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The map label for this gene is yjmB [H]

Identifier: 148827204

GI number: 148827204

Start: 503234

End: 504637

Strand: Reverse

Name: yjmB [H]

Synonym: CGSHiGG_02745

Alternate gene names: 148827204

Gene position: 504637-503234 (Counterclockwise)

Preceding gene: 148827205

Following gene: 148827203

Centisome position: 26.74

GC content: 33.12

Gene sequence:

>1404_bases
ATGAACACATTAGAATCAAGACCTTTTGGTCTCAAAGATAAAATTGCCTATATGACAGGTGACATCGCAAATGATATGAG
CTTTATGATGTCAGCTTTTTTTCTTATGCTATTTTATACCAATGTATTAGAAATTCCAGGGTATGTTGTTGGGTTACTCT
TCTTAATATCACGTGTATTAGATGCTTTTACTGATATGGGAATGGGACGTTTAGTTGATACTATGAAGCCTTTTAAAGAA
GGGCGCTTTAAAGGAATAATTAGACGTGCTTCACCATTTGTCTGTTTATCTGGTTTCTTGCTATTTCTTTATGTTGTAAA
AGATTGGTCATATCCAGCCAAATTAACTTATGTGAGCATTACTTATATTATCTGGGGGAGTTTCTGTTACACTGCGGTTA
ATATTCCTTATGGCTCAATGGCAAGCGTTATCAGTAGTTGTCCTGAAGATCGTGCTTCTCTATCTGTATTCCGTTCGATT
GGTGCTAATATTGCACTATTAACAATTTCTTTTATTGTTCCGTTATTGATTTATAAAAATGTGGATGGTAAACAAATTAT
TATTCCAGAGATGTTTACTATTATTATGGGTGTTTTAATGCTCATCGCATTCTATTTGTATCAATTCTGCTGGAGAAATT
CAGTTGAGCGCATTCAATTGCCAGAAAAAGTAGGGCGCAGACATAATAGAAATGAGTGTTTTGGAGATGTCAAAGCTATT
TTTGTTAGTCTTTTTTCAAATAAACCATTACAAATTTTTATTTTAATTGCCATCATTTTACTATTAGCTAATTTACTTAT
CGGTGCAATGAATCCATACCTTTATATTGATTACTTTAATAGTAAATTTGCATTATCTATTGGTGGAACATTACCTGTCA
TTGCTTCTTTCTGTGTTGCACCGTTTGCACAAACCTTGGTGAAAAAATTTGGTAAAAAAGAATCAGCATCGATTGCTTTA
TTGCTCACTGGAATTGGATATTTTATTCTATTCGGAGTTAAAACAACCGATGTATGGTTATATATGGCAATTGCTTTCGT
TTCTTTATTGGGACTCAATTATTTTATGGTGATTATTTGGGCGTTTATTACTGATATTATTGATTACCAATTCCTGAAAA
CACATCGCCGTGAAGATGGTACTATTTATGCGGTATATTCTTTTGCACGTAAAATTGGACAAGCACTTGCAGGCGGATTA
GGTGGTGTTGCATTAAGTTTGGTAGGTTATATGCCTAATGTGCCAAGTCAATCAAGTGAAACTCTGAATTCAATTTATAA
TGTTGCAACGTTGGTTCCTGCAATCTCTTGCATTGCAATTTTTGTTATTTTAACTTTCTGGTATCCACTTTCAAAAGAAG
TTGTCGATAATAATTCTCGTGAATTGGAGAAAATAAATAAATAA

Upstream 100 bases:

>100_bases
AGAAAAATTAATGGGCTATTCTGATTTTAAAGGCGTAAGCCCGGTTGATGCATATTGTGGGTTTAAAGATACTTATATTT
AACCATACAAGGATAAATTT

Downstream 100 bases:

>100_bases
TAATCTATCCCCTCTTTTAGAGGGGAATCTCCTTCTTCTTATTTACAGAATCATTCAAAGGTAACATTATGAAATCATTT
ATGGATGAAAATTTCCTTCT

Product: glucuronide permease

Products: Proton [Cytoplasm]; Glucuronides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 467; Mature: 467

Protein sequence:

>467_residues
MNTLESRPFGLKDKIAYMTGDIANDMSFMMSAFFLMLFYTNVLEIPGYVVGLLFLISRVLDAFTDMGMGRLVDTMKPFKE
GRFKGIIRRASPFVCLSGFLLFLYVVKDWSYPAKLTYVSITYIIWGSFCYTAVNIPYGSMASVISSCPEDRASLSVFRSI
GANIALLTISFIVPLLIYKNVDGKQIIIPEMFTIIMGVLMLIAFYLYQFCWRNSVERIQLPEKVGRRHNRNECFGDVKAI
FVSLFSNKPLQIFILIAIILLLANLLIGAMNPYLYIDYFNSKFALSIGGTLPVIASFCVAPFAQTLVKKFGKKESASIAL
LLTGIGYFILFGVKTTDVWLYMAIAFVSLLGLNYFMVIIWAFITDIIDYQFLKTHRREDGTIYAVYSFARKIGQALAGGL
GGVALSLVGYMPNVPSQSSETLNSIYNVATLVPAISCIAIFVILTFWYPLSKEVVDNNSRELEKINK

Sequences:

>Translated_467_residues
MNTLESRPFGLKDKIAYMTGDIANDMSFMMSAFFLMLFYTNVLEIPGYVVGLLFLISRVLDAFTDMGMGRLVDTMKPFKE
GRFKGIIRRASPFVCLSGFLLFLYVVKDWSYPAKLTYVSITYIIWGSFCYTAVNIPYGSMASVISSCPEDRASLSVFRSI
GANIALLTISFIVPLLIYKNVDGKQIIIPEMFTIIMGVLMLIAFYLYQFCWRNSVERIQLPEKVGRRHNRNECFGDVKAI
FVSLFSNKPLQIFILIAIILLLANLLIGAMNPYLYIDYFNSKFALSIGGTLPVIASFCVAPFAQTLVKKFGKKESASIAL
LLTGIGYFILFGVKTTDVWLYMAIAFVSLLGLNYFMVIIWAFITDIIDYQFLKTHRREDGTIYAVYSFARKIGQALAGGL
GGVALSLVGYMPNVPSQSSETLNSIYNVATLVPAISCIAIFVILTFWYPLSKEVVDNNSRELEKINK
>Mature_467_residues
MNTLESRPFGLKDKIAYMTGDIANDMSFMMSAFFLMLFYTNVLEIPGYVVGLLFLISRVLDAFTDMGMGRLVDTMKPFKE
GRFKGIIRRASPFVCLSGFLLFLYVVKDWSYPAKLTYVSITYIIWGSFCYTAVNIPYGSMASVISSCPEDRASLSVFRSI
GANIALLTISFIVPLLIYKNVDGKQIIIPEMFTIIMGVLMLIAFYLYQFCWRNSVERIQLPEKVGRRHNRNECFGDVKAI
FVSLFSNKPLQIFILIAIILLLANLLIGAMNPYLYIDYFNSKFALSIGGTLPVIASFCVAPFAQTLVKKFGKKESASIAL
LLTGIGYFILFGVKTTDVWLYMAIAFVSLLGLNYFMVIIWAFITDIIDYQFLKTHRREDGTIYAVYSFARKIGQALAGGL
GGVALSLVGYMPNVPSQSSETLNSIYNVATLVPAISCIAIFVILTFWYPLSKEVVDNNSRELEKINK

Specific function: Unknown

COG id: COG2211

COG function: function code G; Na+/melibiose symporter and related transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:galactoside symporter (TC 2.A.2) family [H]

Homologues:

Organism=Escherichia coli, GI1787902, Length=468, Percent_Identity=28.8461538461538, Blast_Score=176, Evalue=4e-45,
Organism=Escherichia coli, GI48994989, Length=475, Percent_Identity=27.3684210526316, Blast_Score=158, Evalue=9e-40,
Organism=Escherichia coli, GI145693206, Length=473, Percent_Identity=28.1183932346723, Blast_Score=152, Evalue=6e-38,
Organism=Escherichia coli, GI1786466, Length=463, Percent_Identity=28.0777537796976, Blast_Score=140, Evalue=2e-34,
Organism=Escherichia coli, GI87082306, Length=477, Percent_Identity=27.4633123689727, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI1790561, Length=471, Percent_Identity=25.2653927813163, Blast_Score=97, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR001927
- InterPro:   IPR018043 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 52408; Mature: 52408

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHCCC
>Mature Secondary Structure
MNTLESRPFGLKDKIAYMTGDIANDMSFMMSAFFLMLFYTNVLEIPGYVVGLLFLISRVL
CCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
DAFTDMGMGRLVDTMKPFKEGRFKGIIRRASPFVCLSGFLLFLYVVKDWSYPAKLTYVSI
HHHHCCCHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEHHHHH
TYIIWGSFCYTAVNIPYGSMASVISSCPEDRASLSVFRSIGANIALLTISFIVPLLIYKN
HHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
VDGKQIIIPEMFTIIMGVLMLIAFYLYQFCWRNSVERIQLPEKVGRRHNRNECFGDVKAI
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHCCCCCCHHHHHHHHHH
FVSLFSNKPLQIFILIAIILLLANLLIGAMNPYLYIDYFNSKFALSIGGTLPVIASFCVA
HHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEECCHHHHHHHHHHH
PFAQTLVKKFGKKESASIALLLTGIGYFILFGVKTTDVWLYMAIAFVSLLGLNYFMVIIW
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AFITDIIDYQFLKTHRREDGTIYAVYSFARKIGQALAGGLGGVALSLVGYMPNVPSQSSE
HHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHH
TLNSIYNVATLVPAISCIAIFVILTFWYPLSKEVVDNNSRELEKINK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; Glucuronides [Periplasm] [C]

Specific reaction: Proton [Periplasm] + Glucuronides [Periplasm] = Proton [Cytoplasm] + Glucuronides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]