| Definition | Haemophilus influenzae PittGG chromosome, complete genome. |
|---|---|
| Accession | NC_009567 |
| Length | 1,887,192 |
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The map label for this gene is hsdM [C]
Identifier: 148827246
GI number: 148827246
Start: 561338
End: 563710
Strand: Direct
Name: hsdM [C]
Synonym: CGSHiGG_03080
Alternate gene names: 148827246
Gene position: 561338-563710 (Clockwise)
Preceding gene: 148827241
Following gene: 148827247
Centisome position: 29.74
GC content: 44.21
Gene sequence:
>2373_bases ATGGATCATTCTGTTCATAACAAGCTGGTTTCTTTTATTTGGAGTATTGCAGACGATTGTCTGCGCGATGTGTATGTGCG CGGTAAATATCGTGATGTGATTTTACCGATGTTTGTGCTTCGTCGTTTGGATACTTTACTTGAGCCAAGCAAAGATGCCG TATTGGAAGAAATGCGTTTTCAAAAAGAAGAATTGGCATTCACAGAATTGGATGACCTTCCCCTTAAAAAAATTACCGGT CATGTTTTTTATAACACCTCAAAATGGACATTAAAATCCCTCTATCAAACCGCCAGCAATACGCCGCAGTATATGCTGGC CAATTTTGAAGAATATCTTGATGGTTTCAGCACCAACGTTCATGAAATCATCAACTGCTTCAAGCTGCGTGAACAAATCC GCCACATGTCCCATAAAAATGTTTTGCTGAGTGTGTTGGAAAAATTTGTATCGCCCTATATCAATCTTACCCCTAAAGAA CAACAAGACCCTGAGGGCAACAAATTACCAGCGCTGACCAATCTGGGCATGGGCTATGTATTTGAAGAACTGATTCGTAA ATTTAACGAAGAAAATAACGAAGAAGCTGGCGAACACTTTACCCCACGCGAAGTGATCGAGCTGATGACGCATTTAGTTT TTGATCCGCTCAAAGACCAAATTCCGGCCATTATTACGATTTACGACCCAGCTTGCGGCAGCGGTGGCATGCTGACCGAG TCGCAAAACTTTATTGAGCAAAAATATCCGCTATCTGAATCACAAGGCGAGCGTTCCATCTTTTTGTTTGGTAAAGAAAC CAATGATGAAACCTATGCCATTTGTAAATCTGACATGATGATTAAAGGTGATAATCCCGAAAACATCAAAGTCGGCTCAA CCCTTGCTACAGATAGCTTCCAAGGTAATCACTTTGACTTTATGCTTTCCAACCCGCCATATGGCAAAAGCTGGAGCAAA GATCAAGCCTATATCAAAGACGGCAATGAGGTGATCGACAGTCGCTTTAAAGTTACCTTACCAGATTACTGGGGCAATGA AGAAACCCTCGATGCCACCCCACGCTCCAGCGATGGTCAGCTGCTTTTCCTGATGGAAATGGTCAACAAAATGAAATCCC CGAAAAACAACAAAATCGGCAGCCGTGTTGCCTCTGTGCATAACGGCTCAAGCCTGTTTACTGGCGATGCAGGTTCAGGA GAAAGCAACATCCGTCGCCATATTATTGAAAACGATTTGCTGGAGGCCATCGTACAGCTGCCTAACAACCTGTTCTACAA CACAGGCATTACCACCTATATTTGGTTGCTGTCCAACAATAAACCTGAAGCACGCAAAGGCAAAGTTCAGCTGATTGATG CCAGCCTCTTGTTCCGTAAATTGCGTAAAAACCTTGGCGACAAAAACTGCGAATTTGCCCCGGAGCATATTGCGGAAATT ACTCAAAACTATCTTGATTTCACCGCCAAAGCGCGCGAAACCGACAGCCAAAACGAAGCAGTCGGCCTAGCTTCACAGAT TTTTGACAATCAAGATTTCGGCTATTACAAAGTTACCATCGAACGCCCGGATCGCCGTTCTGCACAATTTACCGCAGAAA ATATTGCGCCTTTACGTTTTGACAAAGCCTTGTTTGAGCCGATGCAATATCTTTATCAGCAACATGGCGAACAAATTTAC AACGCCGGATTTTTAGCCAAAACCGAGCCAGAAATCAGCACTTGGTGTGAGGCGCAAGGGATTGCCTTAAACAACAAAAA CAAAGCCAAGTTGCTGGATGTCAAAACGTGGGAAAAAGCCGCCGCACTTTTTCAGACGGCATCAAAACTGCTTGAACATT TCGGCTCAACCCAATTTGACGATTTCAACCAATTCAAACAAGCCGTGGAAGGCCGTCTGAAAGCCGAAAAAATCCCCCTT TCTGCCACAGAGAAAAAGGCCATTTTCAATGCCGTAAGTTGGTACGATGAAAATGCCGCCAAAGTGATTGCCAAAACACT CAAGCTCAAACCAAACGAATTGGACGCCCTTTGCCAACGCTACCAATGCCAAGCCGACGAGCTGGCAGATTTCGGCTATT ACGCTACCGGCAAAGCAGGCGAATATATCCAATATGAAACCAGCAGCGACTTACGCGACAGCGAATCCATACCGCTTAAA CAAAATATCCACGATTATTTCAAAGCCGAAGTGCAACCGCACATCAGCGAAGCATGGCTGAATATGGAAAGCGTGAAAAT CGGCTATGAAATCAGCTTCAACAAATACTTCTACCGCCATAAGTCATTGCGCAGCCTTGAGGAAGTTACCCAAGACATTC TTGCGCTGGAAAAACAGGCTGACGGCTTGATTAGTGAAATTTTAGAGGCTTAA
Upstream 100 bases:
>100_bases TAATAACAATTAGCTTCCTTTAATAAAAGAAAAAATTGAATGCCCATTAAAAATAAGCAACAATACCCAAAAAATTTCAT AATATTAAGTGGGAACAAAT
Downstream 100 bases:
>100_bases TAAAAAACAAACTATTAAGCAAGTTTTAATAGGTCTTAAGTAAGGAAATTCAAAATATATAACACATTGAAAAATAATGA ATTTTACCTTTTAAGCAAGA
Product: putative type I restriction-modification system, methyltransferase subunit
Products: NA
Alternate protein names: M.MjaXP [H]
Number of amino acids: Translated: 790; Mature: 790
Protein sequence:
>790_residues MDHSVHNKLVSFIWSIADDCLRDVYVRGKYRDVILPMFVLRRLDTLLEPSKDAVLEEMRFQKEELAFTELDDLPLKKITG HVFYNTSKWTLKSLYQTASNTPQYMLANFEEYLDGFSTNVHEIINCFKLREQIRHMSHKNVLLSVLEKFVSPYINLTPKE QQDPEGNKLPALTNLGMGYVFEELIRKFNEENNEEAGEHFTPREVIELMTHLVFDPLKDQIPAIITIYDPACGSGGMLTE SQNFIEQKYPLSESQGERSIFLFGKETNDETYAICKSDMMIKGDNPENIKVGSTLATDSFQGNHFDFMLSNPPYGKSWSK DQAYIKDGNEVIDSRFKVTLPDYWGNEETLDATPRSSDGQLLFLMEMVNKMKSPKNNKIGSRVASVHNGSSLFTGDAGSG ESNIRRHIIENDLLEAIVQLPNNLFYNTGITTYIWLLSNNKPEARKGKVQLIDASLLFRKLRKNLGDKNCEFAPEHIAEI TQNYLDFTAKARETDSQNEAVGLASQIFDNQDFGYYKVTIERPDRRSAQFTAENIAPLRFDKALFEPMQYLYQQHGEQIY NAGFLAKTEPEISTWCEAQGIALNNKNKAKLLDVKTWEKAAALFQTASKLLEHFGSTQFDDFNQFKQAVEGRLKAEKIPL SATEKKAIFNAVSWYDENAAKVIAKTLKLKPNELDALCQRYQCQADELADFGYYATGKAGEYIQYETSSDLRDSESIPLK QNIHDYFKAEVQPHISEAWLNMESVKIGYEISFNKYFYRHKSLRSLEEVTQDILALEKQADGLISEILEA
Sequences:
>Translated_790_residues MDHSVHNKLVSFIWSIADDCLRDVYVRGKYRDVILPMFVLRRLDTLLEPSKDAVLEEMRFQKEELAFTELDDLPLKKITG HVFYNTSKWTLKSLYQTASNTPQYMLANFEEYLDGFSTNVHEIINCFKLREQIRHMSHKNVLLSVLEKFVSPYINLTPKE QQDPEGNKLPALTNLGMGYVFEELIRKFNEENNEEAGEHFTPREVIELMTHLVFDPLKDQIPAIITIYDPACGSGGMLTE SQNFIEQKYPLSESQGERSIFLFGKETNDETYAICKSDMMIKGDNPENIKVGSTLATDSFQGNHFDFMLSNPPYGKSWSK DQAYIKDGNEVIDSRFKVTLPDYWGNEETLDATPRSSDGQLLFLMEMVNKMKSPKNNKIGSRVASVHNGSSLFTGDAGSG ESNIRRHIIENDLLEAIVQLPNNLFYNTGITTYIWLLSNNKPEARKGKVQLIDASLLFRKLRKNLGDKNCEFAPEHIAEI TQNYLDFTAKARETDSQNEAVGLASQIFDNQDFGYYKVTIERPDRRSAQFTAENIAPLRFDKALFEPMQYLYQQHGEQIY NAGFLAKTEPEISTWCEAQGIALNNKNKAKLLDVKTWEKAAALFQTASKLLEHFGSTQFDDFNQFKQAVEGRLKAEKIPL SATEKKAIFNAVSWYDENAAKVIAKTLKLKPNELDALCQRYQCQADELADFGYYATGKAGEYIQYETSSDLRDSESIPLK QNIHDYFKAEVQPHISEAWLNMESVKIGYEISFNKYFYRHKSLRSLEEVTQDILALEKQADGLISEILEA >Mature_790_residues MDHSVHNKLVSFIWSIADDCLRDVYVRGKYRDVILPMFVLRRLDTLLEPSKDAVLEEMRFQKEELAFTELDDLPLKKITG HVFYNTSKWTLKSLYQTASNTPQYMLANFEEYLDGFSTNVHEIINCFKLREQIRHMSHKNVLLSVLEKFVSPYINLTPKE QQDPEGNKLPALTNLGMGYVFEELIRKFNEENNEEAGEHFTPREVIELMTHLVFDPLKDQIPAIITIYDPACGSGGMLTE SQNFIEQKYPLSESQGERSIFLFGKETNDETYAICKSDMMIKGDNPENIKVGSTLATDSFQGNHFDFMLSNPPYGKSWSK DQAYIKDGNEVIDSRFKVTLPDYWGNEETLDATPRSSDGQLLFLMEMVNKMKSPKNNKIGSRVASVHNGSSLFTGDAGSG ESNIRRHIIENDLLEAIVQLPNNLFYNTGITTYIWLLSNNKPEARKGKVQLIDASLLFRKLRKNLGDKNCEFAPEHIAEI TQNYLDFTAKARETDSQNEAVGLASQIFDNQDFGYYKVTIERPDRRSAQFTAENIAPLRFDKALFEPMQYLYQQHGEQIY NAGFLAKTEPEISTWCEAQGIALNNKNKAKLLDVKTWEKAAALFQTASKLLEHFGSTQFDDFNQFKQAVEGRLKAEKIPL SATEKKAIFNAVSWYDENAAKVIAKTLKLKPNELDALCQRYQCQADELADFGYYATGKAGEYIQYETSSDLRDSESIPLK QNIHDYFKAEVQPHISEAWLNMESVKIGYEISFNKYFYRHKSLRSLEEVTQDILALEKQADGLISEILEA
Specific function: Methylation of specific adenine residues; required for both restriction and modification activities [H]
COG id: COG0286
COG function: function code V; Type I restriction-modification system methyltransferase subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022749 - InterPro: IPR003356 - InterPro: IPR002052 - InterPro: IPR002296 [H]
Pfam domain/function: PF12161 HsdM_N; PF02384 N6_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 90387; Mature: 90387
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDHSVHNKLVSFIWSIADDCLRDVYVRGKYRDVILPMFVLRRLDTLLEPSKDAVLEEMRF CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH QKEELAFTELDDLPLKKITGHVFYNTSKWTLKSLYQTASNTPQYMLANFEEYLDGFSTNV HHHHHHHHHCCCCCHHHHCCEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCH HEIINCFKLREQIRHMSHKNVLLSVLEKFVSPYINLTPKEQQDPEGNKLPALTNLGMGYV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCHHHH FEELIRKFNEENNEEAGEHFTPREVIELMTHLVFDPLKDQIPAIITIYDPACGSGGMLTE HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC SQNFIEQKYPLSESQGERSIFLFGKETNDETYAICKSDMMIKGDNPENIKVGSTLATDSF CHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEECCCEEEECCCCCCEEECCEEECCCC QGNHFDFMLSNPPYGKSWSKDQAYIKDGNEVIDSRFKVTLPDYWGNEETLDATPRSSDGQ CCCCEEEEECCCCCCCCCCCCCHHHHCCHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCC LLFLMEMVNKMKSPKNNKIGSRVASVHNGSSLFTGDAGSGESNIRRHIIENDLLEAIVQL EEEHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHC PNNLFYNTGITTYIWLLSNNKPEARKGKVQLIDASLLFRKLRKNLGDKNCEFAPEHIAEI CCCEEECCCCEEEEEEEECCCCCCCCCCEEEECHHHHHHHHHHHCCCCCCCCCHHHHHHH TQNYLDFTAKARETDSQNEAVGLASQIFDNQDFGYYKVTIERPDRRSAQFTAENIAPLRF HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHCCCCHHH DKALFEPMQYLYQQHGEQIYNAGFLAKTEPEISTWCEAQGIALNNKNKAKLLDVKTWEKA HHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCHHHHHCCCCEEECCCCCCEEEECHHHHHH AALFQTASKLLEHFGSTQFDDFNQFKQAVEGRLKAEKIPLSATEKKAIFNAVSWYDENAA HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHCCHHH KVIAKTLKLKPNELDALCQRYQCQADELADFGYYATGKAGEYIQYETSSDLRDSESIPLK HHHHHHHCCCCCHHHHHHHHHCCCHHHHHHCCCEECCCCCCEEEECCCCCCCCCCCCCHH QNIHDYFKAEVQPHISEAWLNMESVKIGYEISFNKYFYRHKSLRSLEEVTQDILALEKQA HHHHHHHHHHCCCCHHHHHCCHHHEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH DGLISEILEA HHHHHHHHCC >Mature Secondary Structure MDHSVHNKLVSFIWSIADDCLRDVYVRGKYRDVILPMFVLRRLDTLLEPSKDAVLEEMRF CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH QKEELAFTELDDLPLKKITGHVFYNTSKWTLKSLYQTASNTPQYMLANFEEYLDGFSTNV HHHHHHHHHCCCCCHHHHCCEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCH HEIINCFKLREQIRHMSHKNVLLSVLEKFVSPYINLTPKEQQDPEGNKLPALTNLGMGYV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCHHHH FEELIRKFNEENNEEAGEHFTPREVIELMTHLVFDPLKDQIPAIITIYDPACGSGGMLTE HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC SQNFIEQKYPLSESQGERSIFLFGKETNDETYAICKSDMMIKGDNPENIKVGSTLATDSF CHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEECCCEEEECCCCCCEEECCEEECCCC QGNHFDFMLSNPPYGKSWSKDQAYIKDGNEVIDSRFKVTLPDYWGNEETLDATPRSSDGQ CCCCEEEEECCCCCCCCCCCCCHHHHCCHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCC LLFLMEMVNKMKSPKNNKIGSRVASVHNGSSLFTGDAGSGESNIRRHIIENDLLEAIVQL EEEHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHC PNNLFYNTGITTYIWLLSNNKPEARKGKVQLIDASLLFRKLRKNLGDKNCEFAPEHIAEI CCCEEECCCCEEEEEEEECCCCCCCCCCEEEECHHHHHHHHHHHCCCCCCCCCHHHHHHH TQNYLDFTAKARETDSQNEAVGLASQIFDNQDFGYYKVTIERPDRRSAQFTAENIAPLRF HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHCCCCHHH DKALFEPMQYLYQQHGEQIYNAGFLAKTEPEISTWCEAQGIALNNKNKAKLLDVKTWEKA HHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCHHHHHCCCCEEECCCCCCEEEECHHHHHH AALFQTASKLLEHFGSTQFDDFNQFKQAVEGRLKAEKIPLSATEKKAIFNAVSWYDENAA HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHCCHHH KVIAKTLKLKPNELDALCQRYQCQADELADFGYYATGKAGEYIQYETSSDLRDSESIPLK HHHHHHHCCCCCHHHHHHHHHCCCHHHHHHCCCEECCCCCCEEEECCCCCCCCCCCCCHH QNIHDYFKAEVQPHISEAWLNMESVKIGYEISFNKYFYRHKSLRSLEEVTQDILALEKQA HHHHHHHHHHCCCCHHHHHCCHHHEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH DGLISEILEA HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]