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The map label for this gene is ygfZ [C]

Identifier: 148825254

GI number: 148825254

Start: 125229

End: 126071

Strand: Direct

Name: ygfZ [C]

Synonym: CGSHiEE_00660

Alternate gene names: 148825254

Gene position: 125229-126071 (Clockwise)

Preceding gene: 148825253

Following gene: 148825259

Centisome position: 6.91

GC content: 37.13

Gene sequence:

>843_bases
ATGTCTCAATTTATTTCTCTTACTCAATATCAGCTGATTGAAGTACAGGGTGCGGATGCAGAAAAATATTTGCAAGGGCA
ATTAACTTCTGATGTTGTGCGATTAGCAAGTGGCGCAACGACACTTACAGCTCACTGTGACCCAAAAGGTAAAATGAATG
CAATTTATCGTTTGTTTAAAGTAAGTAGTGAACAATTCTTTTTACTCGTTAAGAAAGATATTTTGCCAAGCGGTCTGGAT
GCTTTGAAAAAATATGCGGTATTTTCAAAAGTCAGTTTTGATTTACGTGATTGGCAAATCATTGGCGTAATAGGTGAAAA
ATGTGGAAAAATTACACCGCACTTTTCATTAGAAATTGATGAACAACGTTCAATTTTATTGAATGAAAGTGAATTGCCCG
TGAATTTTAATGGCGATGAAAAAATTTGGGAAGTAGCTGATATTCAAGCAGGATTGCCAAATTTAAGTCCGCAAACGCAA
AATGAATTTATCCCACAAGCGTTAAATTTACAGGCTATTGAGCAAGCTATTTCTTTTACCAAAGGTTGCTATATCGGACA
AGAAACTGTGGCTCGTGCGAAATATCGTGGTGCAAACAAACGCGCAATGTTTATTTTTAAAGCGCAAACCCAGCAGGAAG
CGGAAATTGGCAGTGAAATTGAAATGCAGCTTGAAGCCAATTGGCGTAAGACTGGCACGATTACAAGTGCGGTCAATTTA
GACGGTGTTTTATGGTTGCAAGTTGTGATGAATAACGACATTGATTCAGAGCAACAATTTAGATTGCCGAGTAATGAAAT
ACTGTTAGAGCGAGTGCAATTACCTTATTCGATTACTGAATAA

Upstream 100 bases:

>100_bases
TAAATCCATTAATGCCGATATCACGGCTTCTGCGGTGGAGCTAAAAGTGCTTATTGAACAAATGCGTGAGCAAATTCAGA
ATTTAGAATAGGAAAGCAGA

Downstream 100 bases:

>100_bases
GAAAGAAAAAAAGAATCAGGCATTACCCTGATCTTTTTTCTATTTAGTAAAGTACTCTAGCACGAATTGTGCCATCAATT
TCCTTCAATTTTGTCAGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 279

Protein sequence:

>280_residues
MSQFISLTQYQLIEVQGADAEKYLQGQLTSDVVRLASGATTLTAHCDPKGKMNAIYRLFKVSSEQFFLLVKKDILPSGLD
ALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEIDEQRSILLNESELPVNFNGDEKIWEVADIQAGLPNLSPQTQ
NEFIPQALNLQAIEQAISFTKGCYIGQETVARAKYRGANKRAMFIFKAQTQQEAEIGSEIEMQLEANWRKTGTITSAVNL
DGVLWLQVVMNNDIDSEQQFRLPSNEILLERVQLPYSITE

Sequences:

>Translated_280_residues
MSQFISLTQYQLIEVQGADAEKYLQGQLTSDVVRLASGATTLTAHCDPKGKMNAIYRLFKVSSEQFFLLVKKDILPSGLD
ALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEIDEQRSILLNESELPVNFNGDEKIWEVADIQAGLPNLSPQTQ
NEFIPQALNLQAIEQAISFTKGCYIGQETVARAKYRGANKRAMFIFKAQTQQEAEIGSEIEMQLEANWRKTGTITSAVNL
DGVLWLQVVMNNDIDSEQQFRLPSNEILLERVQLPYSITE
>Mature_279_residues
SQFISLTQYQLIEVQGADAEKYLQGQLTSDVVRLASGATTLTAHCDPKGKMNAIYRLFKVSSEQFFLLVKKDILPSGLDA
LKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEIDEQRSILLNESELPVNFNGDEKIWEVADIQAGLPNLSPQTQN
EFIPQALNLQAIEQAISFTKGCYIGQETVARAKYRGANKRAMFIFKAQTQQEAEIGSEIEMQLEANWRKTGTITSAVNLD
GVLWLQVVMNNDIDSEQQFRLPSNEILLERVQLPYSITE

Specific function: Unknown

COG id: COG0354

COG function: function code R; Predicted aminomethyltransferase related to GcvT

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ygfZ (UP14) and B.aphidicola (subsp. Acyrthosiphon pisum) BU435 [H]

Homologues:

Organism=Escherichia coli, GI1789265, Length=308, Percent_Identity=36.6883116883117, Blast_Score=182, Evalue=2e-47,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017703
- InterPro:   IPR006222 [H]

Pfam domain/function: PF01571 GCV_T [H]

EC number: NA

Molecular weight: Translated: 31514; Mature: 31383

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQFISLTQYQLIEVQGADAEKYLQGQLTSDVVRLASGATTLTAHCDPKGKMNAIYRLFK
CCCHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHH
VSSEQFFLLVKKDILPSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEID
CCCCEEEEEEECCCCCCHHHHHHHHHHHHHEEECCCCEEEEEEEHHHCCCCCCCEEEEEC
EQRSILLNESELPVNFNGDEKIWEVADIQAGLPNLSPQTQNEFIPQALNLQAIEQAISFT
CCCCEEECCCCCCEEECCCCCEEEEHHHHCCCCCCCCCCCHHHCCHHCCHHHHHHHHHHH
KGCYIGQETVARAKYRGANKRAMFIFKAQTQQEAEIGSEIEMQLEANWRKTGTITSAVNL
CCCCCCHHHHHHHHHCCCCCEEEEEEECCCCHHHHCCCEEEEEEECCCCCCCCEEEEECC
DGVLWLQVVMNNDIDSEQQFRLPSNEILLERVQLPYSITE
CCEEEEEEEECCCCCCCHHCCCCCHHHHHHHHCCCEECCC
>Mature Secondary Structure 
SQFISLTQYQLIEVQGADAEKYLQGQLTSDVVRLASGATTLTAHCDPKGKMNAIYRLFK
CCHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHH
VSSEQFFLLVKKDILPSGLDALKKYAVFSKVSFDLRDWQIIGVIGEKCGKITPHFSLEID
CCCCEEEEEEECCCCCCHHHHHHHHHHHHHEEECCCCEEEEEEEHHHCCCCCCCEEEEEC
EQRSILLNESELPVNFNGDEKIWEVADIQAGLPNLSPQTQNEFIPQALNLQAIEQAISFT
CCCCEEECCCCCCEEECCCCCEEEEHHHHCCCCCCCCCCCHHHCCHHCCHHHHHHHHHHH
KGCYIGQETVARAKYRGANKRAMFIFKAQTQQEAEIGSEIEMQLEANWRKTGTITSAVNL
CCCCCCHHHHHHHHHCCCCCEEEEEEECCCCHHHHCCCEEEEEEECCCCCCCCEEEEECC
DGVLWLQVVMNNDIDSEQQFRLPSNEILLERVQLPYSITE
CCEEEEEEEECCCCCCCHHCCCCCHHHHHHHHCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]