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The map label for this gene is recN [H]

Identifier: 148825650

GI number: 148825650

Start: 589458

End: 591134

Strand: Direct

Name: recN [H]

Synonym: CGSHiEE_02940

Alternate gene names: 148825650

Gene position: 589458-591134 (Clockwise)

Preceding gene: 148825649

Following gene: 148825659

Centisome position: 32.51

GC content: 37.21

Gene sequence:

>1677_bases
ATGCTTACTCAACTTACTATCAATAATTTTGCGATTGTTCGTCAGCTTGATATTGAATTGGCGAAAGGAATGTCTGTTAT
AACAGGGGAAACTGGTGCTGGAAAATCTATCGCCATTGATGCTTTAGGTTTATGTTTCGGACAAAGAGTAGAAACCTCAA
TGGTGCGTGAAGGGCAAGAGCGTGCGGAAATTTGTGCAATTTTCCAACTAGAATCGCAAAATCCTGCTTATCACTGGTTG
AGTGAGCAAGAATTACAGGATCCAGATAATCCAACTGAATGTATTTTACGTCGCATAATTAATGCAGACGGACGTTCTAA
GGCTTTTATTAATAGTACACCAGTATCCGCTTCTCAATTAAAAGAAATTGCTCAATATCTTGTTCATATTAATGGGCAAC
ACGCTTCTCAATTATTGTTAAAAAATGACTATCAGCTTCAGTTAGTTGATAATTTTGCCGCTCATCCTGAATTACTTGTG
AAAATGCGTGAAGATTATCAGACATGGAAAAATCTTCAAAATCAAGTTAAAACCTTTCAACAAAAAGTGGCGGAAAATGA
AGCACGTAAACAACTTTTACAGTATCAAGTGGATGAACTAGATGAATTTAACCTTCGACCAAATGAATATTTGGAATTAG
AAGATGAACAACGTCGTTTATCTAGCAGCGAACAGCTAACCCAACTTTCCCAATCTGCACTGCAAATTTTAAGTGAAAAT
GACACCGTAAATATCGATAGTTTGCTTTATCGTGCGACACAATATATTGATGAATTAGCTGAACTTGATCCGCAATATGC
TGAAGTGCAAAATATGTTGAATGATGCGTTGATTCAAGTGCAAGAAGCAACCAGTGAAGTGCAAAATTTATCAAGTAATA
TCGAGCAAGATCCTCAGCTTTTACAGGAAATCGAACAAAGAATTAGTCAGACTTTACAACTTGCTCGTAAACATCAAGTT
AAACCTGAAGATCTTGTAGAACAGCACAAAAAATTAAAAGCAGAATTAACCGCACTTTTGGATTTTTCTGAAAGTGAAGA
GATGTTGATTGAGCAAGAAAAACTCGCATTTGAACAAATGCAAGCAACGGCTACAGCATTAACAGCAAGTCGTCAGAAAT
CAGCAAATCGCTTAGCGCAAAATGTCACACAGTCGATAAAACAACTTGCAATGGAAAACGCTGAATTTTATGTAGAGTTG
AATACGGATTTAGATAAAGTGAGTGCAAATGGTGCGGATAATGTGATTTTCACTTTGCGTAGTAATTTAGGACAACAACC
GCAGCCATTAACTAAAATTGCCTCTGGTGGTGAGCTTTCTCGTATTTCTTTAGCGATTCAAGTTTTAACTTCTGATCAAT
CGGCTATTCCAACCTTAATTTTCGATGAAGTGGACGTGGGCATTAGCGGAAAAACAGCAAGTGTTGTCGGAAAACTTTTA
CGTCAATTAAGTGAACGCTGCCAAGTATTATGCGTCACTCACTTGCCACAGGTTGCTTGTCATGGTCATCATCAGTTTAA
TGTAGAAAAATTTACTGTGGATAATAAAACTGAAACAAAAATGACCGCACTTTCACAATCTGAACGTGTACCAGCCTTGG
CAAGACTCTTGGGCGGAAGTGAAATTACAGAATTAGCCTTAGCCAATGCACAGGAAATGTTAGATTTAGTTCATTAA

Upstream 100 bases:

>100_bases
ATTTTCGATTGAAATAGATTTGACAAAATACTGTAAAAAATCCTTTACTGTAAATTAAATCAGTTATATCATATTAAATA
TACAGTTAAAGGATTTTGCT

Downstream 100 bases:

>100_bases
AATGGGATTTAATTACTATTTTACGAACTAAATAGCTTATCCCAAAATGCTTGAATAAATGACCGCTCTTTAACAAATTT
ACTGTTTTCCACAACGGAAG

Product: DNA repair protein

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 558; Mature: 558

Protein sequence:

>558_residues
MLTQLTINNFAIVRQLDIELAKGMSVITGETGAGKSIAIDALGLCFGQRVETSMVREGQERAEICAIFQLESQNPAYHWL
SEQELQDPDNPTECILRRIINADGRSKAFINSTPVSASQLKEIAQYLVHINGQHASQLLLKNDYQLQLVDNFAAHPELLV
KMREDYQTWKNLQNQVKTFQQKVAENEARKQLLQYQVDELDEFNLRPNEYLELEDEQRRLSSSEQLTQLSQSALQILSEN
DTVNIDSLLYRATQYIDELAELDPQYAEVQNMLNDALIQVQEATSEVQNLSSNIEQDPQLLQEIEQRISQTLQLARKHQV
KPEDLVEQHKKLKAELTALLDFSESEEMLIEQEKLAFEQMQATATALTASRQKSANRLAQNVTQSIKQLAMENAEFYVEL
NTDLDKVSANGADNVIFTLRSNLGQQPQPLTKIASGGELSRISLAIQVLTSDQSAIPTLIFDEVDVGISGKTASVVGKLL
RQLSERCQVLCVTHLPQVACHGHHQFNVEKFTVDNKTETKMTALSQSERVPALARLLGGSEITELALANAQEMLDLVH

Sequences:

>Translated_558_residues
MLTQLTINNFAIVRQLDIELAKGMSVITGETGAGKSIAIDALGLCFGQRVETSMVREGQERAEICAIFQLESQNPAYHWL
SEQELQDPDNPTECILRRIINADGRSKAFINSTPVSASQLKEIAQYLVHINGQHASQLLLKNDYQLQLVDNFAAHPELLV
KMREDYQTWKNLQNQVKTFQQKVAENEARKQLLQYQVDELDEFNLRPNEYLELEDEQRRLSSSEQLTQLSQSALQILSEN
DTVNIDSLLYRATQYIDELAELDPQYAEVQNMLNDALIQVQEATSEVQNLSSNIEQDPQLLQEIEQRISQTLQLARKHQV
KPEDLVEQHKKLKAELTALLDFSESEEMLIEQEKLAFEQMQATATALTASRQKSANRLAQNVTQSIKQLAMENAEFYVEL
NTDLDKVSANGADNVIFTLRSNLGQQPQPLTKIASGGELSRISLAIQVLTSDQSAIPTLIFDEVDVGISGKTASVVGKLL
RQLSERCQVLCVTHLPQVACHGHHQFNVEKFTVDNKTETKMTALSQSERVPALARLLGGSEITELALANAQEMLDLVH
>Mature_558_residues
MLTQLTINNFAIVRQLDIELAKGMSVITGETGAGKSIAIDALGLCFGQRVETSMVREGQERAEICAIFQLESQNPAYHWL
SEQELQDPDNPTECILRRIINADGRSKAFINSTPVSASQLKEIAQYLVHINGQHASQLLLKNDYQLQLVDNFAAHPELLV
KMREDYQTWKNLQNQVKTFQQKVAENEARKQLLQYQVDELDEFNLRPNEYLELEDEQRRLSSSEQLTQLSQSALQILSEN
DTVNIDSLLYRATQYIDELAELDPQYAEVQNMLNDALIQVQEATSEVQNLSSNIEQDPQLLQEIEQRISQTLQLARKHQV
KPEDLVEQHKKLKAELTALLDFSESEEMLIEQEKLAFEQMQATATALTASRQKSANRLAQNVTQSIKQLAMENAEFYVEL
NTDLDKVSANGADNVIFTLRSNLGQQPQPLTKIASGGELSRISLAIQVLTSDQSAIPTLIFDEVDVGISGKTASVVGKLL
RQLSERCQVLCVTHLPQVACHGHHQFNVEKFTVDNKTETKMTALSQSERVPALARLLGGSEITELALANAQEMLDLVH

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=554, Percent_Identity=48.7364620938628, Blast_Score=506, Evalue=1e-144,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 62663; Mature: 62663

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTQLTINNFAIVRQLDIELAKGMSVITGETGAGKSIAIDALGLCFGQRVETSMVREGQE
CCCEEEECCCHHHHHHHHHHHCCCEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHCCHH
RAEICAIFQLESQNPAYHWLSEQELQDPDNPTECILRRIINADGRSKAFINSTPVSASQL
HHHEEEEEEECCCCCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCHHHH
KEIAQYLVHINGQHASQLLLKNDYQLQLVDNFAAHPELLVKMREDYQTWKNLQNQVKTFQ
HHHHHHHHHCCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QKVAENEARKQLLQYQVDELDEFNLRPNEYLELEDEQRRLSSSEQLTQLSQSALQILSEN
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCC
DTVNIDSLLYRATQYIDELAELDPQYAEVQNMLNDALIQVQEATSEVQNLSSNIEQDPQL
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LQEIEQRISQTLQLARKHQVKPEDLVEQHKKLKAELTALLDFSESEEMLIEQEKLAFEQM
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
QATATALTASRQKSANRLAQNVTQSIKQLAMENAEFYVELNTDLDKVSANGADNVIFTLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCCCCCEEEEEH
SNLGQQPQPLTKIASGGELSRISLAIQVLTSDQSAIPTLIFDEVDVGISGKTASVVGKLL
HHCCCCCCCHHHHCCCCCHHHHEEEEEEEECCCCCCCHHEECCCCCCCCCCHHHHHHHHH
RQLSERCQVLCVTHLPQVACHGHHQFNVEKFTVDNKTETKMTALSQSERVPALARLLGGS
HHHHHHHHHHHHHHCCHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHHCCC
EITELALANAQEMLDLVH
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLTQLTINNFAIVRQLDIELAKGMSVITGETGAGKSIAIDALGLCFGQRVETSMVREGQE
CCCEEEECCCHHHHHHHHHHHCCCEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHCCHH
RAEICAIFQLESQNPAYHWLSEQELQDPDNPTECILRRIINADGRSKAFINSTPVSASQL
HHHEEEEEEECCCCCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCHHHH
KEIAQYLVHINGQHASQLLLKNDYQLQLVDNFAAHPELLVKMREDYQTWKNLQNQVKTFQ
HHHHHHHHHCCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QKVAENEARKQLLQYQVDELDEFNLRPNEYLELEDEQRRLSSSEQLTQLSQSALQILSEN
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCC
DTVNIDSLLYRATQYIDELAELDPQYAEVQNMLNDALIQVQEATSEVQNLSSNIEQDPQL
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LQEIEQRISQTLQLARKHQVKPEDLVEQHKKLKAELTALLDFSESEEMLIEQEKLAFEQM
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
QATATALTASRQKSANRLAQNVTQSIKQLAMENAEFYVELNTDLDKVSANGADNVIFTLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCCCCCEEEEEH
SNLGQQPQPLTKIASGGELSRISLAIQVLTSDQSAIPTLIFDEVDVGISGKTASVVGKLL
HHCCCCCCCHHHHCCCCCHHHHEEEEEEEECCCCCCCHHEECCCCCCCCCCHHHHHHHHH
RQLSERCQVLCVTHLPQVACHGHHQFNVEKFTVDNKTETKMTALSQSERVPALARLLGGS
HHHHHHHHHHHHHHCCHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHHCCC
EITELALANAQEMLDLVH
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]