| Definition | Haemophilus influenzae PittEE chromosome, complete genome. |
|---|---|
| Accession | NC_009566 |
| Length | 1,813,033 |
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The map label for this gene is alaS [H]
Identifier: 148826541
GI number: 148826541
Start: 1583449
End: 1586073
Strand: Direct
Name: alaS [H]
Synonym: CGSHiEE_07990
Alternate gene names: 148826541
Gene position: 1583449-1586073 (Clockwise)
Preceding gene: 148826540
Following gene: 148826542
Centisome position: 87.34
GC content: 40.65
Gene sequence:
>2625_bases ATGAAAACAACAGCAGAAATAAGACAATCATTCCTTGATTTTTTCCATAGCAAAGGCCACCAAGTAGTTGAGAGTAGCTC ACTTGTGCCGGAAAATGATCCGACTTTGCTTTTCACAAATGCGGGGATGAACCAATTTAAGGATGTATTCCTTGGAATGG ATAAACGCCCTTATTCCAGAGCGACCACTGCGCAACGTTGCGTACGTGCTGGTGGTAAGCATAACGACTTAGAAAATGTT GGTTATACCGCGCGTCATCATACTTTCTTTGAAATGCTCGGTAACTTCAGTTTTGGCGATTACTTTAAACAGGATGCCAT TAATTTTGCTTGGGAATATTTAACTTCGCCACAATGGCTTGGTTTACCTAAAGAAAAACTCTGGGTAACCGTGTATGAAA CCGACGACGAAGCCTACAATATCTGGAATAAAGAAGTCGGTGTGCCTGCAGAACGTATTATTCGCATTGGTGACAATAAA AGCGCGCCTTACGCATCAGACAATTTCTGGGCAATGGGCGATACCGGTCCTTGCGGTCCTTGTACTGAAATTTTCTACGA TCACGGCGATCATATTTGGGGCGGCCCTCCAGGCTCACCAGAAGAAGATGGCGACCGTTATATTGAAATCTGGAACGTTG TGTTTATGCAGTTCAACCGTTTAGCAGATGGCACAATGGAAAAATTACCTCGTCCGTCTGTTGATACAGGTATGGGTTTA GAGCGTATTTCTGCTGTGTTGCAACATGTGAACTCAAACTACGAGATTGATATTTTCAAAACATTAATCGCAAAAACGGC GGAAATTGTAGGCGCAACAGATTTAACTAACAAATCACTACGTGTTATTGCTGACCATATTCGTTCTTGTGCATATTTAA TCGCCGATGGCGTTATCCCATCAAATGAAGGGCGTGGTTATGTCTTACGTCGTATTATTCGCCGCGCAGTTCGTCACGGT CACTTATTAGGTGCCAAAGAATCCTTTTTCTATAAACTTGTGCCAACTCTAATTGATGTAATGGCTGAAGCTGGAAAAGA TGTAAAAGCAAAACAAACAAATGTTGAAAAACTATTACGTTTAGAAGAAGAACAGTTTGCTCGCACACTGGAACGTGGGT TGAGTTTATTAGATGAAGCCCTTTCTCAAGTGAAAGATGGCATTCTTTCAGGTGAAGTTGCATTCAAACTTTATGATACT TATGGTTTCCCATTGGATTTAACAGCTGATGTATGTCGTGAGCGCAATATCACTATTGATGAACAAGCGTTTGATCGTGA AATGGAAGCTCAACGCACTCGCGCTCAAGCTGCTAGCCAGTTTGGTGTGGACTACAACAGCATTATTCGTGTAGATGGCG AAACTAAGTTTGAAGGCTATACTGAAGTAGAATCTCAGGCAAAAATTACCGCACTTTTCTATGATGGTAAATCAGTAGAA AGTATCGAAGCAGGTCAAAGTGCAGTCGTTATTTTAGAAAATACGCCATTTTATGCAGAATCAGGTGGTCAGATTGGCGA TAGCGGATATTTAAGCGCACAAGGTGTAACCTTTAATGTGAAAGATACCCAAAAATATGGGCAAGTATTTGGACACATTG GGGAATTAACGCAAGGAAGTTTGAAAGTTGGACAATCAGTGAATGCGATTGTGGATGCTAAACGTCGCCACAACACATCA CTCAATCACTCAGCGACACACTTATTGCATGCTGCCTTACGTCAAATTCTAGGTTTACACGTTGTGCAAAAAGGTTCGCT TGTTTCAGATAAAGCCTTGCGTTTTGACTTTGCACAACCAGAAGCCATTACAAAAGAACAATTAACTCAAATTGAAACAT TAGTAAACCAAAAAATCCGTGCTAACTTCCCTGTTCAAACGGATATTATGGATATTGATTCCGCAAAAGCGAAAGGAGCA ATGGCTCTCTTTGGCGAAAAATATGGCGATAAGGTTCGTGTATTAACGATGGGCGATTTCTCAATTGAGCTGTGTGGCGG TATTCACGCAAAACGCACAGGCGATATTGGTTTATTTAAAATTATTACTGAAAACGCAGTGGCTGCAGGCATTCGTCGTA TTGAAGCGATAACGGGTCAAAATGCCATTGACTGGTTACATAATCAACAACGCATTCTGACCCAAAGTGCAGACTTATTA AAATCAGACGTAAATACCTTAGTGGAAAAAATCCAACAACTTCAAGACAAAACGAAGAAAGTGGAAAAAGAATTACAAGG TCTAAAAGAAAAAGCCGCAATGCAGGCTGGTTCTGATTTTGTAAAAAGTGCGGTCAAAATCAACGGTGTTTCTGTTATTA CACAACAATTAGATGGTATAGAAACAAAATCATTACGCGTAATGGTCGATGATTTAAAAAATCAACTCGGATCAGGCGTA ATTGCATTTGCATCAATATTAGATGAAAAAGTTAATCTCGTCGTTGGAGTGACAAATGATTTAACCGCCAAAATAAAAGC TGGAGAACTTGTTAATTTAATGGCTCAACAAGTTGGAGGAAAAGGCGGTGGCCGTCCAGATATGGCAATGGCAGGAGGTT CCCAACCAGAAAATGTGGCACAAGCAATTAAAGTGGCACAAGACTGGTTAAACAAAAATCTGTAG
Upstream 100 bases:
>100_bases TGGAGTTTTGGCAAAAAGCCTTTTTATAAATTTCAAAAATATGCAAAAATAGGGCGTATTTAGTTTCTATTTTTATTATG GGTAACAAGGATTCTTTTTA
Downstream 100 bases:
>100_bases TACAAGCTGGTTGGTGGGATGCCAACCGTTCCTTGATTGATAGGATATCTAATAAATGCAAACTAAGGAGATAAAAGATG TTAATCTTAACTCGAAAAGT
Product: alanyl-tRNA synthetase
Products: NA
Alternate protein names: Alanine--tRNA ligase; AlaRS [H]
Number of amino acids: Translated: 874; Mature: 874
Protein sequence:
>874_residues MKTTAEIRQSFLDFFHSKGHQVVESSSLVPENDPTLLFTNAGMNQFKDVFLGMDKRPYSRATTAQRCVRAGGKHNDLENV GYTARHHTFFEMLGNFSFGDYFKQDAINFAWEYLTSPQWLGLPKEKLWVTVYETDDEAYNIWNKEVGVPAERIIRIGDNK SAPYASDNFWAMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNVVFMQFNRLADGTMEKLPRPSVDTGMGL ERISAVLQHVNSNYEIDIFKTLIAKTAEIVGATDLTNKSLRVIADHIRSCAYLIADGVIPSNEGRGYVLRRIIRRAVRHG HLLGAKESFFYKLVPTLIDVMAEAGKDVKAKQTNVEKLLRLEEEQFARTLERGLSLLDEALSQVKDGILSGEVAFKLYDT YGFPLDLTADVCRERNITIDEQAFDREMEAQRTRAQAASQFGVDYNSIIRVDGETKFEGYTEVESQAKITALFYDGKSVE SIEAGQSAVVILENTPFYAESGGQIGDSGYLSAQGVTFNVKDTQKYGQVFGHIGELTQGSLKVGQSVNAIVDAKRRHNTS LNHSATHLLHAALRQILGLHVVQKGSLVSDKALRFDFAQPEAITKEQLTQIETLVNQKIRANFPVQTDIMDIDSAKAKGA MALFGEKYGDKVRVLTMGDFSIELCGGIHAKRTGDIGLFKIITENAVAAGIRRIEAITGQNAIDWLHNQQRILTQSADLL KSDVNTLVEKIQQLQDKTKKVEKELQGLKEKAAMQAGSDFVKSAVKINGVSVITQQLDGIETKSLRVMVDDLKNQLGSGV IAFASILDEKVNLVVGVTNDLTAKIKAGELVNLMAQQVGGKGGGRPDMAMAGGSQPENVAQAIKVAQDWLNKNL
Sequences:
>Translated_874_residues MKTTAEIRQSFLDFFHSKGHQVVESSSLVPENDPTLLFTNAGMNQFKDVFLGMDKRPYSRATTAQRCVRAGGKHNDLENV GYTARHHTFFEMLGNFSFGDYFKQDAINFAWEYLTSPQWLGLPKEKLWVTVYETDDEAYNIWNKEVGVPAERIIRIGDNK SAPYASDNFWAMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNVVFMQFNRLADGTMEKLPRPSVDTGMGL ERISAVLQHVNSNYEIDIFKTLIAKTAEIVGATDLTNKSLRVIADHIRSCAYLIADGVIPSNEGRGYVLRRIIRRAVRHG HLLGAKESFFYKLVPTLIDVMAEAGKDVKAKQTNVEKLLRLEEEQFARTLERGLSLLDEALSQVKDGILSGEVAFKLYDT YGFPLDLTADVCRERNITIDEQAFDREMEAQRTRAQAASQFGVDYNSIIRVDGETKFEGYTEVESQAKITALFYDGKSVE SIEAGQSAVVILENTPFYAESGGQIGDSGYLSAQGVTFNVKDTQKYGQVFGHIGELTQGSLKVGQSVNAIVDAKRRHNTS LNHSATHLLHAALRQILGLHVVQKGSLVSDKALRFDFAQPEAITKEQLTQIETLVNQKIRANFPVQTDIMDIDSAKAKGA MALFGEKYGDKVRVLTMGDFSIELCGGIHAKRTGDIGLFKIITENAVAAGIRRIEAITGQNAIDWLHNQQRILTQSADLL KSDVNTLVEKIQQLQDKTKKVEKELQGLKEKAAMQAGSDFVKSAVKINGVSVITQQLDGIETKSLRVMVDDLKNQLGSGV IAFASILDEKVNLVVGVTNDLTAKIKAGELVNLMAQQVGGKGGGRPDMAMAGGSQPENVAQAIKVAQDWLNKNL >Mature_874_residues MKTTAEIRQSFLDFFHSKGHQVVESSSLVPENDPTLLFTNAGMNQFKDVFLGMDKRPYSRATTAQRCVRAGGKHNDLENV GYTARHHTFFEMLGNFSFGDYFKQDAINFAWEYLTSPQWLGLPKEKLWVTVYETDDEAYNIWNKEVGVPAERIIRIGDNK SAPYASDNFWAMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNVVFMQFNRLADGTMEKLPRPSVDTGMGL ERISAVLQHVNSNYEIDIFKTLIAKTAEIVGATDLTNKSLRVIADHIRSCAYLIADGVIPSNEGRGYVLRRIIRRAVRHG HLLGAKESFFYKLVPTLIDVMAEAGKDVKAKQTNVEKLLRLEEEQFARTLERGLSLLDEALSQVKDGILSGEVAFKLYDT YGFPLDLTADVCRERNITIDEQAFDREMEAQRTRAQAASQFGVDYNSIIRVDGETKFEGYTEVESQAKITALFYDGKSVE SIEAGQSAVVILENTPFYAESGGQIGDSGYLSAQGVTFNVKDTQKYGQVFGHIGELTQGSLKVGQSVNAIVDAKRRHNTS LNHSATHLLHAALRQILGLHVVQKGSLVSDKALRFDFAQPEAITKEQLTQIETLVNQKIRANFPVQTDIMDIDSAKAKGA MALFGEKYGDKVRVLTMGDFSIELCGGIHAKRTGDIGLFKIITENAVAAGIRRIEAITGQNAIDWLHNQQRILTQSADLL KSDVNTLVEKIQQLQDKTKKVEKELQGLKEKAAMQAGSDFVKSAVKINGVSVITQQLDGIETKSLRVMVDDLKNQLGSGV IAFASILDEKVNLVVGVTNDLTAKIKAGELVNLMAQQVGGKGGGRPDMAMAGGSQPENVAQAIKVAQDWLNKNL
Specific function: Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction:alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editin
COG id: COG0013
COG function: function code J; Alanyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI109148542, Length=976, Percent_Identity=36.1680327868852, Blast_Score=525, Evalue=1e-149, Organism=Homo sapiens, GI38569417, Length=797, Percent_Identity=37.1392722710163, Blast_Score=441, Evalue=1e-123, Organism=Homo sapiens, GI217416402, Length=391, Percent_Identity=23.5294117647059, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI13376886, Length=393, Percent_Identity=23.9185750636132, Blast_Score=81, Evalue=5e-15, Organism=Escherichia coli, GI1789048, Length=873, Percent_Identity=69.1867124856816, Blast_Score=1308, Evalue=0.0, Organism=Caenorhabditis elegans, GI17506981, Length=982, Percent_Identity=35.3360488798371, Blast_Score=518, Evalue=1e-147, Organism=Caenorhabditis elegans, GI17536681, Length=749, Percent_Identity=35.3805073431242, Blast_Score=416, Evalue=1e-116, Organism=Saccharomyces cerevisiae, GI6324911, Length=790, Percent_Identity=40.6329113924051, Blast_Score=541, Evalue=1e-154, Organism=Drosophila melanogaster, GI24582809, Length=975, Percent_Identity=37.1282051282051, Blast_Score=553, Evalue=1e-157, Organism=Drosophila melanogaster, GI45552267, Length=975, Percent_Identity=37.1282051282051, Blast_Score=553, Evalue=1e-157, Organism=Drosophila melanogaster, GI24658214, Length=891, Percent_Identity=29.96632996633, Blast_Score=352, Evalue=7e-97,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002318 - InterPro: IPR018162 - InterPro: IPR018165 - InterPro: IPR018164 - InterPro: IPR023033 - InterPro: IPR003156 - InterPro: IPR018163 - InterPro: IPR012947 [H]
Pfam domain/function: PF02272 DHHA1; PF01411 tRNA-synt_2c; PF07973 tRNA_SAD [H]
EC number: =6.1.1.7 [H]
Molecular weight: Translated: 96580; Mature: 96580
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: PS50860 AA_TRNA_LIGASE_II_ALA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTTAEIRQSFLDFFHSKGHQVVESSSLVPENDPTLLFTNAGMNQFKDVFLGMDKRPYSR CCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCHH ATTAQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAINFAWEYLTSPQWL HHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCC GLPKEKLWVTVYETDDEAYNIWNKEVGVPAERIIRIGDNKSAPYASDNFWAMGDTGPCGP CCCCCCEEEEEEECCCCHHHCCCCCCCCCHHHEEEECCCCCCCCCCCCCEECCCCCCCCH CTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNVVFMQFNRLADGTMEKLPRPSVDTGMGL HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCH ERISAVLQHVNSNYEIDIFKTLIAKTAEIVGATDLTNKSLRVIADHIRSCAYLIADGVIP HHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC SNEGRGYVLRRIIRRAVRHGHLLGAKESFFYKLVPTLIDVMAEAGKDVKAKQTNVEKLLR CCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LEEEQFARTLERGLSLLDEALSQVKDGILSGEVAFKLYDTYGFPLDLTADVCRERNITID HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHCCCCCCCC EQAFDREMEAQRTRAQAASQFGVDYNSIIRVDGETKFEGYTEVESQAKITALFYDGKSVE HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHCCCCEEEEEEECCCCCC SIEAGQSAVVILENTPFYAESGGQIGDSGYLSAQGVTFNVKDTQKYGQVFGHIGELTQGS HHHCCCCEEEEEECCCCEECCCCCCCCCCCEEECCEEEEECCHHHHHHHHHHHHHHCCCH LKVGQSVNAIVDAKRRHNTSLNHSATHLLHAALRQILGLHVVQKGSLVSDKALRFDFAQP HHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEECCCCC EAITKEQLTQIETLVNQKIRANFPVQTDIMDIDSAKAKGAMALFGEKYGDKVRVLTMGDF CHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCHHHHHHHHCCCEEEEEEECCC SIELCGGIHAKRTGDIGLFKIITENAVAAGIRRIEAITGQNAIDWLHNQQRILTQSADLL EEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH KSDVNTLVEKIQQLQDKTKKVEKELQGLKEKAAMQAGSDFVKSAVKINGVSVITQQLDGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHCCC ETKSLRVMVDDLKNQLGSGVIAFASILDEKVNLVVGVTNDLTAKIKAGELVNLMAQQVGG CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCEEEEEECCCCEEEECHHHHHHHHHHHHCC KGGGRPDMAMAGGSQPENVAQAIKVAQDWLNKNL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKTTAEIRQSFLDFFHSKGHQVVESSSLVPENDPTLLFTNAGMNQFKDVFLGMDKRPYSR CCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCHH ATTAQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAINFAWEYLTSPQWL HHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCC GLPKEKLWVTVYETDDEAYNIWNKEVGVPAERIIRIGDNKSAPYASDNFWAMGDTGPCGP CCCCCCEEEEEEECCCCHHHCCCCCCCCCHHHEEEECCCCCCCCCCCCCEECCCCCCCCH CTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNVVFMQFNRLADGTMEKLPRPSVDTGMGL HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCH ERISAVLQHVNSNYEIDIFKTLIAKTAEIVGATDLTNKSLRVIADHIRSCAYLIADGVIP HHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC SNEGRGYVLRRIIRRAVRHGHLLGAKESFFYKLVPTLIDVMAEAGKDVKAKQTNVEKLLR CCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LEEEQFARTLERGLSLLDEALSQVKDGILSGEVAFKLYDTYGFPLDLTADVCRERNITID HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHCCCCCCCC EQAFDREMEAQRTRAQAASQFGVDYNSIIRVDGETKFEGYTEVESQAKITALFYDGKSVE HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHCCCCEEEEEEECCCCCC SIEAGQSAVVILENTPFYAESGGQIGDSGYLSAQGVTFNVKDTQKYGQVFGHIGELTQGS HHHCCCCEEEEEECCCCEECCCCCCCCCCCEEECCEEEEECCHHHHHHHHHHHHHHCCCH LKVGQSVNAIVDAKRRHNTSLNHSATHLLHAALRQILGLHVVQKGSLVSDKALRFDFAQP HHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEECCCCC EAITKEQLTQIETLVNQKIRANFPVQTDIMDIDSAKAKGAMALFGEKYGDKVRVLTMGDF CHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCHHHHHHHHCCCEEEEEEECCC SIELCGGIHAKRTGDIGLFKIITENAVAAGIRRIEAITGQNAIDWLHNQQRILTQSADLL EEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH KSDVNTLVEKIQQLQDKTKKVEKELQGLKEKAAMQAGSDFVKSAVKINGVSVITQQLDGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHCCC ETKSLRVMVDDLKNQLGSGVIAFASILDEKVNLVVGVTNDLTAKIKAGELVNLMAQQVGG CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCEEEEEECCCCEEEECHHHHHHHHHHHHCC KGGGRPDMAMAGGSQPENVAQAIKVAQDWLNKNL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA