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The map label for this gene is yibD [C]

Identifier: 148826760

GI number: 148826760

Start: 1569

End: 2264

Strand: Reverse

Name: yibD [C]

Synonym: CGSHiGG_00020

Alternate gene names: 148826760

Gene position: 2264-1569 (Counterclockwise)

Preceding gene: 148826761

Following gene: NA

Centisome position: 0.12

GC content: 29.02

Gene sequence:

>696_bases
ATGGAAAATTTCCCATTAGTATCGGTTATTTTTTGTGCTTATAACGCTGAGCAATATATAGATGAAAGCATTTCATCCAT
TATTAATCAGACTTATAAAAATCTAGAAATTATAGTTATCAATGATGGTTCAACAGATTTGACTTTGTCTCATTTAGAAG
AAATATCTAAATTAGATAAAAGGATAAAAATTATCAGTAATAAATATAATTTAGGGTTCATAAATTCTTTGAATATAGGC
CTTGGTTGTTTTTCAGGTAAATATTTTGCAAGAATGGATGCTGATGATATAGCTAAACCATCGTGGATTGAGAAAATAGT
TACCTATCTGGAGAAAAATGATCATATTACAGCAATGGGATCATACTTAGAGATTATTGTAGAAAAAGAATGTGGCATTA
TCGGTTCTAAATATAAAACTGGTGATATATGGAAAAATCCATTGCTACATAATGATATTTGTGAAGCTATGCTTTTCTAT
AATCCGATACATAACAACACTATGATTATGAGAGCAAATGTATATAGAGAGCATAAATTAATCTTTAATAAAGATTATCC
GTATGCAGAAGATTATAAGTTTTGGTCAGAGGTTAGTAGGCTTGGTTGTTTAGCTAATTATCCTGAAGCATTGGTAAAAT
ATAGACTACATGGAAACCAAACATCATCAGTTTATAATCATAAGCAAATGAGGTAG

Upstream 100 bases:

>100_bases
ATTAATTTAGGAGAGTTTTAATTGGTTATCTATGCATCTCCTTTTGTTATTTAAATAACGTATAAAATAGTTTAAAGAAG
AGTGTAAAATTAGAGCTTAT

Downstream 100 bases:

>100_bases
CTAAAAAGATAAAGAGGAAAATATTACATATTACCTTAATAAGATAGGTATAGATATAAAAGTAATTAATAGTGTGTCGT
TGCTAGAAATATATCATGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MENFPLVSVIFCAYNAEQYIDESISSIINQTYKNLEIIVINDGSTDLTLSHLEEISKLDKRIKIISNKYNLGFINSLNIG
LGCFSGKYFARMDADDIAKPSWIEKIVTYLEKNDHITAMGSYLEIIVEKECGIIGSKYKTGDIWKNPLLHNDICEAMLFY
NPIHNNTMIMRANVYREHKLIFNKDYPYAEDYKFWSEVSRLGCLANYPEALVKYRLHGNQTSSVYNHKQMR

Sequences:

>Translated_231_residues
MENFPLVSVIFCAYNAEQYIDESISSIINQTYKNLEIIVINDGSTDLTLSHLEEISKLDKRIKIISNKYNLGFINSLNIG
LGCFSGKYFARMDADDIAKPSWIEKIVTYLEKNDHITAMGSYLEIIVEKECGIIGSKYKTGDIWKNPLLHNDICEAMLFY
NPIHNNTMIMRANVYREHKLIFNKDYPYAEDYKFWSEVSRLGCLANYPEALVKYRLHGNQTSSVYNHKQMR
>Mature_231_residues
MENFPLVSVIFCAYNAEQYIDESISSIINQTYKNLEIIVINDGSTDLTLSHLEEISKLDKRIKIISNKYNLGFINSLNIG
LGCFSGKYFARMDADDIAKPSWIEKIVTYLEKNDHITAMGSYLEIIVEKECGIIGSKYKTGDIWKNPLLHNDICEAMLFY
NPIHNNTMIMRANVYREHKLIFNKDYPYAEDYKFWSEVSRLGCLANYPEALVKYRLHGNQTSSVYNHKQMR

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 26780; Mature: 26780

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENFPLVSVIFCAYNAEQYIDESISSIINQTYKNLEIIVINDGSTDLTLSHLEEISKLDK
CCCCCCEEHHHHHCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEHHHHHHHHHHHH
RIKIISNKYNLGFINSLNIGLGCFSGKYFARMDADDIAKPSWIEKIVTYLEKNDHITAMG
HHHHHCCCCCEEEEEECCCCEEEECCCEEEECCHHHCCCCHHHHHHHHHHHCCCCEEEHH
SYLEIIVEKECGIIGSKYKTGDIWKNPLLHNDICEAMLFYNPIHNNTMIMRANVYREHKL
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCEEE
IFNKDYPYAEDYKFWSEVSRLGCLANYPEALVKYRLHGNQTSSVYNHKQMR
EEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHCCCC
>Mature Secondary Structure
MENFPLVSVIFCAYNAEQYIDESISSIINQTYKNLEIIVINDGSTDLTLSHLEEISKLDK
CCCCCCEEHHHHHCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEHHHHHHHHHHHH
RIKIISNKYNLGFINSLNIGLGCFSGKYFARMDADDIAKPSWIEKIVTYLEKNDHITAMG
HHHHHCCCCCEEEEEECCCCEEEECCCEEEECCHHHCCCCHHHHHHHHHHHCCCCEEEHH
SYLEIIVEKECGIIGSKYKTGDIWKNPLLHNDICEAMLFYNPIHNNTMIMRANVYREHKL
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCEEE
IFNKDYPYAEDYKFWSEVSRLGCLANYPEALVKYRLHGNQTSSVYNHKQMR
EEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]