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The map label for this gene is cpxR [H]

Identifier: 148826516

GI number: 148826516

Start: 1561558

End: 1562241

Strand: Direct

Name: cpxR [H]

Synonym: CGSHiEE_07865

Alternate gene names: 148826516

Gene position: 1561558-1562241 (Clockwise)

Preceding gene: 148826515

Following gene: 148826517

Centisome position: 86.13

GC content: 34.8

Gene sequence:

>684_bases
ATGTCAAAACTCTTGCTCGTTGATGATGATATTGAATTGACTGAATTACTTTCTACACTTTTAGAGCTTGAGGGTTTTGA
CGTTGAAACAGCAAATAATGGATTAGAAGCATTACAAAAACTCAATGAAAGCTATAAGCTGGTTTTGCTTGATGTAATGA
TGCCAAAGTTAAATGGTATCGAAACATTAAAAGAAATTCGTAAAGTCTCTAACGTGCCAGTGATGATGCTAACAGCAAGA
GGCGAAGACATTGATCGCGTATTAGGCTTAGAATTGGGAGCGGATGATTATTTACCCAAGCCTTTTAACGATCGTGAACT
TATTGCAAGAATTAAGGCGATTTTGCGTCGTAGTGTATCTCCTTCAAATAATACCGCAAATGTAGAAATCCTTTCTTTTG
ACGGAATTACTCTCCACTTTTCTCACGGAATTGCAACCTATAATGAAGAAAATCTAAATTTAACTGATTATGAATTTAAG
ATTCTTTGTTTATTGCTTAAATCTAAGGGAAATGTGGTAAGTCGAGAAGAATTAAGTTTAGAAGTAATGGAAAAACCACT
AACCCCATTTGATCGTTCTCTTGATATGCACATCTCTAATTTAAGACGCAAATTACCAGAACGAAAAAACAAGCCATCTT
GGTTTAAAACTTTACGCGGAAAAGGATACGCTTTAGTTACCTAA

Upstream 100 bases:

>100_bases
TTGAAACAGGTGAGAAACCAAAATCAAGTTGGTGGAAATTCTGGAAATAATCTTTTTATTTTCACCGCACTACAATAATA
ATTGGTAAAAGGAATCCCCA

Downstream 100 bases:

>100_bases
TTTTTATGAAATTAGGTTATTTTTCAATTTAAATCAACTCACCATCCAAACATTTCTTATGTTTTGGTTTTCTTTTTTTC
ATAATGATGAGCCTTGTGAT

Product: nucleoid-associated protein NdpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MSKLLLVDDDIELTELLSTLLELEGFDVETANNGLEALQKLNESYKLVLLDVMMPKLNGIETLKEIRKVSNVPVMMLTAR
GEDIDRVLGLELGADDYLPKPFNDRELIARIKAILRRSVSPSNNTANVEILSFDGITLHFSHGIATYNEENLNLTDYEFK
ILCLLLKSKGNVVSREELSLEVMEKPLTPFDRSLDMHISNLRRKLPERKNKPSWFKTLRGKGYALVT

Sequences:

>Translated_227_residues
MSKLLLVDDDIELTELLSTLLELEGFDVETANNGLEALQKLNESYKLVLLDVMMPKLNGIETLKEIRKVSNVPVMMLTAR
GEDIDRVLGLELGADDYLPKPFNDRELIARIKAILRRSVSPSNNTANVEILSFDGITLHFSHGIATYNEENLNLTDYEFK
ILCLLLKSKGNVVSREELSLEVMEKPLTPFDRSLDMHISNLRRKLPERKNKPSWFKTLRGKGYALVT
>Mature_226_residues
SKLLLVDDDIELTELLSTLLELEGFDVETANNGLEALQKLNESYKLVLLDVMMPKLNGIETLKEIRKVSNVPVMMLTARG
EDIDRVLGLELGADDYLPKPFNDRELIARIKAILRRSVSPSNNTANVEILSFDGITLHFSHGIATYNEENLNLTDYEFKI
LCLLLKSKGNVVSREELSLEVMEKPLTPFDRSLDMHISNLRRKLPERKNKPSWFKTLRGKGYALVT

Specific function: Member of a two-component regulatory system [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI2367329, Length=230, Percent_Identity=59.5652173913044, Blast_Score=250, Evalue=5e-68,
Organism=Escherichia coli, GI1789809, Length=229, Percent_Identity=37.5545851528384, Blast_Score=155, Evalue=2e-39,
Organism=Escherichia coli, GI1786599, Length=229, Percent_Identity=38.8646288209607, Blast_Score=145, Evalue=2e-36,
Organism=Escherichia coli, GI1790860, Length=224, Percent_Identity=38.3928571428571, Blast_Score=140, Evalue=7e-35,
Organism=Escherichia coli, GI1788394, Length=222, Percent_Identity=35.5855855855856, Blast_Score=135, Evalue=2e-33,
Organism=Escherichia coli, GI1790863, Length=228, Percent_Identity=33.7719298245614, Blast_Score=134, Evalue=6e-33,
Organism=Escherichia coli, GI1786911, Length=226, Percent_Identity=34.5132743362832, Blast_Score=130, Evalue=6e-32,
Organism=Escherichia coli, GI87082012, Length=230, Percent_Identity=32.6086956521739, Blast_Score=117, Evalue=8e-28,
Organism=Escherichia coli, GI1786784, Length=226, Percent_Identity=33.6283185840708, Blast_Score=114, Evalue=4e-27,
Organism=Escherichia coli, GI1790552, Length=227, Percent_Identity=36.1233480176211, Blast_Score=113, Evalue=8e-27,
Organism=Escherichia coli, GI1789402, Length=230, Percent_Identity=34.3478260869565, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1787229, Length=230, Percent_Identity=30.4347826086957, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1787375, Length=223, Percent_Identity=28.6995515695067, Blast_Score=96, Evalue=1e-21,
Organism=Escherichia coli, GI145693140, Length=237, Percent_Identity=27.4261603375527, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1788550, Length=109, Percent_Identity=39.4495412844037, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI1790437, Length=132, Percent_Identity=37.8787878787879, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1788191, Length=120, Percent_Identity=35, Blast_Score=64, Evalue=6e-12,
Organism=Escherichia coli, GI1788905, Length=124, Percent_Identity=37.9032258064516, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI1790299, Length=136, Percent_Identity=31.6176470588235, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 25788; Mature: 25657

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLLLVDDDIELTELLSTLLELEGFDVETANNGLEALQKLNESYKLVLLDVMMPKLNGI
CCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEEHHHCCCCCH
ETLKEIRKVSNVPVMMLTARGEDIDRVLGLELGADDYLPKPFNDRELIARIKAILRRSVS
HHHHHHHHHCCCCEEEEEECCCCHHHHHHCEECCCCCCCCCCCHHHHHHHHHHHHHHCCC
PSNNTANVEILSFDGITLHFSHGIATYNEENLNLTDYEFKILCLLLKSKGNVVSREELSL
CCCCCCEEEEEEECCEEEEEECCEEEECCCCCCCCCHHHHHHEEEHHCCCCCCCHHHHHH
EVMEKPLTPFDRSLDMHISNLRRKLPERKNKPSWFKTLRGKGYALVT
HHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEC
>Mature Secondary Structure 
SKLLLVDDDIELTELLSTLLELEGFDVETANNGLEALQKLNESYKLVLLDVMMPKLNGI
CCEEEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEEHHHCCCCCH
ETLKEIRKVSNVPVMMLTARGEDIDRVLGLELGADDYLPKPFNDRELIARIKAILRRSVS
HHHHHHHHHCCCCEEEEEECCCCHHHHHHCEECCCCCCCCCCCHHHHHHHHHHHHHHCCC
PSNNTANVEILSFDGITLHFSHGIATYNEENLNLTDYEFKILCLLLKSKGNVVSREELSL
CCCCCCEEEEEEECCEEEEEECCEEEECCCCCCCCCHHHHHHEEEHHCCCCCCCHHHHHH
EVMEKPLTPFDRSLDMHISNLRRKLPERKNKPSWFKTLRGKGYALVT
HHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]