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The map label for this gene is rimP [H]

Identifier: 148827022

GI number: 148827022

Start: 269092

End: 269547

Strand: Reverse

Name: rimP [H]

Synonym: CGSHiGG_01570

Alternate gene names: 148827022

Gene position: 269547-269092 (Counterclockwise)

Preceding gene: 148827024

Following gene: 148827021

Centisome position: 14.28

GC content: 39.04

Gene sequence:

>456_bases
TTGGCTACATTAGAACAAAATTTACAAGAAATGCTACAAGATGCGGTAGAGGATTTAGGCTGTGAATTGTGGGGAATTGA
GTGTCAGCGCGTGGGTCGTTTTATGACAGTTCGTTTATTTATAGATAAAGATGGTGGTGTGACAGTTGATGATTGTGCTG
ATGTAAGTCGTCAAGTGAGCGCAATTTTAGACGTGGAAGATCCAATTGCGGATAAATATAATCTAGAAGTGTCGTCACCC
GGTTTAGATCGTCCGCTATTTACCTTGCCGCAATTTGAACGCTATATTGGGCAAGATATCGCTGTGCATTTGCGAATTCC
AGTGATGGAACGCCGTAAATGGCAAGGTAAGTTAGAGCGTATTGAAAAGGATATGATTACTTTAATCGTTGATGATCAAG
AACAAATTTTAGTCTTCGGAAACATTCAAAAAGCGAATGTTGTTGCAAAATTTTAA

Upstream 100 bases:

>100_bases
TCTTACTATTACTAAAATAGAGGGATAAGTATTGTTTAGGATAAGGTTTCATAAGGTTATGATATAGTGCGGTGAATTAC
ACCCTATATAGGAGTAGAAA

Downstream 100 bases:

>100_bases
AAGGAGAAAAAGAGAAATGAGTAAAGAAATTTTACTGGCGGCGGAAGCTGTATCCAATGAAAAATTATTACCACGTGAGA
AAATTTTTGAAGCATTAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MATLEQNLQEMLQDAVEDLGCELWGIECQRVGRFMTVRLFIDKDGGVTVDDCADVSRQVSAILDVEDPIADKYNLEVSSP
GLDRPLFTLPQFERYIGQDIAVHLRIPVMERRKWQGKLERIEKDMITLIVDDQEQILVFGNIQKANVVAKF

Sequences:

>Translated_151_residues
MATLEQNLQEMLQDAVEDLGCELWGIECQRVGRFMTVRLFIDKDGGVTVDDCADVSRQVSAILDVEDPIADKYNLEVSSP
GLDRPLFTLPQFERYIGQDIAVHLRIPVMERRKWQGKLERIEKDMITLIVDDQEQILVFGNIQKANVVAKF
>Mature_150_residues
ATLEQNLQEMLQDAVEDLGCELWGIECQRVGRFMTVRLFIDKDGGVTVDDCADVSRQVSAILDVEDPIADKYNLEVSSPG
LDRPLFTLPQFERYIGQDIAVHLRIPVMERRKWQGKLERIEKDMITLIVDDQEQILVFGNIQKANVVAKF

Specific function: Required for maturation of 30S ribosomal subunits [H]

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family [H]

Homologues:

Organism=Escherichia coli, GI226510978, Length=151, Percent_Identity=54.9668874172185, Blast_Score=174, Evalue=2e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003728 [H]

Pfam domain/function: PF02576 DUF150 [H]

EC number: NA

Molecular weight: Translated: 17267; Mature: 17136

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATLEQNLQEMLQDAVEDLGCELWGIECQRVGRFMTVRLFIDKDGGVTVDDCADVSRQVS
CCCHHHHHHHHHHHHHHHCCCEEECCCHHHCCCEEEEEEEEECCCCEEHHHHHHHHHHHH
AILDVEDPIADKYNLEVSSPGLDRPLFTLPQFERYIGQDIAVHLRIPVMERRKWQGKLER
HHHCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH
IEKDMITLIVDDQEQILVFGNIQKANVVAKF
HHHHEEEEEECCCCEEEEEECCEECCEEECC
>Mature Secondary Structure 
ATLEQNLQEMLQDAVEDLGCELWGIECQRVGRFMTVRLFIDKDGGVTVDDCADVSRQVS
CCHHHHHHHHHHHHHHHCCCEEECCCHHHCCCEEEEEEEEECCCCEEHHHHHHHHHHHH
AILDVEDPIADKYNLEVSSPGLDRPLFTLPQFERYIGQDIAVHLRIPVMERRKWQGKLER
HHHCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH
IEKDMITLIVDDQEQILVFGNIQKANVVAKF
HHHHEEEEEECCCCEEEEEECCEECCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA