BacMap

Definition	Haemophilus influenzae PittGG chromosome, complete genome.
Accession	NC_009567
Length	1,887,192

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The map label for this gene is 148827113

Identifier: 148827113

GI number: 148827113

Start: 389198

End: 390571

Strand: Direct

Name: 148827113

Synonym: CGSHiGG_02190

Alternate gene names: NA

Gene position: 389198-390571 (Clockwise)

Preceding gene: 148827112

Following gene: 148827117

Centisome position: 20.62

GC content: 37.41

Gene sequence:

>1374_bases
ATGACAACAAATAATAAACAGCGACAAACTTGGTCTAGCCGCCTCACTTATGTAATGACGGTCGCAGGCGCAACTGTCGG
TTTCGGTGCAACTTGGCGTTTCCCTTATCTTGTGGGTGAAAATGGTGGCGGTGCTTACGTTTTACTTTTCTGTATCGCAA
TGATTGTAATCGGCATCCCAATGATTTTAGTTGAAAACGTGATAGGTCGCCGCTTACGTGTAAATTCCATTGATGCATTC
GGCGATAAAATTCTCGACAAAGGAAAAGGCATTTCTAAATATTGGAAAATATTAGGTTATATGGGCTTACTCGGTGCATT
TGGCATTATGGCGTATTATATGGTGCTTGGTGGCTGGGTTATTTCTTATATCATTAGCCTAATCAGCGGTACATTAGACA
TTTCAACCCCCATCACAAAAGACATTGCCAAAAATTTCTACGATCTTCACATCGGCAATAGCCCTTATGAAATTATATTC
TATACCCTCTTATTTGTTATCGTGAATTACATTATCTTGGCAAAAGGTATCATTGGTGGAATTGAACGTTCAGTAAAATA
TTTAATGCCACTGCTATTTATCTTCTTAATTGGAATGGTAATTCGCAACGTAACATTACCGGGTGCAATGGAAGGCATTA
CATTCTATTTAAAACCAGATTTCAGCAAAATTACCCCACAATTATTTATCTTTGTTTTAGGGCAAGTCTTCTTCGCATTA
AGCCTTGGTTTTGGTGTATTAATTACCCTTTCCAGTTACTTAAATAAAGAAGAAAACTTAATCCACACCGCCGTAATTAC
AGGTTTCACCAACACAATTATCGCCGTACTTGCTGGCTTTATGATTTTCCCCTCACTTTTCACTTTTGGGATTGAACCAA
ATGCAGGGCCAACTTTAGTATTCCAAAGTTTACCTATCGTATTTTCTCACTTATGGGCAGGTAAATTCTTTGCAATTATT
TTCTTCGGCTTATTATTAATTGCTGCGCTGACTACTTCCATCACAATTTATGAAGTGATCATTACAGCATTACAAGAAAA
GCTCAGAATGCGCCGTGGCAAAGCCATTGTCTTAACCCTTAGTGGCATTTTTCTATTAGGCAATACCCCTGCAATTTTAG
GCGATAATCTATGGAAAAACGTAACCATTTTCGGCAAAAGCATTTTTGATTTCTACGATTACGCCAGTGGAAATATTCTC
TTTATGCTGACCGCACTTGGCTGTGCTATTTTCGTTGGTTTCGTGTTAAAAGATGAAGCCAAAAAAGAACTTTCTTCAAC
AAAATATTCAACTTTCATCAAAATTTGGTTTAACTACGTGAAATTTGTTGTACCCTTGATCATCTTAGTTATCTTTATCA
GCAACCTGTTCTAA

Upstream 100 bases:

>100_bases
ATCGAAGATCTTTGTGAATATAAAGAAAAAGTTGAATTTTAATTTTGCGGTAAAACAGCCTCATTATTTACCGCACTTTT
TATTAAAAATAGGATAAAAA

Downstream 100 bases:

>100_bases
AAATTAAAAATGCGGTAAGGCGACTACATTACCGACACCGCTTTAATTTGAACATAAACATCTTGCCCAATAGCAAAACG
CAGTTCATTTTGCGCCCATT

Product: SoxR-reducing system protein RsxE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 457; Mature: 456

Protein sequence:

>457_residues
MTTNNKQRQTWSSRLTYVMTVAGATVGFGATWRFPYLVGENGGGAYVLLFCIAMIVIGIPMILVENVIGRRLRVNSIDAF
GDKILDKGKGISKYWKILGYMGLLGAFGIMAYYMVLGGWVISYIISLISGTLDISTPITKDIAKNFYDLHIGNSPYEIIF
YTLLFVIVNYIILAKGIIGGIERSVKYLMPLLFIFLIGMVIRNVTLPGAMEGITFYLKPDFSKITPQLFIFVLGQVFFAL
SLGFGVLITLSSYLNKEENLIHTAVITGFTNTIIAVLAGFMIFPSLFTFGIEPNAGPTLVFQSLPIVFSHLWAGKFFAII
FFGLLLIAALTTSITIYEVIITALQEKLRMRRGKAIVLTLSGIFLLGNTPAILGDNLWKNVTIFGKSIFDFYDYASGNIL
FMLTALGCAIFVGFVLKDEAKKELSSTKYSTFIKIWFNYVKFVVPLIILVIFISNLF

Sequences:

>Translated_457_residues
MTTNNKQRQTWSSRLTYVMTVAGATVGFGATWRFPYLVGENGGGAYVLLFCIAMIVIGIPMILVENVIGRRLRVNSIDAF
GDKILDKGKGISKYWKILGYMGLLGAFGIMAYYMVLGGWVISYIISLISGTLDISTPITKDIAKNFYDLHIGNSPYEIIF
YTLLFVIVNYIILAKGIIGGIERSVKYLMPLLFIFLIGMVIRNVTLPGAMEGITFYLKPDFSKITPQLFIFVLGQVFFAL
SLGFGVLITLSSYLNKEENLIHTAVITGFTNTIIAVLAGFMIFPSLFTFGIEPNAGPTLVFQSLPIVFSHLWAGKFFAII
FFGLLLIAALTTSITIYEVIITALQEKLRMRRGKAIVLTLSGIFLLGNTPAILGDNLWKNVTIFGKSIFDFYDYASGNIL
FMLTALGCAIFVGFVLKDEAKKELSSTKYSTFIKIWFNYVKFVVPLIILVIFISNLF
>Mature_456_residues
TTNNKQRQTWSSRLTYVMTVAGATVGFGATWRFPYLVGENGGGAYVLLFCIAMIVIGIPMILVENVIGRRLRVNSIDAFG
DKILDKGKGISKYWKILGYMGLLGAFGIMAYYMVLGGWVISYIISLISGTLDISTPITKDIAKNFYDLHIGNSPYEIIFY
TLLFVIVNYIILAKGIIGGIERSVKYLMPLLFIFLIGMVIRNVTLPGAMEGITFYLKPDFSKITPQLFIFVLGQVFFALS
LGFGVLITLSSYLNKEENLIHTAVITGFTNTIIAVLAGFMIFPSLFTFGIEPNAGPTLVFQSLPIVFSHLWAGKFFAIIF
FGLLLIAALTTSITIYEVIITALQEKLRMRRGKAIVLTLSGIFLLGNTPAILGDNLWKNVTIFGKSIFDFYDYASGNILF
MLTALGCAIFVGFVLKDEAKKELSSTKYSTFIKIWFNYVKFVVPLIILVIFISNLF

Specific function: Putative sodium-dependent transporter [H]

COG id: COG0733

COG function: function code R; Na+-dependent transporters of the SNF family

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family [H]

Homologues:

Organism=Homo sapiens, GI188528618, Length=495, Percent_Identity=26.8686868686869, Blast_Score=151, Evalue=2e-36,
Organism=Homo sapiens, GI4507043, Length=409, Percent_Identity=29.0953545232274, Blast_Score=146, Evalue=4e-35,
Organism=Homo sapiens, GI21361581, Length=455, Percent_Identity=25.7142857142857, Blast_Score=132, Evalue=6e-31,
Organism=Homo sapiens, GI171184408, Length=459, Percent_Identity=25.7080610021786, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI171184406, Length=459, Percent_Identity=25.7080610021786, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI171184404, Length=459, Percent_Identity=25.7080610021786, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI289191351, Length=406, Percent_Identity=27.8325123152709, Blast_Score=131, Evalue=2e-30,
Organism=Homo sapiens, GI4557046, Length=406, Percent_Identity=27.8325123152709, Blast_Score=131, Evalue=2e-30,
Organism=Homo sapiens, GI289191377, Length=406, Percent_Identity=27.5862068965517, Blast_Score=130, Evalue=3e-30,
Organism=Homo sapiens, GI7657587, Length=462, Percent_Identity=25.974025974026, Blast_Score=128, Evalue=9e-30,
Organism=Homo sapiens, GI33354281, Length=304, Percent_Identity=29.6052631578947, Blast_Score=126, Evalue=4e-29,
Organism=Homo sapiens, GI58219014, Length=407, Percent_Identity=27.7641277641278, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI4507041, Length=510, Percent_Identity=24.7058823529412, Blast_Score=122, Evalue=6e-28,
Organism=Homo sapiens, GI51468073, Length=299, Percent_Identity=29.0969899665552, Blast_Score=122, Evalue=6e-28,
Organism=Homo sapiens, GI92859670, Length=432, Percent_Identity=27.5462962962963, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI5032097, Length=511, Percent_Identity=25.440313111546, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI134304856, Length=394, Percent_Identity=27.9187817258883, Blast_Score=116, Evalue=3e-26,
Organism=Homo sapiens, GI197276623, Length=456, Percent_Identity=26.7543859649123, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI54607094, Length=456, Percent_Identity=26.7543859649123, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI194018524, Length=302, Percent_Identity=27.4834437086093, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI218563756, Length=504, Percent_Identity=25.1984126984127, Blast_Score=112, Evalue=1e-24,
Organism=Homo sapiens, GI11181770, Length=302, Percent_Identity=27.1523178807947, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI67782317, Length=396, Percent_Identity=26.2626262626263, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI67782313, Length=396, Percent_Identity=26.2626262626263, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI67782315, Length=396, Percent_Identity=26.2626262626263, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI12408638, Length=280, Percent_Identity=26.0714285714286, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI289191353, Length=239, Percent_Identity=30.1255230125523, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI21361693, Length=151, Percent_Identity=33.112582781457, Blast_Score=86, Evalue=9e-17,
Organism=Homo sapiens, GI300360519, Length=278, Percent_Identity=27.6978417266187, Blast_Score=86, Evalue=9e-17,
Organism=Homo sapiens, GI6005715, Length=203, Percent_Identity=30.0492610837438, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI218563758, Length=271, Percent_Identity=27.6752767527675, Blast_Score=73, Evalue=5e-13,
Organism=Homo sapiens, GI226437581, Length=254, Percent_Identity=26.3779527559055, Blast_Score=73, Evalue=6e-13,
Organism=Homo sapiens, GI197276625, Length=126, Percent_Identity=33.3333333333333, Blast_Score=70, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17555248, Length=403, Percent_Identity=28.287841191067, Blast_Score=137, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI25146584, Length=418, Percent_Identity=26.0765550239234, Blast_Score=124, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI17554804, Length=495, Percent_Identity=25.0505050505051, Blast_Score=101, Evalue=7e-22,
Organism=Caenorhabditis elegans, GI17569475, Length=419, Percent_Identity=22.9116945107399, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI133952791, Length=277, Percent_Identity=29.2418772563177, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI71995588, Length=192, Percent_Identity=29.1666666666667, Blast_Score=75, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI71998244, Length=404, Percent_Identity=24.5049504950495, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI45550877, Length=430, Percent_Identity=28.3720930232558, Blast_Score=146, Evalue=3e-35,
Organism=Drosophila melanogaster, GI45551183, Length=430, Percent_Identity=28.3720930232558, Blast_Score=145, Evalue=4e-35,
Organism=Drosophila melanogaster, GI24762620, Length=506, Percent_Identity=28.0632411067194, Blast_Score=143, Evalue=3e-34,
Organism=Drosophila melanogaster, GI24661428, Length=506, Percent_Identity=26.0869565217391, Blast_Score=128, Evalue=9e-30,
Organism=Drosophila melanogaster, GI17136952, Length=384, Percent_Identity=24.7395833333333, Blast_Score=127, Evalue=2e-29,
Organism=Drosophila melanogaster, GI281364394, Length=384, Percent_Identity=24.21875, Blast_Score=123, Evalue=3e-28,
Organism=Drosophila melanogaster, GI28574704, Length=384, Percent_Identity=24.21875, Blast_Score=123, Evalue=3e-28,
Organism=Drosophila melanogaster, GI17136950, Length=384, Percent_Identity=24.21875, Blast_Score=123, Evalue=3e-28,
Organism=Drosophila melanogaster, GI28574702, Length=384, Percent_Identity=24.21875, Blast_Score=123, Evalue=3e-28,
Organism=Drosophila melanogaster, GI19921936, Length=413, Percent_Identity=24.2130750605327, Blast_Score=120, Evalue=2e-27,
Organism=Drosophila melanogaster, GI24652942, Length=390, Percent_Identity=24.8717948717949, Blast_Score=120, Evalue=2e-27,
Organism=Drosophila melanogaster, GI45551088, Length=390, Percent_Identity=24.8717948717949, Blast_Score=119, Evalue=3e-27,
Organism=Drosophila melanogaster, GI281363702, Length=405, Percent_Identity=24.9382716049383, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24639516, Length=300, Percent_Identity=26, Blast_Score=109, Evalue=3e-24,
Organism=Drosophila melanogaster, GI221329674, Length=300, Percent_Identity=26, Blast_Score=109, Evalue=3e-24,
Organism=Drosophila melanogaster, GI24639514, Length=300, Percent_Identity=26, Blast_Score=109, Evalue=4e-24,
Organism=Drosophila melanogaster, GI24655079, Length=302, Percent_Identity=26.8211920529801, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24582567, Length=436, Percent_Identity=24.3119266055046, Blast_Score=106, Evalue=3e-23,
Organism=Drosophila melanogaster, GI281365034, Length=401, Percent_Identity=24.6882793017456, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI19921352, Length=399, Percent_Identity=25.31328320802, Blast_Score=102, Evalue=5e-22,
Organism=Drosophila melanogaster, GI24584353, Length=399, Percent_Identity=25.31328320802, Blast_Score=102, Evalue=5e-22,
Organism=Drosophila melanogaster, GI281363700, Length=311, Percent_Identity=26.0450160771704, Blast_Score=101, Evalue=9e-22,
Organism=Drosophila melanogaster, GI24654186, Length=235, Percent_Identity=33.1914893617021, Blast_Score=99, Evalue=5e-21,
Organism=Drosophila melanogaster, GI24639853, Length=433, Percent_Identity=22.6327944572748, Blast_Score=92, Evalue=8e-19,
Organism=Drosophila melanogaster, GI281364136, Length=209, Percent_Identity=32.5358851674641, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24582569, Length=395, Percent_Identity=23.2911392405063, Blast_Score=69, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000175 [H]

Pfam domain/function: PF00209 SNF [H]

EC number: NA

Molecular weight: Translated: 50798; Mature: 50666

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: PS00610 NA_NEUROTRAN_SYMP_1 ; PS50267 NA_NEUROTRAN_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTNNKQRQTWSSRLTYVMTVAGATVGFGATWRFPYLVGENGGGAYVLLFCIAMIVIGIP
CCCCCHHHHHHHHHHHHHHEECCCCCCCCCEEECCEEEECCCCCHHHHHHHHHHHHHHHH
MILVENVIGRRLRVNSIDAFGDKILDKGKGISKYWKILGYMGLLGAFGIMAYYMVLGGWV
HHHHHHHHCCCEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISYIISLISGTLDISTPITKDIAKNFYDLHIGNSPYEIIFYTLLFVIVNYIILAKGIIGG
HHHHHHHHHCCCCCCCCHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IERSVKYLMPLLFIFLIGMVIRNVTLPGAMEGITFYLKPDFSKITPQLFIFVLGQVFFAL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCEEEEECCCHHHHHHHHHHHHHHHHHHHH
SLGFGVLITLSSYLNKEENLIHTAVITGFTNTIIAVLAGFMIFPSLFTFGIEPNAGPTLV
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
FQSLPIVFSHLWAGKFFAIIFFGLLLIAALTTSITIYEVIITALQEKLRMRRGKAIVLTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
SGIFLLGNTPAILGDNLWKNVTIFGKSIFDFYDYASGNILFMLTALGCAIFVGFVLKDEA
ECEEEECCCCHHHCCHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
KKELSSTKYSTFIKIWFNYVKFVVPLIILVIFISNLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TTNNKQRQTWSSRLTYVMTVAGATVGFGATWRFPYLVGENGGGAYVLLFCIAMIVIGIP
CCCCHHHHHHHHHHHHHHEECCCCCCCCCEEECCEEEECCCCCHHHHHHHHHHHHHHHH
MILVENVIGRRLRVNSIDAFGDKILDKGKGISKYWKILGYMGLLGAFGIMAYYMVLGGWV
HHHHHHHHCCCEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISYIISLISGTLDISTPITKDIAKNFYDLHIGNSPYEIIFYTLLFVIVNYIILAKGIIGG
HHHHHHHHHCCCCCCCCHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IERSVKYLMPLLFIFLIGMVIRNVTLPGAMEGITFYLKPDFSKITPQLFIFVLGQVFFAL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCEEEEECCCHHHHHHHHHHHHHHHHHHHH
SLGFGVLITLSSYLNKEENLIHTAVITGFTNTIIAVLAGFMIFPSLFTFGIEPNAGPTLV
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
FQSLPIVFSHLWAGKFFAIIFFGLLLIAALTTSITIYEVIITALQEKLRMRRGKAIVLTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
SGIFLLGNTPAILGDNLWKNVTIFGKSIFDFYDYASGNILFMLTALGCAIFVGFVLKDEA
ECEEEECCCCHHHCCHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
KKELSSTKYSTFIKIWFNYVKFVVPLIILVIFISNLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]