| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148825013
Identifier: 148825013
GI number: 148825013
Start: 4281926
End: 4282834
Strand: Reverse
Name: 148825013
Synonym: TBFG_13840
Alternate gene names: NA
Gene position: 4282834-4281926 (Counterclockwise)
Preceding gene: 148825014
Following gene: 148825012
Centisome position: 96.8
GC content: 64.47
Gene sequence:
>909_bases ATGAGTGAAGATGTGGTGACTCAACCTCCGGCAAACCTGGTCGCCGGGGTGGTCAAGGCGATCCGCCCGCGCCAGTGGGT GAAAAACGTGCTGGTGCTGGCCGCGCCGCTGGCCGCGTTGGGCGGCGGTGTCCGCTACGACTACGTCGAGGTGCTCAGCA AGGTGTCGATGGCCTTCGTGGTGTTCAGCCTGGCCGCCTCGGCGGTGTACCTCGTCAACGATGTGCGTGACGTCGAGGCA GACCGGGAGCACCCCACCAAAAGGTTCCGGCCGATCGCCGCCGGCGTGGTGCCCGAGTGGCTGGCGTACACCGTGGCGGT GGTACTGGGAGTGACATCGCTGGCCGGTGCCTGGATGCTGACCCCGAACCTGGCGCTGGTAATGGTCGTCTACCTCGCCA TGCAGTTGGCGTATTGCTTTGGTCTCAAGCATCAAGCGGTGGTGGAAATCTGCGTCGTGTCGTCGGCGTATTTGATCCGC GCCATCGCCGGGGGCGTGGCCACCAAAATCCCGCTGTCCAAGTGGTTTTTGCTGATCATGGCATTCGGTTCGCTGTTCAT GGTGGCCGGCAAGCGCTACGCCGAGCTGCATCTGGCCGAACGCACCGGCGCTGCGATCCGCAAGTCGCTGGAAAGCTACA CCAGCACCTATCTGCGGTTCGTCTGGACGTTGTCGGCCACCGCGGTGGTCTTGTGCTACGGGCTGTGGGCTTTCGAGCGC GACGGCTACAGCGGGTCCTGGTTCGCGGTGTCGATGATTCCGTTCACCATCGCGATCCTGCGCTACGCGGTGGACGTCGA TGGCGGCCTGGCCGGGGAGCCGGAAGATATCGCGCTGCGTGACCGGGTATTGCAGCTGCTGGCGCTGGCGTGGATAGCAA CGGTTGGGGCCGCTGTTGCCTTCGGCTAG
Upstream 100 bases:
>100_bases CAGTGATGTGGCCGTGGGTGTTGCTCTGGGCGCCACCGTCGGGGCCATCGTGGACAGCGTCGGCGGGGGCCGGCAAAGGG CCCGGAAGAGATGAGCTCGG
Downstream 100 bases:
>100_bases CCTCAAGCTCAACGTCCTCCCAGTCGGGGTGCTGCCCCGCCGGCCGGTGGTCGGGCGGGTCGGTCGGCCGGTGTTTCCGT ATGAGCCCATGGTCCGGGTC
Product: phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MSEDVVTQPPANLVAGVVKAIRPRQWVKNVLVLAAPLAALGGGVRYDYVEVLSKVSMAFVVFSLAASAVYLVNDVRDVEA DREHPTKRFRPIAAGVVPEWLAYTVAVVLGVTSLAGAWMLTPNLALVMVVYLAMQLAYCFGLKHQAVVEICVVSSAYLIR AIAGGVATKIPLSKWFLLIMAFGSLFMVAGKRYAELHLAERTGAAIRKSLESYTSTYLRFVWTLSATAVVLCYGLWAFER DGYSGSWFAVSMIPFTIAILRYAVDVDGGLAGEPEDIALRDRVLQLLALAWIATVGAAVAFG
Sequences:
>Translated_302_residues MSEDVVTQPPANLVAGVVKAIRPRQWVKNVLVLAAPLAALGGGVRYDYVEVLSKVSMAFVVFSLAASAVYLVNDVRDVEA DREHPTKRFRPIAAGVVPEWLAYTVAVVLGVTSLAGAWMLTPNLALVMVVYLAMQLAYCFGLKHQAVVEICVVSSAYLIR AIAGGVATKIPLSKWFLLIMAFGSLFMVAGKRYAELHLAERTGAAIRKSLESYTSTYLRFVWTLSATAVVLCYGLWAFER DGYSGSWFAVSMIPFTIAILRYAVDVDGGLAGEPEDIALRDRVLQLLALAWIATVGAAVAFG >Mature_301_residues SEDVVTQPPANLVAGVVKAIRPRQWVKNVLVLAAPLAALGGGVRYDYVEVLSKVSMAFVVFSLAASAVYLVNDVRDVEAD REHPTKRFRPIAAGVVPEWLAYTVAVVLGVTSLAGAWMLTPNLALVMVVYLAMQLAYCFGLKHQAVVEICVVSSAYLIRA IAGGVATKIPLSKWFLLIMAFGSLFMVAGKRYAELHLAERTGAAIRKSLESYTSTYLRFVWTLSATAVVLCYGLWAFERD GYSGSWFAVSMIPFTIAILRYAVDVDGGLAGEPEDIALRDRVLQLLALAWIATVGAAVAFG
Specific function: Possible permease/transporter [H]
COG id: COG0382
COG function: function code H; 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR000537 [H]
Pfam domain/function: PF01040 UbiA [H]
EC number: NA
Molecular weight: Translated: 32655; Mature: 32524
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEDVVTQPPANLVAGVVKAIRPRQWVKNVLVLAAPLAALGGGVRYDYVEVLSKVSMAFV CCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH VFSLAASAVYLVNDVRDVEADREHPTKRFRPIAAGVVPEWLAYTVAVVLGVTSLAGAWML HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHC TPNLALVMVVYLAMQLAYCFGLKHQAVVEICVVSSAYLIRAIAGGVATKIPLSKWFLLIM CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH AFGSLFMVAGKRYAELHLAERTGAAIRKSLESYTSTYLRFVWTLSATAVVLCYGLWAFER HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DGYSGSWFAVSMIPFTIAILRYAVDVDGGLAGEPEDIALRDRVLQLLALAWIATVGAAVA CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FG CC >Mature Secondary Structure SEDVVTQPPANLVAGVVKAIRPRQWVKNVLVLAAPLAALGGGVRYDYVEVLSKVSMAFV CCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH VFSLAASAVYLVNDVRDVEADREHPTKRFRPIAAGVVPEWLAYTVAVVLGVTSLAGAWML HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHC TPNLALVMVVYLAMQLAYCFGLKHQAVVEICVVSSAYLIRAIAGGVATKIPLSKWFLLIM CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH AFGSLFMVAGKRYAELHLAERTGAAIRKSLESYTSTYLRFVWTLSATAVVLCYGLWAFER HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DGYSGSWFAVSMIPFTIAILRYAVDVDGGLAGEPEDIALRDRVLQLLALAWIATVGAAVA CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FG CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]