Click here to switch to the map view.

The map label for this gene is glgA [H]

Identifier: 148826831

GI number: 148826831

Start: 82074

End: 83504

Strand: Direct

Name: glgA [H]

Synonym: CGSHiGG_00455

Alternate gene names: 148826831

Gene position: 82074-83504 (Clockwise)

Preceding gene: 148826830

Following gene: 148826832

Centisome position: 4.35

GC content: 46.12

Gene sequence:

>1431_bases
ATGAAAATACTACACGTTTGTTCGGAACTCTATCCGCTCTTAAAAACAGGTGGGCTTGCCGATGTTTTAGGGGCATTACC
CCAAGCACAGAACCAAATTGGGCTAGATGCTCGCGTTTTATTGCCTGCTTATCCCGCAATTATAGCAGGCATTCCGAATA
CTCAAGTGGTTGCCGAATTTGACAACTTCGCTGGGCACGTGGTGTTACGTTATGGAGAATATAACGGTGTCGGGATCTAT
TTGATTGACGCACCGCACTTATACGGTCGCGAAGGCAATCCTTATCACGATGCCTATTACAATGACTACGGCGACAACTA
CAAACGTTTTGCCTTGCTCGGTTGGGTGGGGGCAGAATTAGCCACAGGTTTAGATAGCTGGTGGCGTGCAGAAGTGGTGC
ACGCCCACGATTGGCACGCAGGTTTGTGTGCAGCATATCTGTTCAACAAAGGTCGCCCTGCAAAATCGGTGTTCACTATT
CATAACTTGGCGTATCAAGGGCAGTTTTCTTATCATCATTTGTATGAAATCGGCTTGCCAACAGGAATGTTCCACGTAGA
AGGCTTGGAATTATTTGGGCAGATTTCTTACTTGAAATCAGGCTTGTTCTATTCCGATGCAAGCACGGCAGTTAGCCCAA
CTTATGCCCAAGAAATCACGACACCAGAATTTGCCTACGGTTTGCAAGGCTTGCTTTCTGGCTTAAAAGCTCAAGATCGT
TTGGTGGGGATTTTAAACGGCGTGGACGAAAATATTTGGCATCCGAACGTGGATCAATACATTCCGCACCATTACAAGCT
GAAATATATGGCAGGTAAAAAGAAAAACAAAGCTGAACTGCAAGCCTATTTCAATTTGCCACAAGATGAATCTGCTTTGG
CATTTGTGATGGTTACCCGTTTAACCGAGCAAAAAGGTGTAGATTTATTAATCGAAAGTGCAGACGAAATCGTCAAACAG
GGCGGGCAGTTGATGATTTTAGGTTCAGGTGCACCGCACTTGGAACAAGGTATTCGTGAGCTTGCTGAACGTTACCCACA
AAATATTGCGGTAAAAATCGGCTATGATGAAGCCCTTTCGCATTTAATGGTGGCAGGTGGCGATGTGATTTTAGTGCCAA
GCCGTTTCGAGCCTTGTGGCTTAACCCAACTTTATGGTTTGCAATATGGCACACTGCCACTAGTTCGTAAAACGGGTGGT
TTGGCGGATACGGTGGTGGATAGCACCTCAGAAAGTATCAAAGCTTGCACCGCAACAGGTTTTGTGTTTGAAAGTGCAAC
GCCTGAAGCTCTCCGCCATTGCTTGCAACGTGCCTTTGCCTTATGGCAAAAACCGCGTGCATGGGCGATAGTTCGCACCG
ATGCGATGGCACAAGATTTTAGCTGGCGTAAAGCAGCAGAACAATATCGTGCACTTTATGAACGCTTATAG

Upstream 100 bases:

>100_bases
AAGTGCGGTCAATTTTGACCGCACTTTCTGAACCCCCTCTTTAGCAAAGAGGGCGGCTGATCGAGCATTATTCATATTTA
TAGGGAAAATAAAAAACTCA

Downstream 100 bases:

>100_bases
TTTTATTCGTAAACTTTCTTAACAATCACACCGCTTGTGAAAGAATATTTTGAAAGCGGTGTGGTTGTGCTTGTTTTTTA
CAAAGATAAGCATAAAATTC

Product: glycogen synthase

Products: NA

Alternate protein names: Starch [bacterial glycogen] synthase [H]

Number of amino acids: Translated: 476; Mature: 476

Protein sequence:

>476_residues
MKILHVCSELYPLLKTGGLADVLGALPQAQNQIGLDARVLLPAYPAIIAGIPNTQVVAEFDNFAGHVVLRYGEYNGVGIY
LIDAPHLYGREGNPYHDAYYNDYGDNYKRFALLGWVGAELATGLDSWWRAEVVHAHDWHAGLCAAYLFNKGRPAKSVFTI
HNLAYQGQFSYHHLYEIGLPTGMFHVEGLELFGQISYLKSGLFYSDASTAVSPTYAQEITTPEFAYGLQGLLSGLKAQDR
LVGILNGVDENIWHPNVDQYIPHHYKLKYMAGKKKNKAELQAYFNLPQDESALAFVMVTRLTEQKGVDLLIESADEIVKQ
GGQLMILGSGAPHLEQGIRELAERYPQNIAVKIGYDEALSHLMVAGGDVILVPSRFEPCGLTQLYGLQYGTLPLVRKTGG
LADTVVDSTSESIKACTATGFVFESATPEALRHCLQRAFALWQKPRAWAIVRTDAMAQDFSWRKAAEQYRALYERL

Sequences:

>Translated_476_residues
MKILHVCSELYPLLKTGGLADVLGALPQAQNQIGLDARVLLPAYPAIIAGIPNTQVVAEFDNFAGHVVLRYGEYNGVGIY
LIDAPHLYGREGNPYHDAYYNDYGDNYKRFALLGWVGAELATGLDSWWRAEVVHAHDWHAGLCAAYLFNKGRPAKSVFTI
HNLAYQGQFSYHHLYEIGLPTGMFHVEGLELFGQISYLKSGLFYSDASTAVSPTYAQEITTPEFAYGLQGLLSGLKAQDR
LVGILNGVDENIWHPNVDQYIPHHYKLKYMAGKKKNKAELQAYFNLPQDESALAFVMVTRLTEQKGVDLLIESADEIVKQ
GGQLMILGSGAPHLEQGIRELAERYPQNIAVKIGYDEALSHLMVAGGDVILVPSRFEPCGLTQLYGLQYGTLPLVRKTGG
LADTVVDSTSESIKACTATGFVFESATPEALRHCLQRAFALWQKPRAWAIVRTDAMAQDFSWRKAAEQYRALYERL
>Mature_476_residues
MKILHVCSELYPLLKTGGLADVLGALPQAQNQIGLDARVLLPAYPAIIAGIPNTQVVAEFDNFAGHVVLRYGEYNGVGIY
LIDAPHLYGREGNPYHDAYYNDYGDNYKRFALLGWVGAELATGLDSWWRAEVVHAHDWHAGLCAAYLFNKGRPAKSVFTI
HNLAYQGQFSYHHLYEIGLPTGMFHVEGLELFGQISYLKSGLFYSDASTAVSPTYAQEITTPEFAYGLQGLLSGLKAQDR
LVGILNGVDENIWHPNVDQYIPHHYKLKYMAGKKKNKAELQAYFNLPQDESALAFVMVTRLTEQKGVDLLIESADEIVKQ
GGQLMILGSGAPHLEQGIRELAERYPQNIAVKIGYDEALSHLMVAGGDVILVPSRFEPCGLTQLYGLQYGTLPLVRKTGG
LADTVVDSTSESIKACTATGFVFESATPEALRHCLQRAFALWQKPRAWAIVRTDAMAQDFSWRKAAEQYRALYERL

Specific function: Synthesizes alpha-1,4-glucan chains using ADP-glucose [H]

COG id: COG0297

COG function: function code G; Glycogen synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789836, Length=476, Percent_Identity=58.6134453781513, Blast_Score=580, Evalue=1e-166,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011835
- InterPro:   IPR001296
- InterPro:   IPR013534 [H]

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]

EC number: =2.4.1.21 [H]

Molecular weight: Translated: 52809; Mature: 52809

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILHVCSELYPLLKTGGLADVLGALPQAQNQIGLDARVLLPAYPAIIAGIPNTQVVAEF
CHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHCCCCEEEECCCCHHHHCCCCCCEEEEEC
DNFAGHVVLRYGEYNGVGIYLIDAPHLYGREGNPYHDAYYNDYGDNYKRFALLGWVGAEL
CCCCCEEEEEECCCCCEEEEEEECCHHCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHH
ATGLDSWWRAEVVHAHDWHAGLCAAYLFNKGRPAKSVFTIHNLAYQGQFSYHHLYEIGLP
HHCHHHHHHEEEEECCCCHHHHHHHHHHCCCCCCHHEEEEEHHEECCCCCCEEEEEECCC
TGMFHVEGLELFGQISYLKSGLFYSDASTAVSPTYAQEITTPEFAYGLQGLLSGLKAQDR
CCEEEEHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCHHHH
LVGILNGVDENIWHPNVDQYIPHHYKLKYMAGKKKNKAELQAYFNLPQDESALAFVMVTR
HHHHHHCCCCCCCCCCHHHHCCCCEEEEEECCCCCCHHHHHHEECCCCCCCHHHHHHHHH
LTEQKGVDLLIESADEIVKQGGQLMILGSGAPHLEQGIRELAERYPQNIAVKIGYDEALS
HHHHCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEECHHHHHH
HLMVAGGDVILVPSRFEPCGLTQLYGLQYGTLPLVRKTGGLADTVVDSTSESIKACTATG
HHHHCCCCEEEECCCCCCCCCHHHHCCCCCCCHHHHHCCCCHHHHHCCCHHHHHHHHHHC
FVFESATPEALRHCLQRAFALWQKPRAWAIVRTDAMAQDFSWRKAAEQYRALYERL
EEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKILHVCSELYPLLKTGGLADVLGALPQAQNQIGLDARVLLPAYPAIIAGIPNTQVVAEF
CHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHCCCCEEEECCCCHHHHCCCCCCEEEEEC
DNFAGHVVLRYGEYNGVGIYLIDAPHLYGREGNPYHDAYYNDYGDNYKRFALLGWVGAEL
CCCCCEEEEEECCCCCEEEEEEECCHHCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHH
ATGLDSWWRAEVVHAHDWHAGLCAAYLFNKGRPAKSVFTIHNLAYQGQFSYHHLYEIGLP
HHCHHHHHHEEEEECCCCHHHHHHHHHHCCCCCCHHEEEEEHHEECCCCCCEEEEEECCC
TGMFHVEGLELFGQISYLKSGLFYSDASTAVSPTYAQEITTPEFAYGLQGLLSGLKAQDR
CCEEEEHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCHHHH
LVGILNGVDENIWHPNVDQYIPHHYKLKYMAGKKKNKAELQAYFNLPQDESALAFVMVTR
HHHHHHCCCCCCCCCCHHHHCCCCEEEEEECCCCCCHHHHHHEECCCCCCCHHHHHHHHH
LTEQKGVDLLIESADEIVKQGGQLMILGSGAPHLEQGIRELAERYPQNIAVKIGYDEALS
HHHHCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEECHHHHHH
HLMVAGGDVILVPSRFEPCGLTQLYGLQYGTLPLVRKTGGLADTVVDSTSESIKACTATG
HHHHCCCCEEEECCCCCCCCCHHHHCCCCCCCHHHHHCCCCHHHHHCCCHHHHHHHHHHC
FVFESATPEALRHCLQRAFALWQKPRAWAIVRTDAMAQDFSWRKAAEQYRALYERL
EEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA