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The map label for this gene is secF [H]

Identifier: 148825478

GI number: 148825478

Start: 355849

End: 356823

Strand: Direct

Name: secF [H]

Synonym: CGSHiEE_01885

Alternate gene names: 148825478

Gene position: 355849-356823 (Clockwise)

Preceding gene: 148825477

Following gene: 148825480

Centisome position: 19.63

GC content: 37.44

Gene sequence:

>975_bases
ATGAAACTTTTTACAAAAGATAAAGGCGGACATTTTATCCGTGAAATCAATGGGATCAAGCTCCCGTTCCCATTGACTGA
ATTTATGAAAGTGCGTAAATTGGGTTATATATTATCCGCACTTTTAATGGTAATTTCTCTATTTTTTATTATTACCAAAG
GATTTAACTGGGGCTTAGATTTTACTGGTGGAGTGGTATTTGATACTCACTTCTCGCAATCCGCTAATCTTGAACAAATC
CGTAATAAACTTCACGAAAATGGAATTGAAAGCCCAGTTGTTCAAACCACAGGATCGGTTCAAGATGTAATGATTCGTTT
ACCTGCAAGTAATAATGATTCTACCATTGGTGAACACGTCAAAAGTATGCTACAGAATGTAGATAAAGACATTCAAATTC
GCAGTATTGAGTTCGTTGGCCCAAATGTTGGTGAAGAATTAGCACAAGGTGCGGTATATGCGACTTTAGCGACATTAGCA
ATGGTGCTTATTTATGTGGGGTCACGTTTTGAATGGCGTTTAGGCTTTGGCAGTATCGCTTCTCTTGCGCACGACGTCAT
TATTACGCTAGGGGTATTCTCTGCATTACAAATTGAAATTGATCTTACTTTTGTCGCAGCGATTTTATCTGTGGTGGGTT
ACTCCATCAACGATAGTATTGTGGTATTTGACCGGGTTCGTGAAAATTTCCGAAAAATTAGACGATTGGATACGATTGAT
ATTATTGATATTTCTTTAACGCAAACTTTATCAAGAACTATCATTACTTCGGTTACTACATTAGTTGTCGTGATGGCATT
GTTCTTCTTTGGTGGTCCTTCCATTCATAACTTTTCACTCGCTTTACTCGTAGGTATTGGATTTGGTACTTATTCCTCGA
TTTTTGTTGCCATCGCCATTGCATACGATGTTGGTTTACGTCGTGAACATATGATCCCACCTAAAGTAGATAAAGAAATT
GATGAATTACCTTAG

Upstream 100 bases:

>100_bases
GCGATTTCTATGTTTACCGCGATTACAGGTACTCGCGCATTAGTTAATGCCCTTTACGGCGGTAAACAACTTAAAAAATT
ATTAATTTAGGTGGGAAATG

Downstream 100 bases:

>100_bases
TTGATTTACTTTTAGAATAAATTAAAAAAATAAGTTAATACGAAAATTTAACGTTTAACTATTTTTATTTATATAAATCT
CTAATTAAATAAAGTACTTA

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MKLFTKDKGGHFIREINGIKLPFPLTEFMKVRKLGYILSALLMVISLFFIITKGFNWGLDFTGGVVFDTHFSQSANLEQI
RNKLHENGIESPVVQTTGSVQDVMIRLPASNNDSTIGEHVKSMLQNVDKDIQIRSIEFVGPNVGEELAQGAVYATLATLA
MVLIYVGSRFEWRLGFGSIASLAHDVIITLGVFSALQIEIDLTFVAAILSVVGYSINDSIVVFDRVRENFRKIRRLDTID
IIDISLTQTLSRTIITSVTTLVVVMALFFFGGPSIHNFSLALLVGIGFGTYSSIFVAIAIAYDVGLRREHMIPPKVDKEI
DELP

Sequences:

>Translated_324_residues
MKLFTKDKGGHFIREINGIKLPFPLTEFMKVRKLGYILSALLMVISLFFIITKGFNWGLDFTGGVVFDTHFSQSANLEQI
RNKLHENGIESPVVQTTGSVQDVMIRLPASNNDSTIGEHVKSMLQNVDKDIQIRSIEFVGPNVGEELAQGAVYATLATLA
MVLIYVGSRFEWRLGFGSIASLAHDVIITLGVFSALQIEIDLTFVAAILSVVGYSINDSIVVFDRVRENFRKIRRLDTID
IIDISLTQTLSRTIITSVTTLVVVMALFFFGGPSIHNFSLALLVGIGFGTYSSIFVAIAIAYDVGLRREHMIPPKVDKEI
DELP
>Mature_324_residues
MKLFTKDKGGHFIREINGIKLPFPLTEFMKVRKLGYILSALLMVISLFFIITKGFNWGLDFTGGVVFDTHFSQSANLEQI
RNKLHENGIESPVVQTTGSVQDVMIRLPASNNDSTIGEHVKSMLQNVDKDIQIRSIEFVGPNVGEELAQGAVYATLATLA
MVLIYVGSRFEWRLGFGSIASLAHDVIITLGVFSALQIEIDLTFVAAILSVVGYSINDSIVVFDRVRENFRKIRRLDTID
IIDISLTQTLSRTIITSVTTLVVVMALFFFGGPSIHNFSLALLVGIGFGTYSSIFVAIAIAYDVGLRREHMIPPKVDKEI
DELP

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=302, Percent_Identity=47.682119205298, Blast_Score=298, Evalue=4e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 35875; Mature: 35875

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLFTKDKGGHFIREINGIKLPFPLTEFMKVRKLGYILSALLMVISLFFIITKGFNWGLD
CCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
FTGGVVFDTHFSQSANLEQIRNKLHENGIESPVVQTTGSVQDVMIRLPASNNDSTIGEHV
CCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCHHHEEEECCCCCCCCHHHHHH
KSMLQNVDKDIQIRSIEFVGPNVGEELAQGAVYATLATLAMVLIYVGSRFEWRLGFGSIA
HHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHH
SLAHDVIITLGVFSALQIEIDLTFVAAILSVVGYSINDSIVVFDRVRENFRKIRRLDTID
HHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHCCCEE
IIDISLTQTLSRTIITSVTTLVVVMALFFFGGPSIHNFSLALLVGIGFGTYSSIFVAIAI
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHH
AYDVGLRREHMIPPKVDKEIDELP
HHHHCCCCCCCCCCCCCCHHHCCC
>Mature Secondary Structure
MKLFTKDKGGHFIREINGIKLPFPLTEFMKVRKLGYILSALLMVISLFFIITKGFNWGLD
CCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
FTGGVVFDTHFSQSANLEQIRNKLHENGIESPVVQTTGSVQDVMIRLPASNNDSTIGEHV
CCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCHHHEEEECCCCCCCCHHHHHH
KSMLQNVDKDIQIRSIEFVGPNVGEELAQGAVYATLATLAMVLIYVGSRFEWRLGFGSIA
HHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHH
SLAHDVIITLGVFSALQIEIDLTFVAAILSVVGYSINDSIVVFDRVRENFRKIRRLDTID
HHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHCCCEE
IIDISLTQTLSRTIITSVTTLVVVMALFFFGGPSIHNFSLALLVGIGFGTYSSIFVAIAI
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHH
AYDVGLRREHMIPPKVDKEIDELP
HHHHCCCCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]