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The map label for this gene is umuD [C]

Identifier: 148826798

GI number: 148826798

Start: 35404

End: 35844

Strand: Reverse

Name: umuD [C]

Synonym: CGSHiGG_00225

Alternate gene names: 148826798

Gene position: 35844-35404 (Counterclockwise)

Preceding gene: 148826802

Following gene: 148826776

Centisome position: 1.9

GC content: 33.11

Gene sequence:

>441_bases
ATGAACAACCAAACTTTGGCTACACAATATGAAATGGATTTTTCTTATAATCCACTGCCTTTTTTCAGTGATATAGAAGA
TAACCTTAAATTCAACAAAAAATTAGATTTAAATCTTTACTGTATCAAACGTCCAAAACAAACTTGTTTTATTCATATAA
CTAACCCAAATATGTTGGCTTGGGGAATTGAAAGCGGCGATATGTTAGTCGTCGAAAAAAATGACGATCTTTATTCTGGT
GATCTTGTTGTGCTAGAAGAAAATAACGAATTTCATGTCTATGAATTTATGGCGCATAACGGCAATTATCTTTTCATGGC
ATTGGATTCCACAACACCAAATATAAATACAAAAGATTGGTCGAATTTACCTATTATCGGCACCGTAACCAATACGATTC
ATCAAATGAAACGTCGCAATAAAATGAAATGGGCAGCGTAG

Upstream 100 bases:

>100_bases
AACCTATTGACACCCTGTATGAAATATCAGTAAAATTTAACTGTACAAAAAAACAAGGTAAAAGGTTATTTATCCATATT
ATTTAACAGGAGACAAGAGA

Downstream 100 bases:

>100_bases
TTAAAAGCAAATAAAAAAGTGCGGTGAAAATCAACCGCACTTCTATCTAGTATCTAGGTTATATTTCAATTAATTACTCG
TCGCTTTACGTCTAGCAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MNNQTLATQYEMDFSYNPLPFFSDIEDNLKFNKKLDLNLYCIKRPKQTCFIHITNPNMLAWGIESGDMLVVEKNDDLYSG
DLVVLEENNEFHVYEFMAHNGNYLFMALDSTTPNINTKDWSNLPIIGTVTNTIHQMKRRNKMKWAA

Sequences:

>Translated_146_residues
MNNQTLATQYEMDFSYNPLPFFSDIEDNLKFNKKLDLNLYCIKRPKQTCFIHITNPNMLAWGIESGDMLVVEKNDDLYSG
DLVVLEENNEFHVYEFMAHNGNYLFMALDSTTPNINTKDWSNLPIIGTVTNTIHQMKRRNKMKWAA
>Mature_146_residues
MNNQTLATQYEMDFSYNPLPFFSDIEDNLKFNKKLDLNLYCIKRPKQTCFIHITNPNMLAWGIESGDMLVVEKNDDLYSG
DLVVLEENNEFHVYEFMAHNGNYLFMALDSTTPNINTKDWSNLPIIGTVTNTIHQMKRRNKMKWAA

Specific function: Involved In Uv Protection And Mutation. Essential For Induced (Or Sos) Mutagenesis. May Modify The DNA Replication Machinery To Allow Bypass Synthesis Across A Damaged Template. [C]

COG id: COG1974

COG function: function code KT; SOS-response transcriptional repressors (RecA-mediated autopeptidases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S24 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019759
- InterPro:   IPR015927
- InterPro:   IPR011056 [H]

Pfam domain/function: PF00717 Peptidase_S24 [H]

EC number: 3.4.21.- [C]

Molecular weight: Translated: 17064; Mature: 17064

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNQTLATQYEMDFSYNPLPFFSDIEDNLKFNKKLDLNLYCIKRPKQTCFIHITNPNMLA
CCCCEEEEEEEECCCCCCCCCCCCCCCCCEECEEECEEEEEEECCCCEEEEEECCCCEEE
WGIESGDMLVVEKNDDLYSGDLVVLEENNEFHVYEFMAHNGNYLFMALDSTTPNINTKDW
EEECCCCEEEEECCCCEECCCEEEEECCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCC
SNLPIIGTVTNTIHQMKRRNKMKWAA
CCCCEEEEHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNNQTLATQYEMDFSYNPLPFFSDIEDNLKFNKKLDLNLYCIKRPKQTCFIHITNPNMLA
CCCCEEEEEEEECCCCCCCCCCCCCCCCCEECEEECEEEEEEECCCCEEEEEECCCCEEE
WGIESGDMLVVEKNDDLYSGDLVVLEENNEFHVYEFMAHNGNYLFMALDSTTPNINTKDW
EEECCCCEEEEECCCCEECCCEEEEECCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCC
SNLPIIGTVTNTIHQMKRRNKMKWAA
CCCCEEEEHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]