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The map label for this gene is ybeQ [H]

Identifier: 148826781

GI number: 148826781

Start: 19275

End: 20039

Strand: Direct

Name: ybeQ [H]

Synonym: CGSHiGG_00140

Alternate gene names: 148826781

Gene position: 19275-20039 (Clockwise)

Preceding gene: 148826780

Following gene: 148826782

Centisome position: 1.02

GC content: 35.69

Gene sequence:

>765_bases
ATGAAACTGACAAAAACACTTTTAACCACCGCACTTTTAGGTGCTTCTATCTTTTCTTTTCAATCAACCGTTTATGCAAT
GGAAGAGGAGCAAGTTGATAAGATTGTTAATTTATTTGAACAGAAAGATTTTAAGTCCGCATTAGCAATTATTCGTCCTT
TAGCAGAGCAGGGAGATGGGATTGCACAGGGGATGTTAGCGGTGTTATATAAAAATGGCGATGGCATAAAGCAAGATTAT
TTTGAAGCGATAAAATGGTATAAAAAATCGGCTGAACAAGGTGTACGTATCGCTCAATATGATTTAGCTGGTATGTATAT
TAACGGCTTGGGCGTAAAACAAAATTACCAAGAAGGCTTTAAATGGTTGAAGGAAGCTGCGGAGCAAGATGATGTTGATG
CCCAATTTAAAGTGGGAATGATGTATAAAGATGGGGTTGGCGTAAAACAGAATAATACGGAAGCAGTAAAATGGTTGAAA
AAAGCGGCAAATCAAAATGATACTGAATCCCAAATGATATTGGGCGATATGTATTATGATGGCGATGGAGTAAAAGAAAA
TAAAACTGAAGCCATAAAATGGTATCAAAAAGCAGCAGAAAATAATAATTCTCGAGCGCAGGCAATAGTTGGTCTTGCTT
ATATGGGCGGAATAGGAGTAAAACAAAATTTTGCCACTGCAAAAAAATGGTTTGGTAAGGCTTGTGATAATAAAGAGCAA
AAAGGTTGTGAAATGTATAAACAATTAAATCAAGGAACAAAATAA

Upstream 100 bases:

>100_bases
GATTAATTATTCAGATTTAGAAAGTTATCACTTAATTAATCAATATAATTCTCGAGAGAAAAGAATAAGTAATGTATTTA
AATCTTAATAAGGAAACAAA

Downstream 100 bases:

>100_bases
TGAAGAAAAAATTAACCTTAGCCGTTTTATTATTGGCAGTAATTGGTGGAGAATCTGTGTATTTTACCCAATATTACCCT
GAACAGGCAGAAATTCGAAA

Product: Sel1 repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MKLTKTLLTTALLGASIFSFQSTVYAMEEEQVDKIVNLFEQKDFKSALAIIRPLAEQGDGIAQGMLAVLYKNGDGIKQDY
FEAIKWYKKSAEQGVRIAQYDLAGMYINGLGVKQNYQEGFKWLKEAAEQDDVDAQFKVGMMYKDGVGVKQNNTEAVKWLK
KAANQNDTESQMILGDMYYDGDGVKENKTEAIKWYQKAAENNNSRAQAIVGLAYMGGIGVKQNFATAKKWFGKACDNKEQ
KGCEMYKQLNQGTK

Sequences:

>Translated_254_residues
MKLTKTLLTTALLGASIFSFQSTVYAMEEEQVDKIVNLFEQKDFKSALAIIRPLAEQGDGIAQGMLAVLYKNGDGIKQDY
FEAIKWYKKSAEQGVRIAQYDLAGMYINGLGVKQNYQEGFKWLKEAAEQDDVDAQFKVGMMYKDGVGVKQNNTEAVKWLK
KAANQNDTESQMILGDMYYDGDGVKENKTEAIKWYQKAAENNNSRAQAIVGLAYMGGIGVKQNFATAKKWFGKACDNKEQ
KGCEMYKQLNQGTK
>Mature_254_residues
MKLTKTLLTTALLGASIFSFQSTVYAMEEEQVDKIVNLFEQKDFKSALAIIRPLAEQGDGIAQGMLAVLYKNGDGIKQDY
FEAIKWYKKSAEQGVRIAQYDLAGMYINGLGVKQNYQEGFKWLKEAAEQDDVDAQFKVGMMYKDGVGVKQNNTEAVKWLK
KAANQNDTESQMILGDMYYDGDGVKENKTEAIKWYQKAAENNNSRAQAIVGLAYMGGIGVKQNFATAKKWFGKACDNKEQ
KGCEMYKQLNQGTK

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI151301150, Length=185, Percent_Identity=31.8918918918919, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI19923669, Length=185, Percent_Identity=32.4324324324324, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI217330658, Length=167, Percent_Identity=30.5389221556886, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI217330656, Length=167, Percent_Identity=30.5389221556886, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI33620759, Length=215, Percent_Identity=29.7674418604651, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI87081769, Length=196, Percent_Identity=36.2244897959184, Blast_Score=111, Evalue=5e-26,
Organism=Escherichia coli, GI1786867, Length=124, Percent_Identity=38.7096774193548, Blast_Score=88, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI17563256, Length=184, Percent_Identity=30.9782608695652, Blast_Score=84, Evalue=9e-17,
Organism=Drosophila melanogaster, GI21355295, Length=180, Percent_Identity=28.8888888888889, Blast_Score=82, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 28468; Mature: 28468

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTKTLLTTALLGASIFSFQSTVYAMEEEQVDKIVNLFEQKDFKSALAIIRPLAEQGDG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
IAQGMLAVLYKNGDGIKQDYFEAIKWYKKSAEQGVRIAQYDLAGMYINGLGVKQNYQEGF
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEHHHHEEEECCCCCCCHHHHH
KWLKEAAEQDDVDAQFKVGMMYKDGVGVKQNNTEAVKWLKKAANQNDTESQMILGDMYYD
HHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCHHEEEEHEEEC
GDGVKENKTEAIKWYQKAAENNNSRAQAIVGLAYMGGIGVKQNFATAKKWFGKACDNKEQ
CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHH
KGCEMYKQLNQGTK
HHHHHHHHHHCCCC
>Mature Secondary Structure
MKLTKTLLTTALLGASIFSFQSTVYAMEEEQVDKIVNLFEQKDFKSALAIIRPLAEQGDG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
IAQGMLAVLYKNGDGIKQDYFEAIKWYKKSAEQGVRIAQYDLAGMYINGLGVKQNYQEGF
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEHHHHEEEECCCCCCCHHHHH
KWLKEAAEQDDVDAQFKVGMMYKDGVGVKQNNTEAVKWLKKAANQNDTESQMILGDMYYD
HHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCHHEEEEHEEEC
GDGVKENKTEAIKWYQKAAENNNSRAQAIVGLAYMGGIGVKQNFATAKKWFGKACDNKEQ
CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHH
KGCEMYKQLNQGTK
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]