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The map label for this gene is znuB [H]

Identifier: 148825312

GI number: 148825312

Start: 184391

End: 185176

Strand: Direct

Name: znuB [H]

Synonym: CGSHiEE_00960

Alternate gene names: 148825312

Gene position: 184391-185176 (Clockwise)

Preceding gene: 148825311

Following gene: 148825313

Centisome position: 10.17

GC content: 39.19

Gene sequence:

>786_bases
ATGTTTGAAATTTTATTTCCTGCCCTTTTAACAGGCATTGTGCTTTCACTTATTACCGCGCCACTTGGCGTATTTGTGGT
GTGGCGGAAAATGGCTTATTTTGGCGACACCCTTTCTCATTCTGCCTTGCTCGGCGTGGCATTAGGTATTTTCTTACAAG
TCAATCCTTACATTGCAATTGTGGTGCTTACCTTAATTCTTGCTATTGCAATGGTGTGGTTAGAAAGCAATACGCAATTT
TCTATTGATACCTTGCTCGGTATTATCGCCCATAGCTGTTTATCTCTCGGCGTTGTGACAGTAGGATTATTACGGAATGT
ACGGGTAGATTTAATGAATTATTTATTTGGGGATTTGCTCGCAATTAATTATACCGATTTAATTTATATTGGCATTGGCG
TGATAATTGTGCTTTCAACATTAATTTACTTTTGGCAATCCTTACTTTCCACCACCGTATCGCCAGAACTCGCGCAAGTT
GAAGGCATTAATATCAAAAAAATGCGTTTTATTTTAATGATATTAACCGCATTGACTATTGCCTTGAGTATGAAATTTGT
CGGTGCATTAATAATCACATCCTTATTAATAATCCCTGCGGCAACCGCTCGTCGCTTTGCGAGAACACCAGAATCTATGG
TGGGCTGGGCAATTGTAGTCAGTATGTTGTCAATTATAGCTGGGCTAATCTTATCAGCCTTTTATGATACCGCTGCTGGG
CCTTCCGTTGTGATTTGTTCAGCGTTTTTATTTGTCTTATCACTCTTCAAAAAAGAGCGATTATGA

Upstream 100 bases:

>100_bases
TCGGCTTTTATACTCATCATCATAATCATCACCACACTTTACACGGTGATGTGTGCAGTTGTAATTCATCAGCAGTGCAT
TGTCAAAATAAGGATAAATA

Downstream 100 bases:

>100_bases
GCTTGCCCAACCAGTGAAAACCATTTGCGCCCCAGTTTAATTCTTGATAAAGTGCGGTCAATTTTTACGGTCTTTTTAGG
ATAACAAAATGAACCAAGAA

Product: 23S rRNA pseudouridylate synthase C

Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MFEILFPALLTGIVLSLITAPLGVFVVWRKMAYFGDTLSHSALLGVALGIFLQVNPYIAIVVLTLILAIAMVWLESNTQF
SIDTLLGIIAHSCLSLGVVTVGLLRNVRVDLMNYLFGDLLAINYTDLIYIGIGVIIVLSTLIYFWQSLLSTTVSPELAQV
EGINIKKMRFILMILTALTIALSMKFVGALIITSLLIIPAATARRFARTPESMVGWAIVVSMLSIIAGLILSAFYDTAAG
PSVVICSAFLFVLSLFKKERL

Sequences:

>Translated_261_residues
MFEILFPALLTGIVLSLITAPLGVFVVWRKMAYFGDTLSHSALLGVALGIFLQVNPYIAIVVLTLILAIAMVWLESNTQF
SIDTLLGIIAHSCLSLGVVTVGLLRNVRVDLMNYLFGDLLAINYTDLIYIGIGVIIVLSTLIYFWQSLLSTTVSPELAQV
EGINIKKMRFILMILTALTIALSMKFVGALIITSLLIIPAATARRFARTPESMVGWAIVVSMLSIIAGLILSAFYDTAAG
PSVVICSAFLFVLSLFKKERL
>Mature_261_residues
MFEILFPALLTGIVLSLITAPLGVFVVWRKMAYFGDTLSHSALLGVALGIFLQVNPYIAIVVLTLILAIAMVWLESNTQF
SIDTLLGIIAHSCLSLGVVTVGLLRNVRVDLMNYLFGDLLAINYTDLIYIGIGVIIVLSTLIYFWQSLLSTTVSPELAQV
EGINIKKMRFILMILTALTIALSMKFVGALIITSLLIIPAATARRFARTPESMVGWAIVVSMLSIIAGLILSAFYDTAAG
PSVVICSAFLFVLSLFKKERL

Specific function: Involved in the high-affinity zinc uptake transport system [H]

COG id: COG1108

COG function: function code P; ABC-type Mn2+/Zn2+ transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-3 integral membrane protein family [H]

Homologues:

Organism=Escherichia coli, GI1788166, Length=259, Percent_Identity=61.003861003861, Blast_Score=329, Evalue=1e-91,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001626 [H]

Pfam domain/function: PF00950 ABC-3 [H]

EC number: NA

Molecular weight: Translated: 28406; Mature: 28406

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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CHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Zn (II) [Periplasm]; H2O; ATP [C]

Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]