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The map label for this gene is yjjV [C]

Identifier: 148825795

GI number: 148825795

Start: 766158

End: 766829

Strand: Direct

Name: yjjV [C]

Synonym: CGSHiEE_03730

Alternate gene names: 148825795

Gene position: 766158-766829 (Clockwise)

Preceding gene: 148825794

Following gene: 148825796

Centisome position: 42.26

GC content: 35.42

Gene sequence:

>672_bases
ATGCTTGCGGTGAGTACTAATCTCAACAGTGCTAAAAAACTGCTGAATTTAAAACAGAATTCCCCAAAGAAACTTTATAT
TGCAGCTGGTTTTCATCCTGAACAGCAATTACCTAGTTTAGAAGAACAAAAAGAATTATTTCAATGGATTGATGAACATC
ATTCATCGATTTCTGGGATTGGCGAGGTGGGGTTGCCACATTATTCTAAACGAGAAAATCCGAATTTAGATTACGTGCCT
TACATTGAATTACTTGAACGCTTTATTCTGATAGCAAAAAAATGGGATTTACCGTTAAATTTGCATATTGTACATAACGA
TGTAGAAATTGCCCTTGAATTATTGCAGAAACACAAAATTCAACGGGCTCATTTTCACTGGTTTAAGACAGATGAAAAAT
CTTTTCAGAAATTTTTCTCTACACCTTATTTTGCAAGCCTAACCCCTGATATTTTATGGAACCCTAAAACCCAATATGTC
GCACAACATTTACCCTTAAATCGCTTGATGATTGAAACGGATAGCCCTTGGCAACACGAGGGATTTGAACGTGCGGGCAT
TTCTGAACAATTATTGGCAGTCTTGCAAAAACTAGCTGAATTAAAGTCTTTGCCATTACATTCTGTTCAAAAGCAAATGC
TTTTGAATACTCAACAGTTTTATCGATTATAA

Upstream 100 bases:

>100_bases
TTTCATTGGAAAAGAAATGTTATTTGACAGCCATCTTCATTTAGACCAACTCTCTGACGAGAATATTCAGCAAACACTTG
CTCATTCAAAGATTATAGGT

Downstream 100 bases:

>100_bases
GGATTAAAAATGAATATCGAAATTATCCCCGTTACCGCATTCCAACAAAATTGTTCTTTGATTTGGGATGATGAAAAAAA
TGCCGCAATTATTGACCCAG

Product: putative deoxyribonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MLAVSTNLNSAKKLLNLKQNSPKKLYIAAGFHPEQQLPSLEEQKELFQWIDEHHSSISGIGEVGLPHYSKRENPNLDYVP
YIELLERFILIAKKWDLPLNLHIVHNDVEIALELLQKHKIQRAHFHWFKTDEKSFQKFFSTPYFASLTPDILWNPKTQYV
AQHLPLNRLMIETDSPWQHEGFERAGISEQLLAVLQKLAELKSLPLHSVQKQMLLNTQQFYRL

Sequences:

>Translated_223_residues
MLAVSTNLNSAKKLLNLKQNSPKKLYIAAGFHPEQQLPSLEEQKELFQWIDEHHSSISGIGEVGLPHYSKRENPNLDYVP
YIELLERFILIAKKWDLPLNLHIVHNDVEIALELLQKHKIQRAHFHWFKTDEKSFQKFFSTPYFASLTPDILWNPKTQYV
AQHLPLNRLMIETDSPWQHEGFERAGISEQLLAVLQKLAELKSLPLHSVQKQMLLNTQQFYRL
>Mature_223_residues
MLAVSTNLNSAKKLLNLKQNSPKKLYIAAGFHPEQQLPSLEEQKELFQWIDEHHSSISGIGEVGLPHYSKRENPNLDYVP
YIELLERFILIAKKWDLPLNLHIVHNDVEIALELLQKHKIQRAHFHWFKTDEKSFQKFFSTPYFASLTPDILWNPKTQYV
AQHLPLNRLMIETDSPWQHEGFERAGISEQLLAVLQKLAELKSLPLHSVQKQMLLNTQQFYRL

Specific function: Unknown

COG id: COG0084

COG function: function code L; Mg-dependent DNase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tatD DNase family [H]

Homologues:

Organism=Escherichia coli, GI87082439, Length=232, Percent_Identity=26.2931034482759, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015992
- InterPro:   IPR001130
- InterPro:   IPR018228
- InterPro:   IPR012278 [H]

Pfam domain/function: PF01026 TatD_DNase [H]

EC number: 3.1.21.-

Molecular weight: Translated: 26124; Mature: 26124

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: PS01091 TATD_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAVSTNLNSAKKLLNLKQNSPKKLYIAAGFHPEQQLPSLEEQKELFQWIDEHHSSISGI
CEEEECCHHHHHHHHHHCCCCCCEEEEEECCCCHHHCCCHHHHHHHHHHHHHHHHHHHCC
GEVGLPHYSKRENPNLDYVPYIELLERFILIAKKWDLPLNLHIVHNDVEIALELLQKHKI
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHH
QRAHFHWFKTDEKSFQKFFSTPYFASLTPDILWNPKTQYVAQHLPLNRLMIETDSPWQHE
HHHHHHEECCCHHHHHHHHCCCCCCCCCCCCEECCHHHHHHHHCCCCCEEEECCCCCCCC
GFERAGISEQLLAVLQKLAELKSLPLHSVQKQMLLNTQQFYRL
CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLAVSTNLNSAKKLLNLKQNSPKKLYIAAGFHPEQQLPSLEEQKELFQWIDEHHSSISGI
CEEEECCHHHHHHHHHHCCCCCCEEEEEECCCCHHHCCCHHHHHHHHHHHHHHHHHHHCC
GEVGLPHYSKRENPNLDYVPYIELLERFILIAKKWDLPLNLHIVHNDVEIALELLQKHKI
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHH
QRAHFHWFKTDEKSFQKFFSTPYFASLTPDILWNPKTQYVAQHLPLNRLMIETDSPWQHE
HHHHHHEECCCHHHHHHHHCCCCCCCCCCCCEECCHHHHHHHHCCCCCEEEECCCCCCCC
GFERAGISEQLLAVLQKLAELKSLPLHSVQKQMLLNTQQFYRL
CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]