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The map label for this gene is prfA [C]

Identifier: 148826786

GI number: 148826786

Start: 23624

End: 24427

Strand: Direct

Name: prfA [C]

Synonym: CGSHiGG_00165

Alternate gene names: 148826786

Gene position: 23624-24427 (Clockwise)

Preceding gene: 148826785

Following gene: 148826787

Centisome position: 1.25

GC content: 38.93

Gene sequence:

>804_bases
ATGAAATATTATCGACGTGCGTTATACGATAAATTTGTGCATTTTTATCTTGTGATCTCTGATGATGGCAGCTCAGAAGC
ACAACTTCGGGGAAAAATGGGTGGGCTTGTGCGTAAAGCGCGTAAAAAAATTTCGCCAGATTGGCCGAAAGAAAAGCAGA
TTCATCAGTTACTACAGCTATTTTATGGTGATTGGGGCTTTCATTGCGATCCAGAAGATTATTTTTATGCTCGCAATTTA
TATTTGCCTTATGTGTTTGAACATCGTCAAGGAATGCCAGTGACTCTTGGGGCTATGGTGTTTTATTTAGCTGAGGCATT
GGATTTGCCAATTTACCCAGTAAATTTCCCAACACAGTTAATTTTACGTGCTGAAGTTGGAGATGAAGTGGCTTTTATTG
ATCCTTGGGATGGCACTTATATTTCACAAGAAAAATTGCAGCAACTTTATGAAGGTGCATTTGGGTTTGGAGCGAAAATT
CAACCCGAAGAACTTGATAGAGCCGATCTTTCTTTACTTTATTCTCGCTTTGAGCAACTGGCGAAAAATGCGCTTATTCG
TGAAGAGCATAACGATATGGCATATCACTATATTAAGAATTTAATGATTACTGATGCTGAAAATCCTTATCATATCCGTG
ACCGTGGCTTAGTTTTGGCTCAAATGGGGGCTTATCCTTCAGCATTGAAAGATTTAGAATTTTTTGTGGAACATTGTCCA
AAAGATCCAACGGCGGCGTTTATCCGCACGCAACTTTTAGAACTTAAAGGCGAGATTAATAAAGATACTTTTCCCCTCCA
TTGA

Upstream 100 bases:

>100_bases
AAGTGCGGTCAATTTTCCTAGAAAATTATTGGGAAATGGTTGAAACCGTGCGTGATTATGGCGACAATGAGCGCGTCACT
TTAGGTTTTTGGAAGAAGTA

Downstream 100 bases:

>100_bases
TTTAAGGAAAATTTATGCAAAATAAAATTGTAAAAATTGGCAATATTGATGTTGCAAACGACAAACCTTTCGTGCTTTTT
GGCGGAATGAACGTGCTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MKYYRRALYDKFVHFYLVISDDGSSEAQLRGKMGGLVRKARKKISPDWPKEKQIHQLLQLFYGDWGFHCDPEDYFYARNL
YLPYVFEHRQGMPVTLGAMVFYLAEALDLPIYPVNFPTQLILRAEVGDEVAFIDPWDGTYISQEKLQQLYEGAFGFGAKI
QPEELDRADLSLLYSRFEQLAKNALIREEHNDMAYHYIKNLMITDAENPYHIRDRGLVLAQMGAYPSALKDLEFFVEHCP
KDPTAAFIRTQLLELKGEINKDTFPLH

Sequences:

>Translated_267_residues
MKYYRRALYDKFVHFYLVISDDGSSEAQLRGKMGGLVRKARKKISPDWPKEKQIHQLLQLFYGDWGFHCDPEDYFYARNL
YLPYVFEHRQGMPVTLGAMVFYLAEALDLPIYPVNFPTQLILRAEVGDEVAFIDPWDGTYISQEKLQQLYEGAFGFGAKI
QPEELDRADLSLLYSRFEQLAKNALIREEHNDMAYHYIKNLMITDAENPYHIRDRGLVLAQMGAYPSALKDLEFFVEHCP
KDPTAAFIRTQLLELKGEINKDTFPLH
>Mature_267_residues
MKYYRRALYDKFVHFYLVISDDGSSEAQLRGKMGGLVRKARKKISPDWPKEKQIHQLLQLFYGDWGFHCDPEDYFYARNL
YLPYVFEHRQGMPVTLGAMVFYLAEALDLPIYPVNFPTQLILRAEVGDEVAFIDPWDGTYISQEKLQQLYEGAFGFGAKI
QPEELDRADLSLLYSRFEQLAKNALIREEHNDMAYHYIKNLMITDAENPYHIRDRGLVLAQMGAYPSALKDLEFFVEHCP
KDPTAAFIRTQLLELKGEINKDTFPLH

Specific function: Unknown

COG id: COG2912

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0162 family [H]

Homologues:

Organism=Escherichia coli, GI1787465, Length=218, Percent_Identity=40.3669724770642, Blast_Score=163, Evalue=1e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31132; Mature: 31132

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYYRRALYDKFVHFYLVISDDGSSEAQLRGKMGGLVRKARKKISPDWPKEKQIHQLLQL
CCHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
FYGDWGFHCDPEDYFYARNLYLPYVFEHRQGMPVTLGAMVFYLAEALDLPIYPVNFPTQL
HHCCCCCCCCCCHHEEEECCCCCHHEECCCCCCCHHHHHHHHHHHHHCCCEEECCCCHHE
ILRAEVGDEVAFIDPWDGTYISQEKLQQLYEGAFGFGAKIQPEELDRADLSLLYSRFEQL
EEEECCCCCEEEECCCCCCEECHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
AKNALIREEHNDMAYHYIKNLMITDAENPYHIRDRGLVLAQMGAYPSALKDLEFFVEHCP
HHHHHHHHHCCHHHHHHHHHHHEECCCCCEEECCCCEEEEECCCCHHHHHHHHHHHHHCC
KDPTAAFIRTQLLELKGEINKDTFPLH
CCHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKYYRRALYDKFVHFYLVISDDGSSEAQLRGKMGGLVRKARKKISPDWPKEKQIHQLLQL
CCHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
FYGDWGFHCDPEDYFYARNLYLPYVFEHRQGMPVTLGAMVFYLAEALDLPIYPVNFPTQL
HHCCCCCCCCCCHHEEEECCCCCHHEECCCCCCCHHHHHHHHHHHHHCCCEEECCCCHHE
ILRAEVGDEVAFIDPWDGTYISQEKLQQLYEGAFGFGAKIQPEELDRADLSLLYSRFEQL
EEEECCCCCEEEECCCCCCEECHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
AKNALIREEHNDMAYHYIKNLMITDAENPYHIRDRGLVLAQMGAYPSALKDLEFFVEHCP
HHHHHHHHHCCHHHHHHHHHHHEECCCCCEEECCCCEEEEECCCCHHHHHHHHHHHHHCC
KDPTAAFIRTQLLELKGEINKDTFPLH
CCHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]