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The map label for this gene is tonB [H]

Identifier: 148827394

GI number: 148827394

Start: 750612

End: 751406

Strand: Reverse

Name: tonB [H]

Synonym: CGSHiGG_03950

Alternate gene names: 148827394

Gene position: 751406-750612 (Counterclockwise)

Preceding gene: 148827395

Following gene: 148827393

Centisome position: 39.82

GC content: 38.99

Gene sequence:

>795_bases
ATGCAGCAAACAAAACGTTCGCTATTGGGTTTGCTTATTTCTTTGATCGCACACGGTATTGTTATAGGATTTATCTTATG
GAATTGGAATGAGCCAAGTGATAGTGCAAATAGCGCACAAGGCGATATATCTACAAGTATTTCTATGGAGCTATTACAGG
GTATGGTGTTGGAAGAACCTGCTCCAGAGCCAGAAGATGTACAAAAAGAGCCAGAAAATGTACAAAAAGAGCCAGAACCA
GAAAAACAAGAAATTGTAGAAGATCCAACAATAAAACCTGAACCGAAAAAAATCAAAGAACCAGAAAAGGAAAAGCCAAA
ACCCAAAGAAAAACCAAAAGAAAAGCCGAAGAATAAACCTAAAAAAGAGGTTAAACCACAAAAGAAACCAATCAATAAAG
AGCTACCAAAAGGCGATGAAAATATTGATTCAAGTGCCAACGTAAATGATAAAGCAAGTACAACAAGCGCTGCTAATAGC
AATGCACAGGTAGCAGGAAGTGGAACGGATACGAGTGAAATAGCGGCTTACCGTTCTGCAATCCGCCGTGAAATTGAAAG
CCATAAACGTTATCCAACTCGAGCGAAGATAATGCGCAAACAAGGAAAAGTGAGTGTATCTTTTAATGTAGGAGCTGATG
GTTCATTAAGTGGTGCTAAGGTTACAAAATCCTCAGGCGATGAAAGTTTAGATAAGGCGGCATTAGACGCTATTAACGTA
TCTCGCTCTGTTGGAACAAGACCCGCAGGATTTCCTTCGAGTTTAAGTGTGCAAATTAGTTTTACTCTTCAATAA

Upstream 100 bases:

>100_bases
GGCAATTGTTTCTATGAAAGATAAGGGAAAAAGTGCGGGTAAAAATTCTCAAGAATCTACTCCTTCCCAATCTGTACCAA
CTACGCCGTAAGGAATAATT

Downstream 100 bases:

>100_bases
AATGTGATATGGAAGATAAATGGTAGCAATTAATCTTCCCTAAAACTAAAGCTATAAAATTAAGGACTAAATCTATAATC
ATAGGTTTAGTCCTTTTAAT

Product: TonB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MQQTKRSLLGLLISLIAHGIVIGFILWNWNEPSDSANSAQGDISTSISMELLQGMVLEEPAPEPEDVQKEPENVQKEPEP
EKQEIVEDPTIKPEPKKIKEPEKEKPKPKEKPKEKPKNKPKKEVKPQKKPINKELPKGDENIDSSANVNDKASTTSAANS
NAQVAGSGTDTSEIAAYRSAIRREIESHKRYPTRAKIMRKQGKVSVSFNVGADGSLSGAKVTKSSGDESLDKAALDAINV
SRSVGTRPAGFPSSLSVQISFTLQ

Sequences:

>Translated_264_residues
MQQTKRSLLGLLISLIAHGIVIGFILWNWNEPSDSANSAQGDISTSISMELLQGMVLEEPAPEPEDVQKEPENVQKEPEP
EKQEIVEDPTIKPEPKKIKEPEKEKPKPKEKPKEKPKNKPKKEVKPQKKPINKELPKGDENIDSSANVNDKASTTSAANS
NAQVAGSGTDTSEIAAYRSAIRREIESHKRYPTRAKIMRKQGKVSVSFNVGADGSLSGAKVTKSSGDESLDKAALDAINV
SRSVGTRPAGFPSSLSVQISFTLQ
>Mature_264_residues
MQQTKRSLLGLLISLIAHGIVIGFILWNWNEPSDSANSAQGDISTSISMELLQGMVLEEPAPEPEDVQKEPENVQKEPEP
EKQEIVEDPTIKPEPKKIKEPEKEKPKPKEKPKEKPKNKPKKEVKPQKKPINKELPKGDENIDSSANVNDKASTTSAANS
NAQVAGSGTDTSEIAAYRSAIRREIESHKRYPTRAKIMRKQGKVSVSFNVGADGSLSGAKVTKSSGDESLDKAALDAINV
SRSVGTRPAGFPSSLSVQISFTLQ

Specific function: Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requirin

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003538
- InterPro:   IPR006260 [H]

Pfam domain/function: PF03544 TonB [H]

EC number: NA

Molecular weight: Translated: 28731; Mature: 28731

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQTKRSLLGLLISLIAHGIVIGFILWNWNEPSDSANSAQGDISTSISMELLQGMVLEEP
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
APEPEDVQKEPENVQKEPEPEKQEIVEDPTIKPEPKKIKEPEKEKPKPKEKPKEKPKNKP
CCCCHHHHCCHHHHCCCCCCHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCHHCCCCCC
KKEVKPQKKPINKELPKGDENIDSSANVNDKASTTSAANSNAQVAGSGTDTSEIAAYRSA
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHH
IRREIESHKRYPTRAKIMRKQGKVSVSFNVGADGSLSGAKVTKSSGDESLDKAALDAINV
HHHHHHHHCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCEEECCCCHHHHHHHHHHHHHH
SRSVGTRPAGFPSSLSVQISFTLQ
HHHCCCCCCCCCCCEEEEEEEEEC
>Mature Secondary Structure
MQQTKRSLLGLLISLIAHGIVIGFILWNWNEPSDSANSAQGDISTSISMELLQGMVLEEP
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
APEPEDVQKEPENVQKEPEPEKQEIVEDPTIKPEPKKIKEPEKEKPKPKEKPKEKPKNKP
CCCCHHHHCCHHHHCCCCCCHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCHHCCCCCC
KKEVKPQKKPINKELPKGDENIDSSANVNDKASTTSAANSNAQVAGSGTDTSEIAAYRSA
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHH
IRREIESHKRYPTRAKIMRKQGKVSVSFNVGADGSLSGAKVTKSSGDESLDKAALDAINV
HHHHHHHHCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCEEECCCCHHHHHHHHHHHHHH
SRSVGTRPAGFPSSLSVQISFTLQ
HHHCCCCCCCCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8188372; 7542800 [H]