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The map label for this gene is greB [C]

Identifier: 148825153

GI number: 148825153

Start: 24073

End: 26385

Strand: Direct

Name: greB [C]

Synonym: CGSHiEE_00125

Alternate gene names: 148825153

Gene position: 24073-26385 (Clockwise)

Preceding gene: 148825151

Following gene: 148825154

Centisome position: 1.33

GC content: 41.46

Gene sequence:

>2313_bases
ATGTTAAATCAACAAATTAGCCAAATTATTGCGGCAGAATTAACCGTTCAACCCCAACAAATTCTTGCTGCCATTCAATT
ATTAGATGATGGCAACACCATTCCATTTATCGCCCGTTATCGTAAAGAAGCCACAGGGGGCTTAGATGACACCCAGCTTC
GCCATTTTGAAACCCGTTTAATTTATTTACGTGAATTAGAAGAACGTCGTCAAACCATCTTGAAATCTATTGAAGAGCAA
GGAAAATTGACCGATGAATTGCGTGACAAAATTCATGCGACACAAAGCAAAACCGAATTAGAAGATTTATATTTGCCGTA
CAAACCTAAACGTCGCACCAAAGGGCAAATTGCCATTGAAGCTGGTCTTGAGCCATTGGCTAATTTACTTTGGAATGAGC
CAAAAAATGATCCAGAATCAACCGCACTTTCCTTTGTGGATGCTGATAAAGGCGTGACAGACACCAAAGTAGCCCTTGAT
GGTGCACGCTATATTTTAATGGAACGTTTTGCTGAAGATGCAGGTTTATTAGCGAAAGTTCGTGATTATTTAGCAAAAAA
TGCCGTTATCGTATCAAAAGTGATCGAAGGCAAAGAAACGGAAGGCGCAAAATTCCAAGATTATTTCGATCATCAAGAAT
TATTGAAAAATGTGCCTTCTCATCGTGCATTGGCTATGTTCCGTGGACGTAATGAGGGCATTTTACAATTAAGTTTAAAT
GCTGATCCTGATGCGGAAGAAGGAAGTCGCCAAAGCTATTGTGAAGAGATTATTCGTGATTATTTAGATGTGCGTTTCAC
GGGACAGCCAGCAGATAAATGGCGTGAGCAAGTGATTGCGTGGACGTGGAAAATCAAAGTTTCGTTGCATTTAGAAACGG
AATTAATGGCAAGTTTACGTGAAAAAGCGGAAGAAGAAGCCATTGATGTTTTCGCTCGAAATCTGACCGCACTTTTAATG
GCGGCACCGGCTGGTGCGAAAAGTACTATGGGCTTGGACCCAGGCTTGCGTACAGGGGTTAAAGTTGCGGTGGTGGATAA
CACAGGTAAATTATTAGATACCACCACCATTTATCCACACACGGGGCGTGAAGCTGAAGCGCAAGTGGCGATTTTCAGCT
TAATCCGCAAACATAACGTAGAATTAATTGCCATTGGTAATGGTACGGCTTCTCGTGAAACCGAACGCTTTGCGAAAGAA
GTGATTAAAGAAATTAAAGAAAATAAACCTCAAACCGTTGTAGTGAGCGAAGCAGGTGCATCCGTTTATTCTGCTTCTGA
ATTTGCCGCAAATGAATTCCCTAATTTAGATGTATCTTTACGTGGTGCGGTATCAATTGCGCGTCGTTTACAAGATCCAT
TGGCAGAATTAGTGAAAATCGAACCCAAAGCCATTGGTGTAGGGCAATATCAGCACGATGTAAACCAAAGCCAACTTGCA
CGTAAACTTGATGCGGTGGTGGAAGATTGTGTAAACGCGGTAGGTGTGGATTTGAATACAGCATCCGCGCCATTGCTTGC
TCGTGTGGCTGGGATGACTAAAACCTTAGCGCAAAACATTGTGGAATATCGTGATGAAAATGGTCGTTTTGAAAGCCGTA
GAGAATTGAAAAAAGTGCCTCGTTTAGGGCCAAAAGCCTTTGAACAATGTGCAGGTTTTATGCGTATTGCAGGCGGGAAA
AATCCACTTGATGCTTCAGGTGTTCACCCAGAGGCTTATCCTGTGGTCGAAAAAATTTTGCAAGCTACCGCACAATCTAT
CCAAGATTTAATGGGTAATTCGGGTGTGGTTCGTCAGCTTGATGCGAAACAATTTATTGATGAACAATTCGGTTTACCAA
CGGTTCAAGATATTTTTAAAGAATTGGAAAAACCGGGTCGTGATCCACGAGGCGAGTTCAAAACTGCTGTATTTGCTGAA
GGGGTGGAAGAAATCACGGATTTAAAATCTGGAATGATTTTAGAAGGAACAGTGACTAATGTAACCAATTTTGGCGCATT
TGTGGATATTGGTGTTCATCAAGATGGTTTAGTACATATTTCATCATTAAGCGATAAATTCGTGGAAGATCCCCATCAAG
TGGTAAAAACAGGCAACATTGTAAAAGTCAAAGTGTTAGAAGTGGATGTGCCACGTAAACGCATTGCATTGACGATGCGA
TTAGATGAAAGTGCGGTCAAAAATGACAGTAAATCTGACCGCACTTTATCTGCCAGACCTCGTGGAAATACGCAGCGAGA
GGATCGTAATTCAAGAGGTAATAATGCGATGGGTAATGCCTTTGCTGATGCGTTAAAAAATTGGAAAAAATAA

Upstream 100 bases:

>100_bases
GCCATAATAAAAATAAAAGAAAGTTTTTTGAATTATATTTGAGCCAGCCCACTAAAACCAGTATTCTATCTTCGTTTTTT
TATAATAAAGAAGTACGACA

Downstream 100 bases:

>100_bases
CAAGTTATGGGGCGAAATTATTCGCCCTTTTTTTATATCTTTCCTTTCCCGAAAAGCATCGCCAAAACGGCGATTTTTTG
CTATAATCCCGCCCAATTTT

Product: transcription elongation factor GreB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 770; Mature: 770

Protein sequence:

>770_residues
MLNQQISQIIAAELTVQPQQILAAIQLLDDGNTIPFIARYRKEATGGLDDTQLRHFETRLIYLRELEERRQTILKSIEEQ
GKLTDELRDKIHATQSKTELEDLYLPYKPKRRTKGQIAIEAGLEPLANLLWNEPKNDPESTALSFVDADKGVTDTKVALD
GARYILMERFAEDAGLLAKVRDYLAKNAVIVSKVIEGKETEGAKFQDYFDHQELLKNVPSHRALAMFRGRNEGILQLSLN
ADPDAEEGSRQSYCEEIIRDYLDVRFTGQPADKWREQVIAWTWKIKVSLHLETELMASLREKAEEEAIDVFARNLTALLM
AAPAGAKSTMGLDPGLRTGVKVAVVDNTGKLLDTTTIYPHTGREAEAQVAIFSLIRKHNVELIAIGNGTASRETERFAKE
VIKEIKENKPQTVVVSEAGASVYSASEFAANEFPNLDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVNQSQLA
RKLDAVVEDCVNAVGVDLNTASAPLLARVAGMTKTLAQNIVEYRDENGRFESRRELKKVPRLGPKAFEQCAGFMRIAGGK
NPLDASGVHPEAYPVVEKILQATAQSIQDLMGNSGVVRQLDAKQFIDEQFGLPTVQDIFKELEKPGRDPRGEFKTAVFAE
GVEEITDLKSGMILEGTVTNVTNFGAFVDIGVHQDGLVHISSLSDKFVEDPHQVVKTGNIVKVKVLEVDVPRKRIALTMR
LDESAVKNDSKSDRTLSARPRGNTQREDRNSRGNNAMGNAFADALKNWKK

Sequences:

>Translated_770_residues
MLNQQISQIIAAELTVQPQQILAAIQLLDDGNTIPFIARYRKEATGGLDDTQLRHFETRLIYLRELEERRQTILKSIEEQ
GKLTDELRDKIHATQSKTELEDLYLPYKPKRRTKGQIAIEAGLEPLANLLWNEPKNDPESTALSFVDADKGVTDTKVALD
GARYILMERFAEDAGLLAKVRDYLAKNAVIVSKVIEGKETEGAKFQDYFDHQELLKNVPSHRALAMFRGRNEGILQLSLN
ADPDAEEGSRQSYCEEIIRDYLDVRFTGQPADKWREQVIAWTWKIKVSLHLETELMASLREKAEEEAIDVFARNLTALLM
AAPAGAKSTMGLDPGLRTGVKVAVVDNTGKLLDTTTIYPHTGREAEAQVAIFSLIRKHNVELIAIGNGTASRETERFAKE
VIKEIKENKPQTVVVSEAGASVYSASEFAANEFPNLDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVNQSQLA
RKLDAVVEDCVNAVGVDLNTASAPLLARVAGMTKTLAQNIVEYRDENGRFESRRELKKVPRLGPKAFEQCAGFMRIAGGK
NPLDASGVHPEAYPVVEKILQATAQSIQDLMGNSGVVRQLDAKQFIDEQFGLPTVQDIFKELEKPGRDPRGEFKTAVFAE
GVEEITDLKSGMILEGTVTNVTNFGAFVDIGVHQDGLVHISSLSDKFVEDPHQVVKTGNIVKVKVLEVDVPRKRIALTMR
LDESAVKNDSKSDRTLSARPRGNTQREDRNSRGNNAMGNAFADALKNWKK
>Mature_770_residues
MLNQQISQIIAAELTVQPQQILAAIQLLDDGNTIPFIARYRKEATGGLDDTQLRHFETRLIYLRELEERRQTILKSIEEQ
GKLTDELRDKIHATQSKTELEDLYLPYKPKRRTKGQIAIEAGLEPLANLLWNEPKNDPESTALSFVDADKGVTDTKVALD
GARYILMERFAEDAGLLAKVRDYLAKNAVIVSKVIEGKETEGAKFQDYFDHQELLKNVPSHRALAMFRGRNEGILQLSLN
ADPDAEEGSRQSYCEEIIRDYLDVRFTGQPADKWREQVIAWTWKIKVSLHLETELMASLREKAEEEAIDVFARNLTALLM
AAPAGAKSTMGLDPGLRTGVKVAVVDNTGKLLDTTTIYPHTGREAEAQVAIFSLIRKHNVELIAIGNGTASRETERFAKE
VIKEIKENKPQTVVVSEAGASVYSASEFAANEFPNLDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVNQSQLA
RKLDAVVEDCVNAVGVDLNTASAPLLARVAGMTKTLAQNIVEYRDENGRFESRRELKKVPRLGPKAFEQCAGFMRIAGGK
NPLDASGVHPEAYPVVEKILQATAQSIQDLMGNSGVVRQLDAKQFIDEQFGLPTVQDIFKELEKPGRDPRGEFKTAVFAE
GVEEITDLKSGMILEGTVTNVTNFGAFVDIGVHQDGLVHISSLSDKFVEDPHQVVKTGNIVKVKVLEVDVPRKRIALTMR
LDESAVKNDSKSDRTLSARPRGNTQREDRNSRGNNAMGNAFADALKNWKK

Specific function: Unknown

COG id: COG2183

COG function: function code K; Transcriptional accessory protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Homo sapiens, GI221136781, Length=796, Percent_Identity=34.4221105527638, Blast_Score=401, Evalue=1e-111,
Organism=Homo sapiens, GI27597090, Length=716, Percent_Identity=23.6033519553073, Blast_Score=109, Evalue=9e-24,
Organism=Escherichia coli, GI87082262, Length=759, Percent_Identity=72.068511198946, Blast_Score=1113, Evalue=0.0,
Organism=Escherichia coli, GI1787140, Length=76, Percent_Identity=40.7894736842105, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI145693187, Length=80, Percent_Identity=46.25, Blast_Score=63, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17511129, Length=707, Percent_Identity=28.995756718529, Blast_Score=231, Evalue=1e-60,
Organism=Caenorhabditis elegans, GI17552892, Length=688, Percent_Identity=21.8023255813953, Blast_Score=89, Evalue=7e-18,
Organism=Saccharomyces cerevisiae, GI6321552, Length=223, Percent_Identity=26.9058295964126, Blast_Score=67, Evalue=9e-12,
Organism=Drosophila melanogaster, GI62484314, Length=784, Percent_Identity=31.6326530612245, Blast_Score=382, Evalue=1e-106,
Organism=Drosophila melanogaster, GI24640080, Length=436, Percent_Identity=22.0183486238532, Blast_Score=81, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003583
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR022967
- InterPro:   IPR018974
- InterPro:   IPR023097 [H]

Pfam domain/function: PF00575 S1; PF09371 Tex_N [H]

EC number: NA

Molecular weight: Translated: 85438; Mature: 85438

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNQQISQIIAAELTVQPQQILAAIQLLDDGNTIPFIARYRKEATGGLDDTQLRHFETRL
CCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHH
IYLRELEERRQTILKSIEEQGKLTDELRDKIHATQSKTELEDLYLPYKPKRRTKGQIAIE
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCEEEH
AGLEPLANLLWNEPKNDPESTALSFVDADKGVTDTKVALDGARYILMERFAEDAGLLAKV
HCHHHHHHHHCCCCCCCCHHHHEEHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RDYLAKNAVIVSKVIEGKETEGAKFQDYFDHQELLKNVPSHRALAMFRGRNEGILQLSLN
HHHHHHCHHHHHHHHCCCCCCCCCHHHHCCHHHHHHCCCCHHHHHHHCCCCCCEEEEEEC
ADPDAEEGSRQSYCEEIIRDYLDVRFTGQPADKWREQVIAWTWKIKVSLHLETELMASLR
CCCCCCCCCHHHHHHHHHHHHHCEEECCCCHHHHHHHHEEEEEEEEEEEEEHHHHHHHHH
EKAEEEAIDVFARNLTALLMAAPAGAKSTMGLDPGLRTGVKVAVVDNTGKLLDTTTIYPH
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCC
TGREAEAQVAIFSLIRKHNVELIAIGNGTASRETERFAKEVIKEIKENKPQTVVVSEAGA
CCCCCHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCC
SVYSASEFAANEFPNLDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVNQSQLA
CHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHH
RKLDAVVEDCVNAVGVDLNTASAPLLARVAGMTKTLAQNIVEYRDENGRFESRRELKKVP
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC
RLGPKAFEQCAGFMRIAGGKNPLDASGVHPEAYPVVEKILQATAQSIQDLMGNSGVVRQL
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEHH
DAKQFIDEQFGLPTVQDIFKELEKPGRDPRGEFKTAVFAEGVEEITDLKSGMILEGTVTN
HHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCHHC
VTNFGAFVDIGVHQDGLVHISSLSDKFVEDPHQVVKTGNIVKVKVLEVDVPRKRIALTMR
HHCCCCEEEECCCCCCCEEEHHHHHHHHCCHHHHHHCCCEEEEEEEEECCCHHHEEEEEE
LDESAVKNDSKSDRTLSARPRGNTQREDRNSRGNNAMGNAFADALKNWKK
ECHHHHCCCCCCCCEEECCCCCCCCHHHCCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MLNQQISQIIAAELTVQPQQILAAIQLLDDGNTIPFIARYRKEATGGLDDTQLRHFETRL
CCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHH
IYLRELEERRQTILKSIEEQGKLTDELRDKIHATQSKTELEDLYLPYKPKRRTKGQIAIE
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCEEEH
AGLEPLANLLWNEPKNDPESTALSFVDADKGVTDTKVALDGARYILMERFAEDAGLLAKV
HCHHHHHHHHCCCCCCCCHHHHEEHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RDYLAKNAVIVSKVIEGKETEGAKFQDYFDHQELLKNVPSHRALAMFRGRNEGILQLSLN
HHHHHHCHHHHHHHHCCCCCCCCCHHHHCCHHHHHHCCCCHHHHHHHCCCCCCEEEEEEC
ADPDAEEGSRQSYCEEIIRDYLDVRFTGQPADKWREQVIAWTWKIKVSLHLETELMASLR
CCCCCCCCCHHHHHHHHHHHHHCEEECCCCHHHHHHHHEEEEEEEEEEEEEHHHHHHHHH
EKAEEEAIDVFARNLTALLMAAPAGAKSTMGLDPGLRTGVKVAVVDNTGKLLDTTTIYPH
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCC
TGREAEAQVAIFSLIRKHNVELIAIGNGTASRETERFAKEVIKEIKENKPQTVVVSEAGA
CCCCCHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCC
SVYSASEFAANEFPNLDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVNQSQLA
CHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHH
RKLDAVVEDCVNAVGVDLNTASAPLLARVAGMTKTLAQNIVEYRDENGRFESRRELKKVP
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC
RLGPKAFEQCAGFMRIAGGKNPLDASGVHPEAYPVVEKILQATAQSIQDLMGNSGVVRQL
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEHH
DAKQFIDEQFGLPTVQDIFKELEKPGRDPRGEFKTAVFAEGVEEITDLKSGMILEGTVTN
HHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCHHC
VTNFGAFVDIGVHQDGLVHISSLSDKFVEDPHQVVKTGNIVKVKVLEVDVPRKRIALTMR
HHCCCCEEEECCCCCCCEEEHHHHHHHHCCHHHHHHCCCEEEEEEEEECCCHHHEEEEEE
LDESAVKNDSKSDRTLSARPRGNTQREDRNSRGNNAMGNAFADALKNWKK
ECHHHHCCCCCCCCEEECCCCCCCCHHHCCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]