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The map label for this gene is bcp [H]

Identifier: 148825470

GI number: 148825470

Start: 340314

End: 341105

Strand: Direct

Name: bcp [H]

Synonym: CGSHiEE_01810

Alternate gene names: 148825470

Gene position: 340314-341105 (Clockwise)

Preceding gene: 148825469

Following gene: 148825472

Centisome position: 18.77

GC content: 39.9

Gene sequence:

>792_bases
ATGCAGCAAACAAAACGTTCGCTATTGGGTTTGCTTATTTCTTTGATCGTACACGGTATTGTTATAGGATTTATCTTGTG
GAATTGGAATAAGCCAAGTGATAGCGCAAATAGTGCACAAGGCGATATATCTACAAGTATTTCTATGGAGCTTTTGCAGG
GTATGGTGTTGGAAGAACCTGCTCCAGAGCCTGAAAATGTACAAAAAGAGCCAGAGCCAGAGCCAGAGCCAGAACCAGAA
AAACAAGAAATTGTAGAAGATCCAACAATAAAACCTGAACCGAAAAAAATCAAAGAACCCGAAAAGGAAAAGCCAAAGCC
CAAAGAAAAACCGAAAGAAAAGCCGAAAAATAAACCTAAAAAAGAGGTTAAACCACAACAGAAACCAATCAATAAAGATC
TACCAAAAGGCGATAAAAATATTGATTCAAGTGCTAACGTAAATGATAAAGCAAGCACAACAAGTGCAGCTAATAGCAAT
GCACAGGTAGCAGGAAGTGGAACGGATACGAGTGAAATAGCTGCTTACCGTTCTGCAATTCGCCGTGAAATTGAAAGTCA
TAAACGTTATCCAACTCGAGCGAAGATAATGCGCAAACAAGGAAAAGTGAGTGTATCTTTTAATGTGGGAGCTGATGGTT
CGCTAAGTGGAGCTAGAGTTACAAAATCCTCAGGCGATGAAAGTTTAGATAAGGCGGCATTAGACGCTATTAACGTTTCT
CGTTCTGTGGGAGCAAGACCCGCAGGATTCCCTTCGAGTTTAAGTGTGCAAATTAGTTTTACTCTTCAATAA

Upstream 100 bases:

>100_bases
GGCAATTGTTTCTATGAAAGATAAGGGAAAAAGTGCGGGTAAAAATTCTCAAGAATCTACTCCCTCCCAATCTGTACCAA
CTACGCCGTAAGGAATAATT

Downstream 100 bases:

>100_bases
AATGTGATATGGAAGATAAGTAATAGCGATTAATCTTCCTCAAAAGTGAAGCTGTAAAATCAAGGACTAAGTCTATAATC
ATAGACTTAGTCCTTTTAAT

Product: TonB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MQQTKRSLLGLLISLIVHGIVIGFILWNWNKPSDSANSAQGDISTSISMELLQGMVLEEPAPEPENVQKEPEPEPEPEPE
KQEIVEDPTIKPEPKKIKEPEKEKPKPKEKPKEKPKNKPKKEVKPQQKPINKDLPKGDKNIDSSANVNDKASTTSAANSN
AQVAGSGTDTSEIAAYRSAIRREIESHKRYPTRAKIMRKQGKVSVSFNVGADGSLSGARVTKSSGDESLDKAALDAINVS
RSVGARPAGFPSSLSVQISFTLQ

Sequences:

>Translated_263_residues
MQQTKRSLLGLLISLIVHGIVIGFILWNWNKPSDSANSAQGDISTSISMELLQGMVLEEPAPEPENVQKEPEPEPEPEPE
KQEIVEDPTIKPEPKKIKEPEKEKPKPKEKPKEKPKNKPKKEVKPQQKPINKDLPKGDKNIDSSANVNDKASTTSAANSN
AQVAGSGTDTSEIAAYRSAIRREIESHKRYPTRAKIMRKQGKVSVSFNVGADGSLSGARVTKSSGDESLDKAALDAINVS
RSVGARPAGFPSSLSVQISFTLQ
>Mature_263_residues
MQQTKRSLLGLLISLIVHGIVIGFILWNWNKPSDSANSAQGDISTSISMELLQGMVLEEPAPEPENVQKEPEPEPEPEPE
KQEIVEDPTIKPEPKKIKEPEKEKPKPKEKPKEKPKNKPKKEVKPQQKPINKDLPKGDKNIDSSANVNDKASTTSAANSN
AQVAGSGTDTSEIAAYRSAIRREIESHKRYPTRAKIMRKQGKVSVSFNVGADGSLSGARVTKSSGDESLDKAALDAINVS
RSVGARPAGFPSSLSVQISFTLQ

Specific function: Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requirin

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003538
- InterPro:   IPR006260 [H]

Pfam domain/function: PF03544 TonB [H]

EC number: NA

Molecular weight: Translated: 28594; Mature: 28594

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQTKRSLLGLLISLIVHGIVIGFILWNWNKPSDSANSAQGDISTSISMELLQGMVLEEP
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
APEPENVQKEPEPEPEPEPEKQEIVEDPTIKPEPKKIKEPEKEKPKPKEKPKEKPKNKPK
CCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCHHCCCCCCH
KEVKPQQKPINKDLPKGDKNIDSSANVNDKASTTSAANSNAQVAGSGTDTSEIAAYRSAI
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHH
RREIESHKRYPTRAKIMRKQGKVSVSFNVGADGSLSGARVTKSSGDESLDKAALDAINVS
HHHHHHHCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCEEECCCCHHHHHHHHHHHHHHH
RSVGARPAGFPSSLSVQISFTLQ
HHCCCCCCCCCCCEEEEEEEEEC
>Mature Secondary Structure
MQQTKRSLLGLLISLIVHGIVIGFILWNWNKPSDSANSAQGDISTSISMELLQGMVLEEP
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
APEPENVQKEPEPEPEPEPEKQEIVEDPTIKPEPKKIKEPEKEKPKPKEKPKEKPKNKPK
CCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCHHCCCCCCH
KEVKPQQKPINKDLPKGDKNIDSSANVNDKASTTSAANSNAQVAGSGTDTSEIAAYRSAI
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHH
RREIESHKRYPTRAKIMRKQGKVSVSFNVGADGSLSGARVTKSSGDESLDKAALDAINVS
HHHHHHHCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCEEECCCCHHHHHHHHHHHHHHH
RSVGARPAGFPSSLSVQISFTLQ
HHCCCCCCCCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8188372; 7542800 [H]