIR:   A64064
- RefSeq:   NP_438533.1
- ProteinModelPortal:   P44428
- SMR:   P44428
- GeneID:   949473
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0372
- TIGR:   HI_0372
- HOGENOM:   HBG524254
- OMA:   VCACTTC
- ProtClustDB:   CLSK892367
- BioCyc:   HINF71421:HI_0372-MONOMER
- GO:   GO:0006810
- InterPro:   IPR001055
- InterPro:   IPR018298
- InterPro:   IPR012675
- InterPro:   IPR011536
- InterPro:   IPR001041
- Gene3D:   G3DSA:3.10.20.30
- PRINTS:   PR00355
- TIGRFAMs:   TIGR02007

Pfam domain/function: PF00111 Fer2; SSF54292 Ferredoxin

EC number: NA

Molecular weight: Translated: 12345; Mature: 12214

Theoretical pI: Translated: 4.03; Mature: 4.03

Prosite motif: PS51085 2FE2S_FER_2; PS00814 ADX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
9.7 %Cys+Met (Translated Protein)
6.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
8.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKVIFLPNEDFCPEGMVVDAATGDNLLEVAHNAGVEIHHACDGSCACTTCHVIVREGFD
CCEEEECCCCCCCCCCEEEECCCCCHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCC
SLNETSDQEEDMLDKAWGLEMDSRLSCQCVVGNEDLVVEIPKYNLNHANEAAH
CCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
PKVIFLPNEDFCPEGMVVDAATGDNLLEVAHNAGVEIHHACDGSCACTTCHVIVREGFD
CEEEECCCCCCCCCCEEEECCCCCHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCC
SLNETSDQEEDMLDKAWGLEMDSRLSCQCVVGNEDLVVEIPKYNLNHANEAAH
CCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: 2Fe-2S Cluster. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800