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The map label for this gene is comB [H]

Identifier: 148825282

GI number: 148825282

Start: 154658

End: 155164

Strand: Direct

Name: comB [H]

Synonym: CGSHiEE_00800

Alternate gene names: 148825282

Gene position: 154658-155164 (Clockwise)

Preceding gene: 148825281

Following gene: 148825283

Centisome position: 8.53

GC content: 33.93

Gene sequence:

>507_bases
ATGTCGATGAATTTATTGCCTTGGCGTACTTATCAACATCAAAACCGTTTACGTCGTTTAGCTTTTTATATCGCTTTATT
TATCTTGCTTGCTATTAATTTAACTTTGGCTTTTAGTAATTTAATTGAACAACAGAAACAAAATTTGCAAGCGCAGCAAA
CATCTTTTGAGCAACTTAATCAGCAACTTTATAAAACAGCCAAGCAAATTGAACAGTTGCGTAGTGCAGTGCAGGTTGGC
GAAATTTTGACATCTATTCCTAACGAGCAAGTAAAAAAGAGTTTACAGCTGCTAAGTGAATTACCTTTTCAGCAAGGAGA
ACTGAATAAATTTAAACAAGATGCCAATAACTTAAGTTTGGAAGGTAACGCGCAAGATCAAACAGAATTTGAACTGATTC
ATCAATTTTTAAAGAAACATTTTCCCAATGTGAAATTAAGTCAGGTTCAACCTGAACAAGATACATTGTTTTTTCACTTT
GATGTGGAACAAGGGGCGGAAAAATGA

Upstream 100 bases:

>100_bases
ATCAGAAAACTGGCAGCGAGTAGAAACAGAACTCCCTTTTATTGCGCTGGGCAACGCGCTATGGAAAAAAGATTTATATC
AACAAAAAGTGAGTAGTTAA

Downstream 100 bases:

>100_bases
AAGCTTTTTTTAACGATCCTTTTACTCCTTTTGGAAAATGGCTAAGTCAGCCTTTTTATGTGCACGGTTTAACCTTTTTA
TTGCTATTAAGTGCGGTGAT

Product: competence protein B

Products: NA

Alternate protein names: DNA transformation protein ComB [H]

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MSMNLLPWRTYQHQNRLRRLAFYIALFILLAINLTLAFSNLIEQQKQNLQAQQTSFEQLNQQLYKTAKQIEQLRSAVQVG
EILTSIPNEQVKKSLQLLSELPFQQGELNKFKQDANNLSLEGNAQDQTEFELIHQFLKKHFPNVKLSQVQPEQDTLFFHF
DVEQGAEK

Sequences:

>Translated_168_residues
MSMNLLPWRTYQHQNRLRRLAFYIALFILLAINLTLAFSNLIEQQKQNLQAQQTSFEQLNQQLYKTAKQIEQLRSAVQVG
EILTSIPNEQVKKSLQLLSELPFQQGELNKFKQDANNLSLEGNAQDQTEFELIHQFLKKHFPNVKLSQVQPEQDTLFFHF
DVEQGAEK
>Mature_167_residues
SMNLLPWRTYQHQNRLRRLAFYIALFILLAINLTLAFSNLIEQQKQNLQAQQTSFEQLNQQLYKTAKQIEQLRSAVQVGE
ILTSIPNEQVKKSLQLLSELPFQQGELNKFKQDANNLSLEGNAQDQTEFELIHQFLKKHFPNVKLSQVQPEQDTLFFHFD
VEQGAEK

Specific function: Involved in transformation (competence for DNA uptake) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016778
- InterPro:   IPR007813 [H]

Pfam domain/function: PF05137 PilN [H]

EC number: NA

Molecular weight: Translated: 19660; Mature: 19529

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMNLLPWRTYQHQNRLRRLAFYIALFILLAINLTLAFSNLIEQQKQNLQAQQTSFEQLN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQLYKTAKQIEQLRSAVQVGEILTSIPNEQVKKSLQLLSELPFQQGELNKFKQDANNLSL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCC
EGNAQDQTEFELIHQFLKKHFPNVKLSQVQPEQDTLFFHFDVEQGAEK
CCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEEECCCCCCC
>Mature Secondary Structure 
SMNLLPWRTYQHQNRLRRLAFYIALFILLAINLTLAFSNLIEQQKQNLQAQQTSFEQLN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQLYKTAKQIEQLRSAVQVGEILTSIPNEQVKKSLQLLSELPFQQGELNKFKQDANNLSL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCC
EGNAQDQTEFELIHQFLKKHFPNVKLSQVQPEQDTLFFHFDVEQGAEK
CCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1916268; 7542800 [H]