Click here to switch to the map view.

The map label for this gene is yaaA [C]

Identifier: 148826368

GI number: 148826368

Start: 1404920

End: 1405696

Strand: Direct

Name: yaaA [C]

Synonym: CGSHiEE_07045

Alternate gene names: 148826368

Gene position: 1404920-1405696 (Clockwise)

Preceding gene: 148826367

Following gene: 148826369

Centisome position: 77.49

GC content: 36.42

Gene sequence:

>777_bases
ATGTTAGCGATTATCTCCCCTGCCAAAACTCTTGATTTTGAAAGTGCGGTAAAAAATTTTCCTGTTTCTCAACCGCACTT
TACCGATTACAGCGAACAACTTATTGAAGTTTGTCGTAAACTTTCTCCACAAGATCTTTCATCGCTTATGTCTATCAGCG
ATAAGTTGGCTGGTTTAAATGCTGCACGCTTTGCAGAATGGACAAAAATTCACAATGAAAACAATTCCCGCCCTGCACTC
TTTGCATTTAAAGGCGATGTTTATACGGGTTTAGATGCTGATTCCCTTTCGGAAGATGATGTCATTTTTGCGCAATCCCA
TTTACGTATGCTGTCTGGGCTTTATGGGCTTTTAAAACCACTTGATTTAATGCAACCTTACCGATTAGAAATGGGGACAA
AATTAGCCAATCCGAAAGGAAAAGATCTGTATGCCTTTTGGGGAAATGTGATCACCCAAGCAGTTCAACAAGCTATTGAT
GCACAAGGCGATAATGTGTTAGTCAATCTAGCCTCTGACGAATATTATAAATCTGTTAAAGAAAGCCAAATTAACGCTAA
AATTATTAAGCCAGTTTTCTTAGATAATAAAAATGGCAAATACAAAGTAATCAGCTTTTATGCTAAAAAAGCGCGAGGCT
TAATGTGTCGCTATATTATTCAACATCATTTAACTGAAATTGAACAGTTAAAAGAATTTGATTTAGGTGGTTATTGGTTT
GATTCAGCATCCTCCACTGAAACTGAATTTGTCTTTAAGCGAGATATTAATGAATAA

Upstream 100 bases:

>100_bases
TTGCAAGATCTCATCATGAGTGAAAATGGGTTATATAAACGCGTTTAGTGTAAATTTTTATGCTAAGATACGCCCATTCT
TTTTTCATAAAAGGACGATT

Downstream 100 bases:

>100_bases
AATTTTTGTTATTTTGACCGCACTTATACTTTCAGGCTGTGCAACTAAGCTGACGCAATTAAATGTACCTACGCAGTTAG
AACATAATGGAAAACATTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MLAIISPAKTLDFESAVKNFPVSQPHFTDYSEQLIEVCRKLSPQDLSSLMSISDKLAGLNAARFAEWTKIHNENNSRPAL
FAFKGDVYTGLDADSLSEDDVIFAQSHLRMLSGLYGLLKPLDLMQPYRLEMGTKLANPKGKDLYAFWGNVITQAVQQAID
AQGDNVLVNLASDEYYKSVKESQINAKIIKPVFLDNKNGKYKVISFYAKKARGLMCRYIIQHHLTEIEQLKEFDLGGYWF
DSASSTETEFVFKRDINE

Sequences:

>Translated_258_residues
MLAIISPAKTLDFESAVKNFPVSQPHFTDYSEQLIEVCRKLSPQDLSSLMSISDKLAGLNAARFAEWTKIHNENNSRPAL
FAFKGDVYTGLDADSLSEDDVIFAQSHLRMLSGLYGLLKPLDLMQPYRLEMGTKLANPKGKDLYAFWGNVITQAVQQAID
AQGDNVLVNLASDEYYKSVKESQINAKIIKPVFLDNKNGKYKVISFYAKKARGLMCRYIIQHHLTEIEQLKEFDLGGYWF
DSASSTETEFVFKRDINE
>Mature_258_residues
MLAIISPAKTLDFESAVKNFPVSQPHFTDYSEQLIEVCRKLSPQDLSSLMSISDKLAGLNAARFAEWTKIHNENNSRPAL
FAFKGDVYTGLDADSLSEDDVIFAQSHLRMLSGLYGLLKPLDLMQPYRLEMGTKLANPKGKDLYAFWGNVITQAVQQAID
AQGDNVLVNLASDEYYKSVKESQINAKIIKPVFLDNKNGKYKVISFYAKKARGLMCRYIIQHHLTEIEQLKEFDLGGYWF
DSASSTETEFVFKRDINE

Specific function: Unknown

COG id: COG3022

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0246 family [H]

Homologues:

Organism=Escherichia coli, GI1786187, Length=254, Percent_Identity=62.5984251968504, Blast_Score=334, Evalue=3e-93,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005583 [H]

Pfam domain/function: PF03883 DUF328 [H]

EC number: NA

Molecular weight: Translated: 29197; Mature: 29197

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAIISPAKTLDFESAVKNFPVSQPHFTDYSEQLIEVCRKLSPQDLSSLMSISDKLAGLN
CEEEECCHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
AARFAEWTKIHNENNSRPALFAFKGDVYTGLDADSLSEDDVIFAQSHLRMLSGLYGLLKP
HHHHHHHHHHHCCCCCCCEEEEEECCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LDLMQPYRLEMGTKLANPKGKDLYAFWGNVITQAVQQAIDAQGDNVLVNLASDEYYKSVK
HHHCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHH
ESQINAKIIKPVFLDNKNGKYKVISFYAKKARGLMCRYIIQHHLTEIEQLKEFDLGGYWF
HHHCCCEEECEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
DSASSTETEFVFKRDINE
CCCCCCCHHEEECCCCCC
>Mature Secondary Structure
MLAIISPAKTLDFESAVKNFPVSQPHFTDYSEQLIEVCRKLSPQDLSSLMSISDKLAGLN
CEEEECCHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
AARFAEWTKIHNENNSRPALFAFKGDVYTGLDADSLSEDDVIFAQSHLRMLSGLYGLLKP
HHHHHHHHHHHCCCCCCCEEEEEECCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LDLMQPYRLEMGTKLANPKGKDLYAFWGNVITQAVQQAIDAQGDNVLVNLASDEYYKSVK
HHHCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHH
ESQINAKIIKPVFLDNKNGKYKVISFYAKKARGLMCRYIIQHHLTEIEQLKEFDLGGYWF
HHHCCCEEECEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
DSASSTETEFVFKRDINE
CCCCCCCHHEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA