Click here to switch to the map view.

The map label for this gene is ureF [H]

Identifier: 148825189

GI number: 148825189

Start: 54991

End: 55698

Strand: Direct

Name: ureF [H]

Synonym: CGSHiEE_00305

Alternate gene names: 148825189

Gene position: 54991-55698 (Clockwise)

Preceding gene: 148825188

Following gene: 148825190

Centisome position: 3.03

GC content: 48.16

Gene sequence:

>708_bases
TTGGCACAAACATTAAACCGCTCTTTAACGGATTTAGGTGCGTTGTTGCACTTGGTCGATCCCACCTTACCGATTGGCGG
ATTTAACCATTCCAATGGCTTGGAAACCTTCGTCCAGCAACGTGTGGTAGAAAGCAAAGCGACCCTAGAAGAATATGTGC
AAACCCAGCTTTTACAAAACTGGATTTACAACGACGGGGCGTATCTTTCCCTTGCCTTCGATGCAATGAACGAGGGCAAT
TTTGACCGCTTGTGCGAACTGGATTGGCAACTTTCCGCCACCAAAGTGGCACGCGAAAGCCGCGAAGGGAGTTTCAAACT
CGGTGTGCGATTGCTGAAAATTTTTATTCGCTATGAAACACATACGTTGCTCACAGCTTACCAGCAAGCGATTGCAGAAA
AACGCGTGCAGGGCTATTTCCCAATAGTGTTTGCAATGGTTGCTCAAGCCATGGGCTTAACCAAAGCCGACACACTCTAT
GCGTTCTACTACAACGCAGCAGTCGGTGCAATCACTAACGGCGTGAAGCTAATTCCTCTCAGCCAAATGGATGGGCAAGA
TATTCTGTTTGACTTGCGTGGCTCGCTCGTACAAGCGGTGGAATTAAGCCTTGACCCTGACGAAGAATGGCTTGGTGCGG
CAACGCTGGCGAATGATATTCGGGCTATGCAACACGAAGTGCTTTATACGCGACTTTATATGTCGTAA

Upstream 100 bases:

>100_bases
GTTTAAGCCAAGCGTTGAGAGCTAACTCTGCACAAGGTCACGGGCATTCTCACAGTCATTCGCATGATCATCATGGCTAT
CATCATCACGGAGATGGACA

Downstream 100 bases:

>100_bases
GTGCGGTTATTTTTTATTGAGATTTTACTTGTAGGGGCAAATCAAATTTGCCCTTGAACATTCGTTGATATATTGGGGCA
AATGTAACTTGCCCCTACAC

Product: urease accessory protein UreF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MAQTLNRSLTDLGALLHLVDPTLPIGGFNHSNGLETFVQQRVVESKATLEEYVQTQLLQNWIYNDGAYLSLAFDAMNEGN
FDRLCELDWQLSATKVARESREGSFKLGVRLLKIFIRYETHTLLTAYQQAIAEKRVQGYFPIVFAMVAQAMGLTKADTLY
AFYYNAAVGAITNGVKLIPLSQMDGQDILFDLRGSLVQAVELSLDPDEEWLGAATLANDIRAMQHEVLYTRLYMS

Sequences:

>Translated_235_residues
MAQTLNRSLTDLGALLHLVDPTLPIGGFNHSNGLETFVQQRVVESKATLEEYVQTQLLQNWIYNDGAYLSLAFDAMNEGN
FDRLCELDWQLSATKVARESREGSFKLGVRLLKIFIRYETHTLLTAYQQAIAEKRVQGYFPIVFAMVAQAMGLTKADTLY
AFYYNAAVGAITNGVKLIPLSQMDGQDILFDLRGSLVQAVELSLDPDEEWLGAATLANDIRAMQHEVLYTRLYMS
>Mature_234_residues
AQTLNRSLTDLGALLHLVDPTLPIGGFNHSNGLETFVQQRVVESKATLEEYVQTQLLQNWIYNDGAYLSLAFDAMNEGNF
DRLCELDWQLSATKVARESREGSFKLGVRLLKIFIRYETHTLLTAYQQAIAEKRVQGYFPIVFAMVAQAMGLTKADTLYA
FYYNAAVGAITNGVKLIPLSQMDGQDILFDLRGSLVQAVELSLDPDEEWLGAATLANDIRAMQHEVLYTRLYMS

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter [H]

COG id: COG0830

COG function: function code O; Urease accessory protein UreF

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002639 [H]

Pfam domain/function: PF01730 UreF [H]

EC number: NA

Molecular weight: Translated: 26384; Mature: 26252

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQTLNRSLTDLGALLHLVDPTLPIGGFNHSNGLETFVQQRVVESKATLEEYVQTQLLQN
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WIYNDGAYLSLAFDAMNEGNFDRLCELDWQLSATKVARESREGSFKLGVRLLKIFIRYET
HHCCCCCEEEEEEECCCCCCHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
HTLLTAYQQAIAEKRVQGYFPIVFAMVAQAMGLTKADTLYAFYYNAAVGAITNGVKLIPL
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEEE
SQMDGQDILFDLRGSLVQAVELSLDPDEEWLGAATLANDIRAMQHEVLYTRLYMS
CCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AQTLNRSLTDLGALLHLVDPTLPIGGFNHSNGLETFVQQRVVESKATLEEYVQTQLLQN
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WIYNDGAYLSLAFDAMNEGNFDRLCELDWQLSATKVARESREGSFKLGVRLLKIFIRYET
HHCCCCCEEEEEEECCCCCCHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
HTLLTAYQQAIAEKRVQGYFPIVFAMVAQAMGLTKADTLYAFYYNAAVGAITNGVKLIPL
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEEE
SQMDGQDILFDLRGSLVQAVELSLDPDEEWLGAATLANDIRAMQHEVLYTRLYMS
CCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA