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The map label for this gene is yccT [C]

Identifier: 148827105

GI number: 148827105

Start: 380396

End: 381061

Strand: Reverse

Name: yccT [C]

Synonym: CGSHiGG_02140

Alternate gene names: 148827105

Gene position: 381061-380396 (Counterclockwise)

Preceding gene: 148827114

Following gene: 148827104

Centisome position: 20.19

GC content: 38.14

Gene sequence:

>666_bases
ATGAAATTACGCGCTGTTGTATTAGGTCTTGCCACATTATGCACAAGTACGGCAACCTTTGCTGGAATGGTTTCTACGTC
ATCTAACCTTGAGTTTTTAGCGATTGATGGTCAAAAAGCCTCTAAATCTCTCGGAAAAGCTAAGACATTTACTGTAGATG
ATACCCAAAGCCATCAGGTTGTTGTGCGTTTAAATGAAATTGTTGGTTCAGGATCGAATCAATCTCTTTTTGAATCTAAT
CCTGTGATTGTGACATTTCAAGGTAATGCTGAAGATTTAGTTATTTCCGCACCAGCTATTCGTAATCTTGATAGTGGCGA
TAAATTCAATCAAATGCCAAATATTACTGTGAAAACAAAATCAGGTAATGCTATTTCAGCGAAAGTGGATGTGTTAAAAC
AAGAAGGTTTATTCCCAAGTGGTAATGTGCTAAATGATCTTGCTGAATATAATGCGTCTGGTGCAGTGGCATCAGTTTCT
AAATTTACTGCAACAACTTCTGCTAATTCAATGGTTGCTGCGCCAGCAGGTAATGCAAAAGCGAATAAAGGAAAAGTGGT
TGTTCAGGGCGAAAACGTTGCAGAGCAACAGCTTCAATATTGGTTCCAACAAGCGGATAAAGAAACTCAAACACGTTTCT
TAAACTGGGCAAAATCCCATAAATAA

Upstream 100 bases:

>100_bases
TTATAACAAAAAATTTTAAATTAATTCTTACTTTTTATTTTCATTTTGGCTAATTTGGCATAGCATAAGCGAGTATTTCA
TTTATACCAAAGGAGCAATT

Downstream 100 bases:

>100_bases
TGACCGCACTTTATACAATAAAAAGTGAGCCTTGTTGCTCACTTTTCTATTTTGATAAGGATTTGAAATGAATATTCGGT
TAAATGCTAAAGTAATTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MKLRAVVLGLATLCTSTATFAGMVSTSSNLEFLAIDGQKASKSLGKAKTFTVDDTQSHQVVVRLNEIVGSGSNQSLFESN
PVIVTFQGNAEDLVISAPAIRNLDSGDKFNQMPNITVKTKSGNAISAKVDVLKQEGLFPSGNVLNDLAEYNASGAVASVS
KFTATTSANSMVAAPAGNAKANKGKVVVQGENVAEQQLQYWFQQADKETQTRFLNWAKSHK

Sequences:

>Translated_221_residues
MKLRAVVLGLATLCTSTATFAGMVSTSSNLEFLAIDGQKASKSLGKAKTFTVDDTQSHQVVVRLNEIVGSGSNQSLFESN
PVIVTFQGNAEDLVISAPAIRNLDSGDKFNQMPNITVKTKSGNAISAKVDVLKQEGLFPSGNVLNDLAEYNASGAVASVS
KFTATTSANSMVAAPAGNAKANKGKVVVQGENVAEQQLQYWFQQADKETQTRFLNWAKSHK
>Mature_221_residues
MKLRAVVLGLATLCTSTATFAGMVSTSSNLEFLAIDGQKASKSLGKAKTFTVDDTQSHQVVVRLNEIVGSGSNQSLFESN
PVIVTFQGNAEDLVISAPAIRNLDSGDKFNQMPNITVKTKSGNAISAKVDVLKQEGLFPSGNVLNDLAEYNASGAVASVS
KFTATTSANSMVAAPAGNAKANKGKVVVQGENVAEQQLQYWFQQADKETQTRFLNWAKSHK

Specific function: Unknown

COG id: COG3110

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0319 family [H]

Homologues:

Organism=Escherichia coli, GI1787198, Length=215, Percent_Identity=26.5116279069767, Blast_Score=92, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018635 [H]

Pfam domain/function: PF09829 DUF2057 [H]

EC number: NA

Molecular weight: Translated: 23446; Mature: 23446

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLRAVVLGLATLCTSTATFAGMVSTSSNLEFLAIDGQKASKSLGKAKTFTVDDTQSHQV
CCHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEECCCHHHHHCCCCEEEEECCCCCCEE
VVRLNEIVGSGSNQSLFESNPVIVTFQGNAEDLVISAPAIRNLDSGDKFNQMPNITVKTK
EEEEEHHHCCCCCCCEECCCCEEEEEECCCCEEEEECCHHCCCCCCCCHHCCCCEEEEEC
SGNAISAKVDVLKQEGLFPSGNVLNDLAEYNASGAVASVSKFTATTSANSMVAAPAGNAK
CCCEEEHHEEHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHEEECCCCCEEECCCCCCC
ANKGKVVVQGENVAEQQLQYWFQQADKETQTRFLNWAKSHK
CCCCEEEEECCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLRAVVLGLATLCTSTATFAGMVSTSSNLEFLAIDGQKASKSLGKAKTFTVDDTQSHQV
CCHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEECCCHHHHHCCCCEEEEECCCCCCEE
VVRLNEIVGSGSNQSLFESNPVIVTFQGNAEDLVISAPAIRNLDSGDKFNQMPNITVKTK
EEEEEHHHCCCCCCCEECCCCEEEEEECCCCEEEEECCHHCCCCCCCCHHCCCCEEEEEC
SGNAISAKVDVLKQEGLFPSGNVLNDLAEYNASGAVASVSKFTATTSANSMVAAPAGNAK
CCCEEEHHEEHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHEEECCCCCEEECCCCCCC
ANKGKVVVQGENVAEQQLQYWFQQADKETQTRFLNWAKSHK
CCCCEEEEECCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]