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The map label for this gene is ytfE [C]

Identifier: 148827101

GI number: 148827101

Start: 375301

End: 375972

Strand: Direct

Name: ytfE [C]

Synonym: CGSHiGG_02120

Alternate gene names: 148827101

Gene position: 375301-375972 (Clockwise)

Preceding gene: 148827081

Following gene: 148827102

Centisome position: 19.89

GC content: 35.42

Gene sequence:

>672_bases
ATGTCTTTTGCCCAACAAAAACTTAGCGAACTCGCTGTTTCAATTCCAGGTGCAACTAAAATTTTTCGTGAATATGATTT
AGATTTTTGCTGCGGAGGTTCTGTATTATTAGAAGTCGCAGCACAACAAAAGAATCTTAACCTTGCTGAAATTGAAAAAC
GTTTAACTGATTTACAACAAAGTAAAGCAGAAAATAATGATAAAGATTGGACTTCGGCATCTTATGCAGAGATGATCGAT
CACATTATTACTCGTTTTCATAATCGCCACCGTGAACAACTCCCTGAATTAATTACATTGGCGGAGAAAGTAGAAAATGT
ACATGGTGATCGTGATGACTGTCCTATAGGCGTAACCGCACAGTTAGAAAAAATTTATGCTGAACTTAGCCAGCATTTAA
TGAAAGAAGAACAAATTTTGTTCCCAATGATCAAAATGGGGAATTATGCTATGGCCTCAATGCCAATTCGTGTAATGGAA
ATGGAACACGATGAAGCAGGACAAGATGTGGAAGTGATCAAATCCCTTACTAATAACTGCACGCCACCAGCAGATGCTTG
TTTCAGTTGGAAAGCCTTATATAGCGGTATTAATGAATTTATTGATGATTTAATGCATCATATTCATTTGGAAAATAATA
TTTTATTTCCACGTGTATTAAACGAAAAATAA

Upstream 100 bases:

>100_bases
AATTTAATCAATAAATAAATTTCTCTACTTTTCATAATCAGAAAAATATCCTACTATTTTTATCGGATTTATTTTTACTT
AATCAATATAGGAGTGATTT

Downstream 100 bases:

>100_bases
TTTAATATTCGTCAAAAAATAACCGCACTTTAATCTATTCCGAAAAACAAACTAAAGTGCGGTCATTTTTACAAGCGTTT
TGAGTTGGTCGATAAGCCGA

Product: iron-sulfur cluster repair di-iron protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MSFAQQKLSELAVSIPGATKIFREYDLDFCCGGSVLLEVAAQQKNLNLAEIEKRLTDLQQSKAENNDKDWTSASYAEMID
HIITRFHNRHREQLPELITLAEKVENVHGDRDDCPIGVTAQLEKIYAELSQHLMKEEQILFPMIKMGNYAMASMPIRVME
MEHDEAGQDVEVIKSLTNNCTPPADACFSWKALYSGINEFIDDLMHHIHLENNILFPRVLNEK

Sequences:

>Translated_223_residues
MSFAQQKLSELAVSIPGATKIFREYDLDFCCGGSVLLEVAAQQKNLNLAEIEKRLTDLQQSKAENNDKDWTSASYAEMID
HIITRFHNRHREQLPELITLAEKVENVHGDRDDCPIGVTAQLEKIYAELSQHLMKEEQILFPMIKMGNYAMASMPIRVME
MEHDEAGQDVEVIKSLTNNCTPPADACFSWKALYSGINEFIDDLMHHIHLENNILFPRVLNEK
>Mature_222_residues
SFAQQKLSELAVSIPGATKIFREYDLDFCCGGSVLLEVAAQQKNLNLAEIEKRLTDLQQSKAENNDKDWTSASYAEMIDH
IITRFHNRHREQLPELITLAEKVENVHGDRDDCPIGVTAQLEKIYAELSQHLMKEEQILFPMIKMGNYAMASMPIRVMEM
EHDEAGQDVEVIKSLTNNCTPPADACFSWKALYSGINEFIDDLMHHIHLENNILFPRVLNEK

Specific function: Unknown

COG id: COG2846

COG function: function code D; Regulator of cell morphogenesis and NO signaling

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ytfE [H]

Homologues:

Organism=Escherichia coli, GI1790654, Length=220, Percent_Identity=58.6363636363636, Blast_Score=265, Evalue=2e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007500
- InterPro:   IPR019903
- InterPro:   IPR012312 [H]

Pfam domain/function: PF01814 Hemerythrin; PF04405 ScdA_N [H]

EC number: NA

Molecular weight: Translated: 25477; Mature: 25346

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFAQQKLSELAVSIPGATKIFREYDLDFCCGGSVLLEVAAQQKNLNLAEIEKRLTDLQQ
CCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
SKAENNDKDWTSASYAEMIDHIITRFHNRHREQLPELITLAEKVENVHGDRDDCPIGVTA
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
QLEKIYAELSQHLMKEEQILFPMIKMGNYAMASMPIRVMEMEHDEAGQDVEVIKSLTNNC
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHEECCCCCCCCHHHHHHHHHHCC
TPPADACFSWKALYSGINEFIDDLMHHIHLENNILFPRVLNEK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHCCCC
>Mature Secondary Structure 
SFAQQKLSELAVSIPGATKIFREYDLDFCCGGSVLLEVAAQQKNLNLAEIEKRLTDLQQ
CHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
SKAENNDKDWTSASYAEMIDHIITRFHNRHREQLPELITLAEKVENVHGDRDDCPIGVTA
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
QLEKIYAELSQHLMKEEQILFPMIKMGNYAMASMPIRVMEMEHDEAGQDVEVIKSLTNNC
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHEECCCCCCCCHHHHHHHHHHCC
TPPADACFSWKALYSGINEFIDDLMHHIHLENNILFPRVLNEK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]