| Definition | Haemophilus influenzae PittEE chromosome, complete genome. |
|---|---|
| Accession | NC_009566 |
| Length | 1,813,033 |
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The map label for this gene is yheS [C]
Identifier: 148826706
GI number: 148826706
Start: 1758171
End: 1760087
Strand: Direct
Name: yheS [C]
Synonym: CGSHiEE_08905
Alternate gene names: 148826706
Gene position: 1758171-1760087 (Clockwise)
Preceding gene: 148826705
Following gene: 148826707
Centisome position: 96.97
GC content: 40.64
Gene sequence:
>1917_bases ATGATTATATTTAGTAACTTATCCTTAAAACGAGGGCAAACGGAGCTTCTCGAAAATGCTTCTGCTACCATTAATCCTAA GCAAAAAGTCGGTTTGGTGGGGAAAAATGGTTGTGGAAAATCTTCGCTTTTTGCCTTATTAAAAAAAGAATTAACGCCAG AGGGCGGCGAGGTAAATTATCCGTCAAATTGGCGGGTGTCTTGGGTGAATCAAGAAACGCCTGCATTGGATATTTCTGCG ATTGATTATGTAATTCAAGGGGATCGTGAATATTGCCGTTTGCAACAAGAGCTTGAACAAGCAAATGAACGCAATGACGG TAACGCCATTGCGCGTATTCATGGACAATTAGAAACCTTGGATGCGTGGACAATTCAATCTCGTGCAGCTTCTTTATTGC ATGGTTTAGGATTTAGCCAAGAAGAAACAAGCCAGCCAGTGAAGGCTTTTTCGGGCGGTTGGCGGATGCGTTTAAATTTG GCACAAGCATTGCTTTGTCCATCAGATTTATTGTTACTTGATGAACCGACCAACCATTTGGATTTGGATGCGGTTATTTG GTTGGAGCGTTGGTTAGTGCAATATCAAGGCACCTTAGTATTAATTTCTCACGACCGTGATTTTCTCGATCCAATTGTGA CAAAAATCCTCCATATCGAAAATCAGAAGCTCAACGAATACACGGGCGATTATTCTTCTTTTGAGGTGCAACGAGCCACT AAATTGGCACAACAAACAGCCATGTATCGTCAGCAACAACAAAAGATTTCCCATTTACAAAAATATATTGATCGCTTTAA AGCCAAAGCCACCAAAGCCAAACAAGCACAAAGCCGTATGAAAGCATTGGAAAGAATGGAGCTGATTGCGCCTGCTTATG TGGATAATCCTTTTACCTTTGAATTTCGTCCGTCGCAATCTTTGCCAAATCCCTTAGTGATGATTGAGCAGGCGAGTGCA GGTTATGGTTGCGGAAAAAGTGCGGTAGAAATTTTAAGTAAAATTAAACTGAATTTGGTGCCAGGTTCGCGGATTGGTTT GCTCGGAAAAAATGGTGCGGGAAAATCAACCTTGATTAAACTTTTAGCGGGAGAACTGACCGCACTTTCAGGCACAGTGC AGTTGGCTAAAGGTGTGCAGCTTGGCTATTTTGCTCAGCATCAATTAGATACTTTACGTGCAGATGAATCTGCCCTGTGG CATATGCAAAAACTCGCACCAGAGCAAACGGAGCAACAGGTTCACGATTATTTGGGCAGTTTTGCGTTCCACGGCGATAA AGTAAATCAAGCAGTGAAATCCTTTTCTGGAGGAGAAAAAGCTCGTTTGGTGTTGGCTTTGATTGTTTGGCAACGCCCGA ATTTGTTATTACTTGATGAACCGACTAACCATTTGGATTTGGATATGCGTCAAGCATTAACGGAAGCATTGGTGGATTAC GAAGGTTCTTTGGTGGTGGTGTCTCACGATCGTCATTTATTACGCAATACCGTGGAAGAATTTTATTTAGTTCACGATAA AAAAGTGGAAGAATTTAAAGGCGATTTAGAAGACTATCAAAAATGGCTGAATGAACAAAACAGTACGTCTGAAAATAAAG TCTCAGAAAAAGTAGGCGATAATGAAAATTCGGTTCAAAATCGTAAGGAACAAAAACGCCGTGAAGCAGAGTTACGCCAA CAAACTGCACCATTACGTAAAAAAATCACGCAATTAGAAGAAAAAATGAATAAATTTTCTTCTGAGCTTGCGAGCATAGA AAATCAACTAGCAGATGCTGAATTATATAATGCCGAAAATAAAGAAAAATTAACCGCACTTTTGGCTCAACAAGTGGATG TGAAGAAAGCATTAGATGATGTGGAAACGGAATGGATAACCGCACAGGAAGAATTGGAAGAAATGCTTCAAGCATAA
Upstream 100 bases:
>100_bases TCATATTGATTTGTTACATTTTCGATAAAATCGGAATAGACTGTTCCGAGAAAAGAAAAAATATTGCAAAATAGCCTCAA ATTAAGACCTATGTAGAAAA
Downstream 100 bases:
>100_bases GGATAGATTATGAATCAAAGCCTTTTTCATCATAGCAAACAACAGGAATATTGCCCTCAATGTGGTGCGCCTTTGCAAAT TAAACAAGGCAAAAAAGGGC
Product: ABC transporter ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 638; Mature: 638
Protein sequence:
>638_residues MIIFSNLSLKRGQTELLENASATINPKQKVGLVGKNGCGKSSLFALLKKELTPEGGEVNYPSNWRVSWVNQETPALDISA IDYVIQGDREYCRLQQELEQANERNDGNAIARIHGQLETLDAWTIQSRAASLLHGLGFSQEETSQPVKAFSGGWRMRLNL AQALLCPSDLLLLDEPTNHLDLDAVIWLERWLVQYQGTLVLISHDRDFLDPIVTKILHIENQKLNEYTGDYSSFEVQRAT KLAQQTAMYRQQQQKISHLQKYIDRFKAKATKAKQAQSRMKALERMELIAPAYVDNPFTFEFRPSQSLPNPLVMIEQASA GYGCGKSAVEILSKIKLNLVPGSRIGLLGKNGAGKSTLIKLLAGELTALSGTVQLAKGVQLGYFAQHQLDTLRADESALW HMQKLAPEQTEQQVHDYLGSFAFHGDKVNQAVKSFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALVDY EGSLVVVSHDRHLLRNTVEEFYLVHDKKVEEFKGDLEDYQKWLNEQNSTSENKVSEKVGDNENSVQNRKEQKRREAELRQ QTAPLRKKITQLEEKMNKFSSELASIENQLADAELYNAENKEKLTALLAQQVDVKKALDDVETEWITAQEELEEMLQA
Sequences:
>Translated_638_residues MIIFSNLSLKRGQTELLENASATINPKQKVGLVGKNGCGKSSLFALLKKELTPEGGEVNYPSNWRVSWVNQETPALDISA IDYVIQGDREYCRLQQELEQANERNDGNAIARIHGQLETLDAWTIQSRAASLLHGLGFSQEETSQPVKAFSGGWRMRLNL AQALLCPSDLLLLDEPTNHLDLDAVIWLERWLVQYQGTLVLISHDRDFLDPIVTKILHIENQKLNEYTGDYSSFEVQRAT KLAQQTAMYRQQQQKISHLQKYIDRFKAKATKAKQAQSRMKALERMELIAPAYVDNPFTFEFRPSQSLPNPLVMIEQASA GYGCGKSAVEILSKIKLNLVPGSRIGLLGKNGAGKSTLIKLLAGELTALSGTVQLAKGVQLGYFAQHQLDTLRADESALW HMQKLAPEQTEQQVHDYLGSFAFHGDKVNQAVKSFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALVDY EGSLVVVSHDRHLLRNTVEEFYLVHDKKVEEFKGDLEDYQKWLNEQNSTSENKVSEKVGDNENSVQNRKEQKRREAELRQ QTAPLRKKITQLEEKMNKFSSELASIENQLADAELYNAENKEKLTALLAQQVDVKKALDDVETEWITAQEELEEMLQA >Mature_638_residues MIIFSNLSLKRGQTELLENASATINPKQKVGLVGKNGCGKSSLFALLKKELTPEGGEVNYPSNWRVSWVNQETPALDISA IDYVIQGDREYCRLQQELEQANERNDGNAIARIHGQLETLDAWTIQSRAASLLHGLGFSQEETSQPVKAFSGGWRMRLNL AQALLCPSDLLLLDEPTNHLDLDAVIWLERWLVQYQGTLVLISHDRDFLDPIVTKILHIENQKLNEYTGDYSSFEVQRAT KLAQQTAMYRQQQQKISHLQKYIDRFKAKATKAKQAQSRMKALERMELIAPAYVDNPFTFEFRPSQSLPNPLVMIEQASA GYGCGKSAVEILSKIKLNLVPGSRIGLLGKNGAGKSTLIKLLAGELTALSGTVQLAKGVQLGYFAQHQLDTLRADESALW HMQKLAPEQTEQQVHDYLGSFAFHGDKVNQAVKSFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALVDY EGSLVVVSHDRHLLRNTVEEFYLVHDKKVEEFKGDLEDYQKWLNEQNSTSENKVSEKVGDNENSVQNRKEQKRREAELRQ QTAPLRKKITQLEEKMNKFSSELASIENQLADAELYNAENKEKLTALLAQQVDVKKALDDVETEWITAQEELEEMLQA
Specific function: Unknown
COG id: COG0488
COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains [H]
Homologues:
Organism=Homo sapiens, GI10947137, Length=539, Percent_Identity=35.621521335807, Blast_Score=330, Evalue=2e-90, Organism=Homo sapiens, GI27881506, Length=539, Percent_Identity=35.621521335807, Blast_Score=330, Evalue=3e-90, Organism=Homo sapiens, GI148612853, Length=530, Percent_Identity=34.1509433962264, Blast_Score=328, Evalue=1e-89, Organism=Homo sapiens, GI10947135, Length=550, Percent_Identity=32.5454545454545, Blast_Score=251, Evalue=2e-66, Organism=Homo sapiens, GI69354671, Length=550, Percent_Identity=32.5454545454545, Blast_Score=250, Evalue=3e-66, Organism=Escherichia coli, GI1789751, Length=636, Percent_Identity=68.0817610062893, Blast_Score=910, Evalue=0.0, Organism=Escherichia coli, GI1787041, Length=529, Percent_Identity=33.0812854442344, Blast_Score=310, Evalue=2e-85, Organism=Escherichia coli, GI1787182, Length=626, Percent_Identity=28.4345047923323, Blast_Score=244, Evalue=2e-65, Organism=Escherichia coli, GI2367384, Length=531, Percent_Identity=29.5668549905838, Blast_Score=210, Evalue=3e-55, Organism=Escherichia coli, GI1788165, Length=196, Percent_Identity=32.6530612244898, Blast_Score=86, Evalue=9e-18, Organism=Escherichia coli, GI48994997, Length=227, Percent_Identity=24.6696035242291, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1788506, Length=259, Percent_Identity=25.0965250965251, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1787758, Length=200, Percent_Identity=24.5, Blast_Score=64, Evalue=3e-11, Organism=Escherichia coli, GI1788002, Length=186, Percent_Identity=32.258064516129, Blast_Score=64, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17553372, Length=539, Percent_Identity=36.5491651205937, Blast_Score=339, Evalue=2e-93, Organism=Caenorhabditis elegans, GI17555318, Length=532, Percent_Identity=33.2706766917293, Blast_Score=306, Evalue=2e-83, Organism=Caenorhabditis elegans, GI17559834, Length=539, Percent_Identity=32.4675324675325, Blast_Score=281, Evalue=7e-76, Organism=Caenorhabditis elegans, GI17541710, Length=198, Percent_Identity=29.7979797979798, Blast_Score=69, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6321121, Length=545, Percent_Identity=34.6788990825688, Blast_Score=334, Evalue=2e-92, Organism=Saccharomyces cerevisiae, GI6320874, Length=530, Percent_Identity=34.3396226415094, Blast_Score=313, Evalue=6e-86, Organism=Saccharomyces cerevisiae, GI6325030, Length=395, Percent_Identity=29.3670886075949, Blast_Score=156, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6324314, Length=388, Percent_Identity=29.3814432989691, Blast_Score=134, Evalue=6e-32, Organism=Saccharomyces cerevisiae, GI6323278, Length=388, Percent_Identity=27.8350515463918, Blast_Score=130, Evalue=5e-31, Organism=Drosophila melanogaster, GI24666836, Length=528, Percent_Identity=35.9848484848485, Blast_Score=366, Evalue=1e-101, Organism=Drosophila melanogaster, GI24642252, Length=546, Percent_Identity=36.8131868131868, Blast_Score=352, Evalue=7e-97, Organism=Drosophila melanogaster, GI18859989, Length=546, Percent_Identity=36.8131868131868, Blast_Score=352, Evalue=7e-97, Organism=Drosophila melanogaster, GI24641342, Length=541, Percent_Identity=32.902033271719, Blast_Score=292, Evalue=6e-79, Organism=Drosophila melanogaster, GI116007184, Length=159, Percent_Identity=36.4779874213836, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI221500365, Length=159, Percent_Identity=36.4779874213836, Blast_Score=68, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 72077; Mature: 72077
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIFSNLSLKRGQTELLENASATINPKQKVGLVGKNGCGKSSLFALLKKELTPEGGEVNY CEEEECCCCCCCHHHHHHCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC PSNWRVSWVNQETPALDISAIDYVIQGDREYCRLQQELEQANERNDGNAIARIHGQLETL CCCCEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHH DAWTIQSRAASLLHGLGFSQEETSQPVKAFSGGWRMRLNLAQALLCPSDLLLLDEPTNHL HHHHHHHHHHHHHHHCCCCHHHHCCCHHHHCCCCEEEHHHHHHHHCCCCEEEEECCCCCC DLDAVIWLERWLVQYQGTLVLISHDRDFLDPIVTKILHIENQKLNEYTGDYSSFEVQRAT CHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHH KLAQQTAMYRQQQQKISHLQKYIDRFKAKATKAKQAQSRMKALERMELIAPAYVDNPFTF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE EFRPSQSLPNPLVMIEQASAGYGCGKSAVEILSKIKLNLVPGSRIGLLGKNGAGKSTLIK EECCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHEEECCCCCEEEEECCCCCHHHHHH LLAGELTALSGTVQLAKGVQLGYFAQHQLDTLRADESALWHMQKLAPEQTEQQVHDYLGS HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHH FAFHGDKVNQAVKSFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALVDY HHCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCC EGSLVVVSHDRHLLRNTVEEFYLVHDKKVEEFKGDLEDYQKWLNEQNSTSENKVSEKVGD CCCEEEEECCHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHCCC NENSVQNRKEQKRREAELRQQTAPLRKKITQLEEKMNKFSSELASIENQLADAELYNAEN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC KEKLTALLAQQVDVKKALDDVETEWITAQEELEEMLQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIIFSNLSLKRGQTELLENASATINPKQKVGLVGKNGCGKSSLFALLKKELTPEGGEVNY CEEEECCCCCCCHHHHHHCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC PSNWRVSWVNQETPALDISAIDYVIQGDREYCRLQQELEQANERNDGNAIARIHGQLETL CCCCEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHH DAWTIQSRAASLLHGLGFSQEETSQPVKAFSGGWRMRLNLAQALLCPSDLLLLDEPTNHL HHHHHHHHHHHHHHHCCCCHHHHCCCHHHHCCCCEEEHHHHHHHHCCCCEEEEECCCCCC DLDAVIWLERWLVQYQGTLVLISHDRDFLDPIVTKILHIENQKLNEYTGDYSSFEVQRAT CHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHH KLAQQTAMYRQQQQKISHLQKYIDRFKAKATKAKQAQSRMKALERMELIAPAYVDNPFTF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE EFRPSQSLPNPLVMIEQASAGYGCGKSAVEILSKIKLNLVPGSRIGLLGKNGAGKSTLIK EECCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHEEECCCCCEEEEECCCCCHHHHHH LLAGELTALSGTVQLAKGVQLGYFAQHQLDTLRADESALWHMQKLAPEQTEQQVHDYLGS HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHH FAFHGDKVNQAVKSFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALVDY HHCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCC EGSLVVVSHDRHLLRNTVEEFYLVHDKKVEEFKGDLEDYQKWLNEQNSTSENKVSEKVGD CCCEEEEECCHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHCCC NENSVQNRKEQKRREAELRQQTAPLRKKITQLEEKMNKFSSELASIENQLADAELYNAEN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC KEKLTALLAQQVDVKKALDDVETEWITAQEELEEMLQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]