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The map label for this gene is yidA [C]

Identifier: 148825716

GI number: 148825716

Start: 663433

End: 664218

Strand: Direct

Name: yidA [C]

Synonym: CGSHiEE_03305

Alternate gene names: 148825716

Gene position: 663433-664218 (Clockwise)

Preceding gene: 148825715

Following gene: 148825719

Centisome position: 36.59

GC content: 37.15

Gene sequence:

>786_bases
ATGTATAAAGCAGTATTTAGTGATTTTGATGGCACCTTATTAACCTCTCAACATACCATTTCCCCTCGAACTGTTGCGGT
AATTAAGCGTTTAACGGCGAATGGCATTCCTTTTGTGCCAATTTCGGCGCGTTCTCCTCTAGGTATTTTGCCTTATTGGA
AACAGCTTGAAACGAATAATGTGCTTGTTGCATTTAGTGGCGCGCTTATTTTGAACCAAAATCTCGAACCAATTTATAGC
GTACAAATTGAGCCAAAAGATATTTTAGAGATTAATACCGTTTTGGCGGATCATCCGTTGCTTGGCGTGAATTATTATAC
AAATAATGATTGCCATGCTCGTGACGTAGAAAATAAATGGGTGATTTATGAACGCAGAGTGACCAAAATTGAGATTCATC
CTTTTGATGAAGTAGCGACAAGTTCGCCACATAAAATTCAAATTATTGGGGAAGCAGAAGAAATCATTGAGATTGAAGTT
CTTTTAAAGAAAAAATTTCCACATTTAAGTATTTGTCGTTCCCACGCTAATTTTTTAGAGGTAATGCACAAGAGTGCAAC
CAAAGGAAGTGCGGTGCGTTTTTTGGAAGATTATTTTGGCGTACAAACTAATGAAGTGATTGCATTTGGCGATAATTTTA
ATGATCTGGATATGCTAGAACATGTGGGGCTTGGTGTTGCAATGGGAAATGCGCCAAATGAAATTAAACAAGCTGCAAAT
GTGGTTACGGCAACCAATAATGAAGATGGACTTGCATTGATTTTAGAAGAAAAATTTCCTGAATAA

Upstream 100 bases:

>100_bases
TGAAGCGGAAGAAATGGAAAGCTTAGAAACCCAAATTATGCAAGGATTAGGCTTTGATGATCCTTATCTAGCAGAGAAAT
AATCTTTATTCGGAGTAATG

Downstream 100 bases:

>100_bases
TTAGAAAAGAAAGGCTCTCAATTGAGAGCCTTTTAGCTATGCTTCTTGTGAATGATACATTGCTTCAATTTGCTTGCGAT
AACGTTCTAAAATCACTTTT

Product: haloacid dehalogenase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MYKAVFSDFDGTLLTSQHTISPRTVAVIKRLTANGIPFVPISARSPLGILPYWKQLETNNVLVAFSGALILNQNLEPIYS
VQIEPKDILEINTVLADHPLLGVNYYTNNDCHARDVENKWVIYERRVTKIEIHPFDEVATSSPHKIQIIGEAEEIIEIEV
LLKKKFPHLSICRSHANFLEVMHKSATKGSAVRFLEDYFGVQTNEVIAFGDNFNDLDMLEHVGLGVAMGNAPNEIKQAAN
VVTATNNEDGLALILEEKFPE

Sequences:

>Translated_261_residues
MYKAVFSDFDGTLLTSQHTISPRTVAVIKRLTANGIPFVPISARSPLGILPYWKQLETNNVLVAFSGALILNQNLEPIYS
VQIEPKDILEINTVLADHPLLGVNYYTNNDCHARDVENKWVIYERRVTKIEIHPFDEVATSSPHKIQIIGEAEEIIEIEV
LLKKKFPHLSICRSHANFLEVMHKSATKGSAVRFLEDYFGVQTNEVIAFGDNFNDLDMLEHVGLGVAMGNAPNEIKQAAN
VVTATNNEDGLALILEEKFPE
>Mature_261_residues
MYKAVFSDFDGTLLTSQHTISPRTVAVIKRLTANGIPFVPISARSPLGILPYWKQLETNNVLVAFSGALILNQNLEPIYS
VQIEPKDILEINTVLADHPLLGVNYYTNNDCHARDVENKWVIYERRVTKIEIHPFDEVATSSPHKIQIIGEAEEIIEIEV
LLKKKFPHLSICRSHANFLEVMHKSATKGSAVRFLEDYFGVQTNEVIAFGDNFNDLDMLEHVGLGVAMGNAPNEIKQAAN
VVTATNNEDGLALILEEKFPE

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=272, Percent_Identity=30.1470588235294, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI48994981, Length=239, Percent_Identity=25.9414225941423, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1786982, Length=262, Percent_Identity=24.8091603053435, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI87081741, Length=251, Percent_Identity=23.9043824701195, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 29181; Mature: 29181

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: PS01228 COF_1 ; PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKAVFSDFDGTLLTSQHTISPRTVAVIKRLTANGIPFVPISARSPLGILPYWKQLETNN
CCCCEECCCCCEEEECCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHCCCCC
VLVAFSGALILNQNLEPIYSVQIEPKDILEINTVLADHPLLGVNYYTNNDCHARDVENKW
EEEEEECEEEECCCCCCEEEEEECCHHHHEEHHHHCCCCEEEEEEEECCCCCCCCCCCCE
VIYERRVTKIEIHPFDEVATSSPHKIQIIGEAEEIIEIEVLLKKKFPHLSICRSHANFLE
EEEEEEEEEEEECCCHHHHCCCCCEEEEEECHHHHEEEEEEECCCCCHHHHHHHHHHHHH
VMHKSATKGSAVRFLEDYFGVQTNEVIAFGDNFNDLDMLEHVGLGVAMGNAPNEIKQAAN
HHHHCCCCCHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHCCCEEEECCCHHHHHHHHC
VVTATNNEDGLALILEEKFPE
EEEECCCCCCEEEEEECCCCC
>Mature Secondary Structure
MYKAVFSDFDGTLLTSQHTISPRTVAVIKRLTANGIPFVPISARSPLGILPYWKQLETNN
CCCCEECCCCCEEEECCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHCCCCC
VLVAFSGALILNQNLEPIYSVQIEPKDILEINTVLADHPLLGVNYYTNNDCHARDVENKW
EEEEEECEEEECCCCCCEEEEEECCHHHHEEHHHHCCCCEEEEEEEECCCCCCCCCCCCE
VIYERRVTKIEIHPFDEVATSSPHKIQIIGEAEEIIEIEVLLKKKFPHLSICRSHANFLE
EEEEEEEEEEEECCCHHHHCCCCCEEEEEECHHHHEEEEEEECCCCCHHHHHHHHHHHHH
VMHKSATKGSAVRFLEDYFGVQTNEVIAFGDNFNDLDMLEHVGLGVAMGNAPNEIKQAAN
HHHHCCCCCHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHCCCEEEECCCHHHHHHHHC
VVTATNNEDGLALILEEKFPE
EEEECCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]