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The map label for this gene is ygdD [C]

Identifier: 148826315

GI number: 148826315

Start: 1328050

End: 1328424

Strand: Direct

Name: ygdD [C]

Synonym: CGSHiEE_06720

Alternate gene names: 148826315

Gene position: 1328050-1328424 (Clockwise)

Preceding gene: 148826314

Following gene: 148826316

Centisome position: 73.25

GC content: 36.8

Gene sequence:

>375_bases
ATGAAAAACAAATACCTTACTCTTGTTGCTTTAAGCGGATTCTTCTGTGTCGCACTAGGCGCATTTGCAGCGCATGGTTT
AAAGAATATTTTAGATGTTAAAGCATTATCATGGATTGATACGGGGTTAGAATATCAAATGTTCCATATCATTGCAGTAC
TTGCCGTTGCATTATCTGCTTTACGTGACAACCAATTCGCACGATTATCCATGTCTTCTTGGTTAATTGGAATCTTATTA
TTCAGTGGAAGTTTATACGCACTTGCTTTCGAAGCAAGTAATGTAATTGTATGGATTACGCCTATTGGCGGCACTTTATT
TTTAATCGGATGGATTAGCTTAGCTTACGGAAGTTTCAAAAGTAAATCGCTATGA

Upstream 100 bases:

>100_bases
GCTTATCGGCACAATTATTGGTGTAGCATTTTTAGGTGGAATTCCCGTTGGCCCACTTATTGCTGCAGGTATATTAGCTT
TATTTTTAGGGAAAATTTAA

Downstream 100 bases:

>100_bases
AAAACAGCTCGGTAAAACACACATTAACTCCCTTACAACAATCTCTTTTTTCTCAATTAAATGACATCATGCTGGTGGAT
CAACGTCGCTTATCCGCCTG

Product: CTP synthetase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MKNKYLTLVALSGFFCVALGAFAAHGLKNILDVKALSWIDTGLEYQMFHIIAVLAVALSALRDNQFARLSMSSWLIGILL
FSGSLYALAFEASNVIVWITPIGGTLFLIGWISLAYGSFKSKSL

Sequences:

>Translated_124_residues
MKNKYLTLVALSGFFCVALGAFAAHGLKNILDVKALSWIDTGLEYQMFHIIAVLAVALSALRDNQFARLSMSSWLIGILL
FSGSLYALAFEASNVIVWITPIGGTLFLIGWISLAYGSFKSKSL
>Mature_124_residues
MKNKYLTLVALSGFFCVALGAFAAHGLKNILDVKALSWIDTGLEYQMFHIIAVLAVALSALRDNQFARLSMSSWLIGILL
FSGSLYALAFEASNVIVWITPIGGTLFLIGWISLAYGSFKSKSL

Specific function: Unknown

COG id: COG2363

COG function: function code S; Uncharacterized small membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0382 family [H]

Homologues:

Organism=Escherichia coli, GI1789172, Length=124, Percent_Identity=41.1290322580645, Blast_Score=84, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006696 [H]

Pfam domain/function: PF04241 DUF423 [H]

EC number: NA

Molecular weight: Translated: 13494; Mature: 13494

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKYLTLVALSGFFCVALGAFAAHGLKNILDVKALSWIDTGLEYQMFHIIAVLAVALSA
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LRDNQFARLSMSSWLIGILLFSGSLYALAFEASNVIVWITPIGGTLFLIGWISLAYGSFK
HCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHCCCC
SKSL
CCCC
>Mature Secondary Structure
MKNKYLTLVALSGFFCVALGAFAAHGLKNILDVKALSWIDTGLEYQMFHIIAVLAVALSA
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LRDNQFARLSMSSWLIGILLFSGSLYALAFEASNVIVWITPIGGTLFLIGWISLAYGSFK
HCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHCCCC
SKSL
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]