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The map label for this gene is oppA [H]

Identifier: 148826262

GI number: 148826262

Start: 1274849

End: 1276486

Strand: Direct

Name: oppA [H]

Synonym: CGSHiEE_06425

Alternate gene names: 148826262

Gene position: 1274849-1276486 (Clockwise)

Preceding gene: 148826260

Following gene: 148826263

Centisome position: 70.32

GC content: 40.6

Gene sequence:

>1638_bases
ATGCAACACAAACTACTCTTCTCTGCAATCGCTCTTGCTCTTTCCTATTCTGCGCAAGCAGTTATAGTGCCTGAAGGAAC
ACAATTAGATGAAAAACAGCATATCGTGTTCAATAATGGGGCTGAACCACAAAGTTTTGACCCACACAAAACCGAAGGTG
TGCCAGAATCCAACGTTGCTTATCAATTACTTGAAGGCTTAGTCACCTCAGACTCTGAAGGTAAACTTCAACCGGGTGTG
GCTGAAAGCTGGGAAAATACACCTGACTTCAAAACCTGGACATTCCATTTACGTAAAGATGCTAAATGGTCAAACGGAGA
TCCTGTTACTGCACATGATTTCGTGTTTGCGTGGCGTCGTTTAGTGGATCCTGCAACTGCTGCACCTTACGCGAGTTACC
TAAGTTATTTACAAGTTGAAAATGCACAAGACATTATTGACGGTAAGAAAAAACCGGCTGAATTAGGCGTGGAAGCAAAA
GATGATTACACCTTTGTGGTTCATGCAACCAATCCTGTGCCTTATGCAGTCAGTTTAACGACTCACCAATCCTTATTGCC
ATTACCACAAAAAGTAGTCGAAAAATTGGGTGATGCATGGGTGAAAAAAGAAAACTACGTGGGTAACGGTGCTTATAAGT
TGGCTAACCACATCATTAACGAAAAAATCGAATTTGAACGTAACCCACTTTATTGGAACGATAAAGAAACCGTAATCAAT
AGCGCGACATTCCTCGCCATTGAAAACCCAAGTACCGATGTAGCGCGTTATCGTGCGGGCGATTTAGACATGACCAGTTA
TGGTTTACCGCCAGAACAATTCGCTAAATTACAAAAAGAATTGCCAGGCGAAGTATACGTTACTCGTACCCTAGGAACTT
ATTCTTATGAATTAAACAATAAGAAAGCACCTTTTGATAACGTGAATATTCGTAAAGCCTTGAACTTATCCCTTGATCGT
CATGTGATCACAGATAAAGTATTGGGCCAAGGTCAAACACCAACCTATGTGTTTACTCCAACTTACATCGAAGAAGGCCA
TCTCATTCAACAACCTGCTTATTCAAAAGAACCGATGGCACAACGTAATGAAGAAGCCATTAAACTCTTAGAAGAAGCTG
GTTACAGTAAAGCGAATCCGTTGAAATTCAGCATTCTTTATAATACCAATGAAAACCACAAAAAAGTGGCTATTGCTGCA
GCTTCTATGTGGAAAGCGAACACCAAAGGTTTGATTGATGTGAAATTAGAAAACCAAGAGTGGAAAACTTACATTGATAG
CCGTCGTGCAGGTCGTTACGATGCGGCACGTGCAGGATGGAGTGCGGATTACAACCAAGCAACAACATTCGGCAACTATT
TCTTATCTAATTCTAGTAACAATACTGCGAAATACGCGAATCCAGAATATGATAAAGCGATGGCAGAATCTTACGCAGCA
ACTGATGCAGAAGGTCGTGCAGAAGGTCGTGCAAAAGCTTATGCGAAAGCTGAAGAAATTCTTGCAAAAGATTACGGTAT
CGTACCAATCTTTAACTATGTAAATCCACGCTTAGTGAAACCTTACGTAAAAGGTTATTCAGGCAAAGATCCGCAAGATC
ACATCTACTTACGAAACCTTTATATTATTAAACATTAA

Upstream 100 bases:

>100_bases
CTTCAAATAATTTCCTGACAAATCTTTACAAAAATGAATTTTTGAGCTAATAAGTAGAAGACTTTTTATAAAAATATCGC
CTAATGACAAGGAGGCTCAA

Downstream 100 bases:

>100_bases
TTCGTTGCTCGTATTTAAGTGCGGTTAAAAATCGTCGTATTTTTTGACCGCACTTTTCGCCCATTTTGGTTGGAGTTGTT
ATGCTCAAGTTTATTTTTAA

Product: transaldolase B

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 545; Mature: 545

Protein sequence:

>545_residues
MQHKLLFSAIALALSYSAQAVIVPEGTQLDEKQHIVFNNGAEPQSFDPHKTEGVPESNVAYQLLEGLVTSDSEGKLQPGV
AESWENTPDFKTWTFHLRKDAKWSNGDPVTAHDFVFAWRRLVDPATAAPYASYLSYLQVENAQDIIDGKKKPAELGVEAK
DDYTFVVHATNPVPYAVSLTTHQSLLPLPQKVVEKLGDAWVKKENYVGNGAYKLANHIINEKIEFERNPLYWNDKETVIN
SATFLAIENPSTDVARYRAGDLDMTSYGLPPEQFAKLQKELPGEVYVTRTLGTYSYELNNKKAPFDNVNIRKALNLSLDR
HVITDKVLGQGQTPTYVFTPTYIEEGHLIQQPAYSKEPMAQRNEEAIKLLEEAGYSKANPLKFSILYNTNENHKKVAIAA
ASMWKANTKGLIDVKLENQEWKTYIDSRRAGRYDAARAGWSADYNQATTFGNYFLSNSSNNTAKYANPEYDKAMAESYAA
TDAEGRAEGRAKAYAKAEEILAKDYGIVPIFNYVNPRLVKPYVKGYSGKDPQDHIYLRNLYIIKH

Sequences:

>Translated_545_residues
MQHKLLFSAIALALSYSAQAVIVPEGTQLDEKQHIVFNNGAEPQSFDPHKTEGVPESNVAYQLLEGLVTSDSEGKLQPGV
AESWENTPDFKTWTFHLRKDAKWSNGDPVTAHDFVFAWRRLVDPATAAPYASYLSYLQVENAQDIIDGKKKPAELGVEAK
DDYTFVVHATNPVPYAVSLTTHQSLLPLPQKVVEKLGDAWVKKENYVGNGAYKLANHIINEKIEFERNPLYWNDKETVIN
SATFLAIENPSTDVARYRAGDLDMTSYGLPPEQFAKLQKELPGEVYVTRTLGTYSYELNNKKAPFDNVNIRKALNLSLDR
HVITDKVLGQGQTPTYVFTPTYIEEGHLIQQPAYSKEPMAQRNEEAIKLLEEAGYSKANPLKFSILYNTNENHKKVAIAA
ASMWKANTKGLIDVKLENQEWKTYIDSRRAGRYDAARAGWSADYNQATTFGNYFLSNSSNNTAKYANPEYDKAMAESYAA
TDAEGRAEGRAKAYAKAEEILAKDYGIVPIFNYVNPRLVKPYVKGYSGKDPQDHIYLRNLYIIKH
>Mature_545_residues
MQHKLLFSAIALALSYSAQAVIVPEGTQLDEKQHIVFNNGAEPQSFDPHKTEGVPESNVAYQLLEGLVTSDSEGKLQPGV
AESWENTPDFKTWTFHLRKDAKWSNGDPVTAHDFVFAWRRLVDPATAAPYASYLSYLQVENAQDIIDGKKKPAELGVEAK
DDYTFVVHATNPVPYAVSLTTHQSLLPLPQKVVEKLGDAWVKKENYVGNGAYKLANHIINEKIEFERNPLYWNDKETVIN
SATFLAIENPSTDVARYRAGDLDMTSYGLPPEQFAKLQKELPGEVYVTRTLGTYSYELNNKKAPFDNVNIRKALNLSLDR
HVITDKVLGQGQTPTYVFTPTYIEEGHLIQQPAYSKEPMAQRNEEAIKLLEEAGYSKANPLKFSILYNTNENHKKVAIAA
ASMWKANTKGLIDVKLENQEWKTYIDSRRAGRYDAARAGWSADYNQATTFGNYFLSNSSNNTAKYANPEYDKAMAESYAA
TDAEGRAEGRAKAYAKAEEILAKDYGIVPIFNYVNPRLVKPYVKGYSGKDPQDHIYLRNLYIIKH

Specific function: This protein is a component of the oligopeptide permease, a binding protein-dependent transport system, it binds peptides up to five amino acids long with high affinity [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787495, Length=535, Percent_Identity=52.8971962616822, Blast_Score=566, Evalue=1e-162,
Organism=Escherichia coli, GI87081878, Length=550, Percent_Identity=43.0909090909091, Blast_Score=457, Evalue=1e-130,
Organism=Escherichia coli, GI1789397, Length=540, Percent_Identity=38.8888888888889, Blast_Score=384, Evalue=1e-107,
Organism=Escherichia coli, GI1787762, Length=532, Percent_Identity=25.9398496240602, Blast_Score=121, Evalue=1e-28,
Organism=Escherichia coli, GI1789887, Length=444, Percent_Identity=25.6756756756757, Blast_Score=103, Evalue=3e-23,
Organism=Escherichia coli, GI1789966, Length=572, Percent_Identity=23.7762237762238, Blast_Score=96, Evalue=8e-21,
Organism=Escherichia coli, GI1787052, Length=514, Percent_Identity=23.3463035019455, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI1787551, Length=556, Percent_Identity=21.5827338129496, Blast_Score=80, Evalue=3e-16,

Paralogues:

None

Copy number: 760 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2360 Molecules/Cell In: Stationary-Phase,

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 61277; Mature: 61277

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: PS01040 SBP_BACTERIAL_5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHKLLFSAIALALSYSAQAVIVPEGTQLDEKQHIVFNNGAEPQSFDPHKTEGVPESNVA
CCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHH
YQLLEGLVTSDSEGKLQPGVAESWENTPDFKTWTFHLRKDAKWSNGDPVTAHDFVFAWRR
HHHHHHHHCCCCCCCCCCCCHHCCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHH
LVDPATAAPYASYLSYLQVENAQDIIDGKKKPAELGVEAKDDYTFVVHATNPVPYAVSLT
HCCCCCCCCHHHHHHHHHHCCCHHHHCCCCCHHHCCCCCCCCEEEEEECCCCCCEEEEEC
THQSLLPLPQKVVEKLGDAWVKKENYVGNGAYKLANHIINEKIEFERNPLYWNDKETVIN
CCCHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEECCCCCEECCCHHEEC
SATFLAIENPSTDVARYRAGDLDMTSYGLPPEQFAKLQKELPGEVYVTRTLGTYSYELNN
CEEEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECEEEEEECC
KKAPFDNVNIRKALNLSLDRHVITDKVLGQGQTPTYVFTPTYIEEGHLIQQPAYSKEPMA
CCCCCCCCCHHHEECCCCCHHHHHHHHHCCCCCCEEEECCCEECCCCEECCCCCCCCCHH
QRNEEAIKLLEEAGYSKANPLKFSILYNTNENHKKVAIAAASMWKANTKGLIDVKLENQE
HCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCEEEEEEEHHHCCCCCCEEEEEECCCH
WKTYIDSRRAGRYDAARAGWSADYNQATTFGNYFLSNSSNNTAKYANPEYDKAMAESYAA
HHHHHHHHCCCCCHHHHCCCCCCCCCHHHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHC
TDAEGRAEGRAKAYAKAEEILAKDYGIVPIFNYVNPRLVKPYVKGYSGKDPQDHIYLRNL
CCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCEECHHHCCCCCCCCCCEEEEEEE
YIIKH
EEEEC
>Mature Secondary Structure
MQHKLLFSAIALALSYSAQAVIVPEGTQLDEKQHIVFNNGAEPQSFDPHKTEGVPESNVA
CCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHH
YQLLEGLVTSDSEGKLQPGVAESWENTPDFKTWTFHLRKDAKWSNGDPVTAHDFVFAWRR
HHHHHHHHCCCCCCCCCCCCHHCCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHH
LVDPATAAPYASYLSYLQVENAQDIIDGKKKPAELGVEAKDDYTFVVHATNPVPYAVSLT
HCCCCCCCCHHHHHHHHHHCCCHHHHCCCCCHHHCCCCCCCCEEEEEECCCCCCEEEEEC
THQSLLPLPQKVVEKLGDAWVKKENYVGNGAYKLANHIINEKIEFERNPLYWNDKETVIN
CCCHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEECCCCCEECCCHHEEC
SATFLAIENPSTDVARYRAGDLDMTSYGLPPEQFAKLQKELPGEVYVTRTLGTYSYELNN
CEEEEEECCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECEEEEEECC
KKAPFDNVNIRKALNLSLDRHVITDKVLGQGQTPTYVFTPTYIEEGHLIQQPAYSKEPMA
CCCCCCCCCHHHEECCCCCHHHHHHHHHCCCCCCEEEECCCEECCCCEECCCCCCCCCHH
QRNEEAIKLLEEAGYSKANPLKFSILYNTNENHKKVAIAAASMWKANTKGLIDVKLENQE
HCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCEEEEEEEHHHCCCCCCEEEEEECCCH
WKTYIDSRRAGRYDAARAGWSADYNQATTFGNYFLSNSSNNTAKYANPEYDKAMAESYAA
HHHHHHHHCCCCCHHHHCCCCCCCCCHHHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHC
TDAEGRAEGRAKAYAKAEEILAKDYGIVPIFNYVNPRLVKPYVKGYSGKDPQDHIYLRNL
CCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCEECHHHCCCCCCCCCCEEEEEEE
YIIKH
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]