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The map label for this gene is 148825168

Identifier: 148825168

GI number: 148825168

Start: 39291

End: 39737

Strand: Direct

Name: 148825168

Synonym: CGSHiEE_00200

Alternate gene names: NA

Gene position: 39291-39737 (Clockwise)

Preceding gene: 148825167

Following gene: 148825169

Centisome position: 2.17

GC content: 38.93

Gene sequence:

>447_bases
ATGGATCGTACATTAATCGTTTTTGATATGGATACGCACTGTTTGGAAAGATATTATCATAATCCAAGCTGGCGTAATGC
TTATGCGGATATTCAACGTATTTTAAAGAAACACGGTTTTATGAATATTCAAGGTACGGTGTATTTAAGTGATGTCGGCA
TTAAACAAGCCCATGGCACATTGGCATTGCAAGAGGTTGCCGCGCGCTTTGAATGGTTTGCTGCTTGTGCTTCCAACATT
CAATTTTATGAATTAAAAGACGACTTCAACGCGCAATTTATTGTGGATGGAGTACAACGTGCGCGTGAAGCATTTCAACG
TTCGCTTGATAGTTTACGTCAAGAATTATTACAAGCGGGTTTGCCTGCTAATAAGGTAGAAGAGATTGTAGGAAAACGCC
AGTTTTCGTTGCAACAAATACAAGAAAACAGTGTATCACAAGATTAG

Upstream 100 bases:

>100_bases
GAAAACTTGCCTTATCCCGCTGCAAAAATTAAAGCAAAAAATGGGGTAACGGAGTGGTATTTGGATAAAGCAGCGGCACA
GTTATTATAATCGGGTAAAA

Downstream 100 bases:

>100_bases
TATGAGAAATTGTATAAAATTTAATGTATATTTTGACCGCACTTTTAGGTAGCAAGAAGATGGATTACTGATAGCACACG
CTTCATAGCCTGTGTTTGTA

Product: virulence-associated protein D

Products: NA

Alternate protein names: VapD-Related Protein; Virulence Associated Protein D

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MDRTLIVFDMDTHCLERYYHNPSWRNAYADIQRILKKHGFMNIQGTVYLSDVGIKQAHGTLALQEVAARFEWFAACASNI
QFYELKDDFNAQFIVDGVQRAREAFQRSLDSLRQELLQAGLPANKVEEIVGKRQFSLQQIQENSVSQD

Sequences:

>Translated_148_residues
MDRTLIVFDMDTHCLERYYHNPSWRNAYADIQRILKKHGFMNIQGTVYLSDVGIKQAHGTLALQEVAARFEWFAACASNI
QFYELKDDFNAQFIVDGVQRAREAFQRSLDSLRQELLQAGLPANKVEEIVGKRQFSLQQIQENSVSQD
>Mature_148_residues
MDRTLIVFDMDTHCLERYYHNPSWRNAYADIQRILKKHGFMNIQGTVYLSDVGIKQAHGTLALQEVAARFEWFAACASNI
QFYELKDDFNAQFIVDGVQRAREAFQRSLDSLRQELLQAGLPANKVEEIVGKRQFSLQQIQENSVSQD

Specific function: Unknown

COG id: COG3309

COG function: function code S; Uncharacterized virulence-associated protein D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17116; Mature: 17116

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRTLIVFDMDTHCLERYYHNPSWRNAYADIQRILKKHGFMNIQGTVYLSDVGIKQAHGT
CCCEEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHH
LALQEVAARFEWFAACASNIQFYELKDDFNAQFIVDGVQRAREAFQRSLDSLRQELLQAG
HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LPANKVEEIVGKRQFSLQQIQENSVSQD
CCHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDRTLIVFDMDTHCLERYYHNPSWRNAYADIQRILKKHGFMNIQGTVYLSDVGIKQAHGT
CCCEEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHH
LALQEVAARFEWFAACASNIQFYELKDDFNAQFIVDGVQRAREAFQRSLDSLRQELLQAG
HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LPANKVEEIVGKRQFSLQQIQENSVSQD
CCHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA