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The map label for this gene is 148825200

Identifier: 148825200

GI number: 148825200

Start: 67132

End: 67680

Strand: Direct

Name: 148825200

Synonym: CGSHiEE_00360

Alternate gene names: NA

Gene position: 67132-67680 (Clockwise)

Preceding gene: 148825198

Following gene: 148825201

Centisome position: 3.7

GC content: 38.07

Gene sequence:

>549_bases
ATGCGCAATGATCATATTGGGCAAAATGCAAAGGCACCGGTCGATTATTATATGTTGGCATTATCTTGGTCGCCTGGATT
TTGTGATATTCAGCGTGAAAAATATGGCGATCAGTTGCCTTATTCCTCTCAATATCAATGTGGAAATAACCGCACTTTTG
GTTGGGTTGTACATGGATTATGGCCTCAAAATGCAAATGCTCGCGCTGTTTCAGATCATCCTCGTTTTTGCAAAGGCGAT
TTACCCGCCTTGCCAAAAGGTTTATTAGCACAATATTTGGCGATTTCTCCGGGCGAGAAATTATTGCAAGGCGAATGGGA
AAAACATGGTAGTTGCGCCTTTGATTCTGCCCAGCAATATTTTGCTAAGGAGCAGGAATTATTTAACGCATTAAAATTAC
CGAATCAAAAATTAAGTAGAGATGAACTTTTTGGTTGGATGAAGCAACATAATCCACAATTAAAAAATGCGTATTTGAGG
GCTAGTCGAAATGAATTATTTATTTGTTATGATAAAAAATGGCAGGTAATGAATTGCCAAAGCAAATAA

Upstream 100 bases:

>100_bases
ATCTGAGCCTAAATTTGAGCCTAAATTTGAGACAAAGCGGACGGATATTGAAAAAAGTGCGGTAAAAAATCCAGATGTTT
TTGCAAACTATGATGTGATT

Downstream 100 bases:

>100_bases
GAATTTCTTTGATCTAAATCGTTACAACCTAGCACGAAGTAGGTATAATACGAGAAGTTTTCAATTTTAATTTTAACTTA
ACAAGAGGATAGATTATGTC

Product: thymidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MRNDHIGQNAKAPVDYYMLALSWSPGFCDIQREKYGDQLPYSSQYQCGNNRTFGWVVHGLWPQNANARAVSDHPRFCKGD
LPALPKGLLAQYLAISPGEKLLQGEWEKHGSCAFDSAQQYFAKEQELFNALKLPNQKLSRDELFGWMKQHNPQLKNAYLR
ASRNELFICYDKKWQVMNCQSK

Sequences:

>Translated_182_residues
MRNDHIGQNAKAPVDYYMLALSWSPGFCDIQREKYGDQLPYSSQYQCGNNRTFGWVVHGLWPQNANARAVSDHPRFCKGD
LPALPKGLLAQYLAISPGEKLLQGEWEKHGSCAFDSAQQYFAKEQELFNALKLPNQKLSRDELFGWMKQHNPQLKNAYLR
ASRNELFICYDKKWQVMNCQSK
>Mature_182_residues
MRNDHIGQNAKAPVDYYMLALSWSPGFCDIQREKYGDQLPYSSQYQCGNNRTFGWVVHGLWPQNANARAVSDHPRFCKGD
LPALPKGLLAQYLAISPGEKLLQGEWEKHGSCAFDSAQQYFAKEQELFNALKLPNQKLSRDELFGWMKQHNPQLKNAYLR
ASRNELFICYDKKWQVMNCQSK

Specific function: Unknown

COG id: COG3719

COG function: function code J; Ribonuclease I

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNase T2 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RN26_HAEIN (P44012)

Other databases:

- EMBL:   L42023
- PIR:   C64009
- RefSeq:   NP_438684.1
- ProteinModelPortal:   P44012
- GeneID:   949589
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0526
- NMPDR:   fig|71421.1.peg.497
- TIGR:   HI_0526
- HOGENOM:   HBG296618
- OMA:   LLQGEWE
- ProtClustDB:   CLSK808418
- BioCyc:   HINF71421:HI_0526-MONOMER
- InterPro:   IPR001568
- InterPro:   IPR018188
- Gene3D:   G3DSA:3.90.730.10

Pfam domain/function: PF00445 Ribonuclease_T2; SSF55895 RNase_T2

EC number: NA

Molecular weight: Translated: 21022; Mature: 21022

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: PS00530 RNASE_T2_1; PS00531 RNASE_T2_2

Important sites: ACT_SITE 148-148 ACT_SITE 195-195 ACT_SITE 199-199

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNDHIGQNAKAPVDYYMLALSWSPGFCDIQREKYGDQLPYSSQYQCGNNRTFGWVVHGL
CCCCCCCCCCCCCCEEEEEEEECCCCCEECCHHHCCCCCCCCCCCCCCCCCEEEEEEEEE
WPQNANARAVSDHPRFCKGDLPALPKGLLAQYLAISPGEKLLQGEWEKHGSCAFDSAQQY
CCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHH
FAKEQELFNALKLPNQKLSRDELFGWMKQHNPQLKNAYLRASRNELFICYDKKWQVMNCQ
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEECCCEEEECCC
SK
CC
>Mature Secondary Structure
MRNDHIGQNAKAPVDYYMLALSWSPGFCDIQREKYGDQLPYSSQYQCGNNRTFGWVVHGL
CCCCCCCCCCCCCCEEEEEEEECCCCCEECCHHHCCCCCCCCCCCCCCCCCEEEEEEEEE
WPQNANARAVSDHPRFCKGDLPALPKGLLAQYLAISPGEKLLQGEWEKHGSCAFDSAQQY
CCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHH
FAKEQELFNALKLPNQKLSRDELFGWMKQHNPQLKNAYLRASRNELFICYDKKWQVMNCQ
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEECCCEEEECCC
SK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800