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The map label for this gene is ndpA [C]

Identifier: 148826514

GI number: 148826514

Start: 1560012

End: 1561028

Strand: Direct

Name: ndpA [C]

Synonym: CGSHiEE_07855

Alternate gene names: 148826514

Gene position: 1560012-1561028 (Clockwise)

Preceding gene: 148826511

Following gene: 148826515

Centisome position: 86.04

GC content: 35.3

Gene sequence:

>1017_bases
ATGAGTATTACCGTTAATCAAATTGTTTTGCATCAGTTAGTCAAAAATATGGATGGCGACAGCATAAAAATGGAAAGCGT
ATTACGCGACGAGTTGCTGTCCATTACACCAGAAGTAGAACAAATGATGTTGCAATTGCATCAAGGCTATCAAAATAAAG
CTAAGGCTTTTGGCGTGTTTCAGGAAAAGTCTATATTTGCACAACATTTAAATCGTTTATTAGAGCAAGAAATTGAGTTT
TTGGGTTTTAGTCAATATTCAACAAAATTGCTTGCAGATGAGCTAGGTAAATATAACTTTGCTGAAAGTGGCACCTTGAT
TTTATGTCAATATAATTTCTTAGCGACAGATTATTTGTTTATTGCATTGCTTGATAGCCGTCATAGTATGTTAGTCGATG
AGCATTTAGATATTCGCCGTACAGAATATTTGGATATTACTCAGTTTGATATTGCGGCACGGATAAATTTGACGGATTTG
CAAGTAAACGCGAACTCTAATCGTTATTTAACCTTTATAAAAGGCCGTGTTGGTCGCAAAATTAGTGATTTTTTTATGGA
TTTTTTAGGTGCCGAAGAAGGATTAAATCCACAAGTTCAAAATCAATGTTTATTGCAAGCTGTGAGTGATTACTGCGATC
AAGGCGAACTCAACAAAGAGCAAACTCAAGCGGTAAAAAAACAAGTGTTTGAATATTGTAAAGGTCAGCTTTCAAATGGT
AACAATATTGAATTAAGGGAACTTTCTGATTCATTACCCACTCTAAACGAACAGCCTTTTGTCGTCTTTACGGAAGAACA
GAATTATGGTTTGGAAGAGAGTATTCCACCAATACGTTCAACATTGAAATCGCTAACAAAATTCTCTGGGTCAGGAAAGG
GCGTTACCCTAAGTTTTGATGCGGAATTATTGAATACACGTATTCAATGGGATCCTATGACAGATACCCTAACCATCAAA
GGCTTACCACCAAATTTAAAAGATCAATTACAAAAGGCTTTACAATCAGAGAATTAA

Upstream 100 bases:

>100_bases
CTTATGATACCCGATTATTTGGTAGAACCTAAATAATTTCTTTTTTCTTGCTGAAAAAGTGCGGTTATAATTTGCGGCAA
ATTTTTCAAAGGTGACAAAA

Downstream 100 bases:

>100_bases
TTTGGAAATACACCCAATTTTGGATATTATTTGACAGAACTTTTGCACAAATTAAGGTAAAGAAAATGCAAGTTAAAACA
CTTTTAGGCGCAACCTTTTT

Product: nucleoid-associated protein NdpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MSITVNQIVLHQLVKNMDGDSIKMESVLRDELLSITPEVEQMMLQLHQGYQNKAKAFGVFQEKSIFAQHLNRLLEQEIEF
LGFSQYSTKLLADELGKYNFAESGTLILCQYNFLATDYLFIALLDSRHSMLVDEHLDIRRTEYLDITQFDIAARINLTDL
QVNANSNRYLTFIKGRVGRKISDFFMDFLGAEEGLNPQVQNQCLLQAVSDYCDQGELNKEQTQAVKKQVFEYCKGQLSNG
NNIELRELSDSLPTLNEQPFVVFTEEQNYGLEESIPPIRSTLKSLTKFSGSGKGVTLSFDAELLNTRIQWDPMTDTLTIK
GLPPNLKDQLQKALQSEN

Sequences:

>Translated_338_residues
MSITVNQIVLHQLVKNMDGDSIKMESVLRDELLSITPEVEQMMLQLHQGYQNKAKAFGVFQEKSIFAQHLNRLLEQEIEF
LGFSQYSTKLLADELGKYNFAESGTLILCQYNFLATDYLFIALLDSRHSMLVDEHLDIRRTEYLDITQFDIAARINLTDL
QVNANSNRYLTFIKGRVGRKISDFFMDFLGAEEGLNPQVQNQCLLQAVSDYCDQGELNKEQTQAVKKQVFEYCKGQLSNG
NNIELRELSDSLPTLNEQPFVVFTEEQNYGLEESIPPIRSTLKSLTKFSGSGKGVTLSFDAELLNTRIQWDPMTDTLTIK
GLPPNLKDQLQKALQSEN
>Mature_337_residues
SITVNQIVLHQLVKNMDGDSIKMESVLRDELLSITPEVEQMMLQLHQGYQNKAKAFGVFQEKSIFAQHLNRLLEQEIEFL
GFSQYSTKLLADELGKYNFAESGTLILCQYNFLATDYLFIALLDSRHSMLVDEHLDIRRTEYLDITQFDIAARINLTDLQ
VNANSNRYLTFIKGRVGRKISDFFMDFLGAEEGLNPQVQNQCLLQAVSDYCDQGELNKEQTQAVKKQVFEYCKGQLSNGN
NIELRELSDSLPTLNEQPFVVFTEEQNYGLEESIPPIRSTLKSLTKFSGSGKGVTLSFDAELLNTRIQWDPMTDTLTIKG
LPPNLKDQLQKALQSEN

Specific function: Unknown

COG id: COG3081

COG function: function code R; Nucleoid-associated protein

Gene ontology:

Cell location: Cytoplasm, nucleoid

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YejK family

Homologues:

Organism=Escherichia coli, GI1788513, Length=338, Percent_Identity=52.6627218934911, Blast_Score=353, Evalue=1e-98,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NDPA_HAEIE (A5UDN3)

Other databases:

- EMBL:   CP000671
- RefSeq:   YP_001291267.1
- STRING:   A5UDN3
- GeneID:   5226106
- GenomeReviews:   CP000671_GR
- KEGG:   hip:CGSHiEE_07855
- eggNOG:   COG3081
- HOGENOM:   HBG296787
- OMA:   TDYLFIA
- ProtClustDB:   PRK00378
- BioCyc:   HINF374930:CGSHIEE_07855-MONOMER
- GO:   GO:0005737
- GO:   GO:0009295
- HAMAP:   MF_00730
- InterPro:   IPR007358

Pfam domain/function: PF04245 NA37

EC number: NA

Molecular weight: Translated: 38531; Mature: 38400

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSITVNQIVLHQLVKNMDGDSIKMESVLRDELLSITPEVEQMMLQLHQGYQNKAKAFGVF
CCEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHCCH
QEKSIFAQHLNRLLEQEIEFLGFSQYSTKLLADELGKYNFAESGTLILCQYNFLATDYLF
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECHHHHHHHH
IALLDSRHSMLVDEHLDIRRTEYLDITQFDIAARINLTDLQVNANSNRYLTFIKGRVGRK
HHHHHCCCHHHHHCCCCCCHHCCCCEEEEEEEEEEEEEEEEEECCCCEEEEEECCHHCCH
ISDFFMDFLGAEEGLNPQVQNQCLLQAVSDYCDQGELNKEQTQAVKKQVFEYCKGQLSNG
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCC
NNIELRELSDSLPTLNEQPFVVFTEEQNYGLEESIPPIRSTLKSLTKFSGSGKGVTLSFD
CCEEHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEC
AELLNTRIQWDPMTDTLTIKGLPPNLKDQLQKALQSEN
HHHHCCEEEECCCCCEEEEECCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
SITVNQIVLHQLVKNMDGDSIKMESVLRDELLSITPEVEQMMLQLHQGYQNKAKAFGVF
CEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHCCH
QEKSIFAQHLNRLLEQEIEFLGFSQYSTKLLADELGKYNFAESGTLILCQYNFLATDYLF
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECHHHHHHHH
IALLDSRHSMLVDEHLDIRRTEYLDITQFDIAARINLTDLQVNANSNRYLTFIKGRVGRK
HHHHHCCCHHHHHCCCCCCHHCCCCEEEEEEEEEEEEEEEEEECCCCEEEEEECCHHCCH
ISDFFMDFLGAEEGLNPQVQNQCLLQAVSDYCDQGELNKEQTQAVKKQVFEYCKGQLSNG
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCC
NNIELRELSDSLPTLNEQPFVVFTEEQNYGLEESIPPIRSTLKSLTKFSGSGKGVTLSFD
CCEEHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEC
AELLNTRIQWDPMTDTLTIKGLPPNLKDQLQKALQSEN
HHHHCCEEEECCCCCEEEEECCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA