| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148824924
Identifier: 148824924
GI number: 148824924
Start: 4175319
End: 4176719
Strand: Direct
Name: 148824924
Synonym: TBFG_13751
Alternate gene names: NA
Gene position: 4175319-4176719 (Clockwise)
Preceding gene: 148824922
Following gene: 148824925
Centisome position: 94.37
GC content: 61.96
Gene sequence:
>1401_bases TTGTCGAGGACTAGGGTATATGCGGTGCCTGTCCCTGGATCTGCACAGTCGGCTTACGCCTGCGGCGTCGAGCGGTTGCT GGCGAGCTATCGATCCATCCCCGCGACTGCATCCATCCGGCTTGCCAAGCCCACCTCAAATCTGTTCCGCGCCCGCGTCA AACACGATGCACGCGGCCTGGACGCATCGGGACTGACCGGTGTCATCGGTATCGATCCCGAGGCCCGCACCGCCGACGTG GCCGGCATGTGCACATACGAGGACCTAATCGCCGCGACACTGCACTACGGTCTGTCACCATTGGTGGTTCCGCAGCTGAG GACGATCACATTGGGCGGAGCGGTCACCGGCTTGGGTATCGAGTCGGCGTCGTTCCGCAACGGCCTGCCCCACGAGTCGG TGCTGGAGATGGATATCCTCACCGGCGCAGGAGAACTTCTCACCGTCTCGCCCGGACAGCACTCCGACTTGTACCGTGCA TTCCCTAACTCGTATGGGACACTGGGCTATTCAACCCGGCTTCGAATCCAGCTGGAGCCGGTCCGGCCGTTTGTCGCGCT GCGGCACATCCGATTTAGCTCGTTGACGGCGATGGTGGCCGCAATGGAGCGCATCATCGACACCGGCGGACTGGACGGCG AATCGGTGGACTATCTCGACGGGGTGGTTTTCAGCGCTGACGAAAGCTACCTGTGCATCGGCATGCAGACGAGCGTACCG GGCCCGGTCAGCGACTACACCGGACAAGACATCTACTACCGGTCGATCCAACACGAGGCGGGGATCAAGGAAGACCGGTT GACCATCCACGATTACTTCTGGCGCTGGGACACCGATTGGTTCTGGTGCTCACGATCGTTTGGTGCCCAAAACCCGCGGC TGCGCCGCTGGTGGCCGCGGCGCTACCGGCGTAGCAGTGTCTACTGGAGGTTGATGGCGCTCGATCAGCGCTTCGGGATC GCCGACCGGTTCGAGAACAGCAGGGGTCGTCCCGCGCGTGAACGGGTGGTGCAGGATATCGAAGTGCCGATCGAACGGAC CTGCGAGTTTCTGGAGTGGTTCGGGGAAAACGTGCCCATTTCGCCAATCTGGTTGTGCCCGTTGCGGCTACGCGATCACG CCGGCTGGCCGCTGTACCCGATCCGGCCTGACCGTAGCTATGTCAACATCGGGTTCTGGTCGTCGGTGCCGGTTGGCGCC ACCGAGGGCGCCACCAACCGCAAGATCGAGAACAAGGTGAGTGCGCTCGACGGGCACAAGTCGCTCTACTCCGACTCCTT CTATACCCGCGAGGAGTTCGACGAGCTCTACGGCGGCGAGACTTACAACACTGTGAAGAAAGCCTACGATCCCGATTCGC GTCTCCTCGATCTTTACGCAAAGGCGGTGCAACGACGATGA
Upstream 100 bases:
>100_bases GCATTGATCAAGATCGTGCTGGCTGCGCTCACCTGTCCCATCAGGGCCGGACTCCTTCGTTTGTGATTGCTGCACCGCCC GCACCCGGATGCAGGGGCAG
Downstream 100 bases:
>100_bases CAACGGGCAGACTCAGCATGGCCGAGATCCTGGAGATCTTCACCGCGACCGGGCAACACCCGCTGAAGTTCACCGCGTAT GACGGCAGCACCGCGGGACA
Product: hypothetical protein
Products: NA
Alternate protein names: FAD Linked Oxidase Domain Protein; FAD Linked Oxidase-Like Protein; Oxidoreductase; Dehydrogenase; FAD Linked Oxidase-Like; FAD/FMN-Dependent Dehydrogenase; FAD Linked Oxidase; FAD/FMN-Containing Dehydrogenase; Fad-Dependent Oxidoreductase
Number of amino acids: Translated: 466; Mature: 465
Protein sequence:
>466_residues MSRTRVYAVPVPGSAQSAYACGVERLLASYRSIPATASIRLAKPTSNLFRARVKHDARGLDASGLTGVIGIDPEARTADV AGMCTYEDLIAATLHYGLSPLVVPQLRTITLGGAVTGLGIESASFRNGLPHESVLEMDILTGAGELLTVSPGQHSDLYRA FPNSYGTLGYSTRLRIQLEPVRPFVALRHIRFSSLTAMVAAMERIIDTGGLDGESVDYLDGVVFSADESYLCIGMQTSVP GPVSDYTGQDIYYRSIQHEAGIKEDRLTIHDYFWRWDTDWFWCSRSFGAQNPRLRRWWPRRYRRSSVYWRLMALDQRFGI ADRFENSRGRPARERVVQDIEVPIERTCEFLEWFGENVPISPIWLCPLRLRDHAGWPLYPIRPDRSYVNIGFWSSVPVGA TEGATNRKIENKVSALDGHKSLYSDSFYTREEFDELYGGETYNTVKKAYDPDSRLLDLYAKAVQRR
Sequences:
>Translated_466_residues MSRTRVYAVPVPGSAQSAYACGVERLLASYRSIPATASIRLAKPTSNLFRARVKHDARGLDASGLTGVIGIDPEARTADV AGMCTYEDLIAATLHYGLSPLVVPQLRTITLGGAVTGLGIESASFRNGLPHESVLEMDILTGAGELLTVSPGQHSDLYRA FPNSYGTLGYSTRLRIQLEPVRPFVALRHIRFSSLTAMVAAMERIIDTGGLDGESVDYLDGVVFSADESYLCIGMQTSVP GPVSDYTGQDIYYRSIQHEAGIKEDRLTIHDYFWRWDTDWFWCSRSFGAQNPRLRRWWPRRYRRSSVYWRLMALDQRFGI ADRFENSRGRPARERVVQDIEVPIERTCEFLEWFGENVPISPIWLCPLRLRDHAGWPLYPIRPDRSYVNIGFWSSVPVGA TEGATNRKIENKVSALDGHKSLYSDSFYTREEFDELYGGETYNTVKKAYDPDSRLLDLYAKAVQRR >Mature_465_residues SRTRVYAVPVPGSAQSAYACGVERLLASYRSIPATASIRLAKPTSNLFRARVKHDARGLDASGLTGVIGIDPEARTADVA GMCTYEDLIAATLHYGLSPLVVPQLRTITLGGAVTGLGIESASFRNGLPHESVLEMDILTGAGELLTVSPGQHSDLYRAF PNSYGTLGYSTRLRIQLEPVRPFVALRHIRFSSLTAMVAAMERIIDTGGLDGESVDYLDGVVFSADESYLCIGMQTSVPG PVSDYTGQDIYYRSIQHEAGIKEDRLTIHDYFWRWDTDWFWCSRSFGAQNPRLRRWWPRRYRRSSVYWRLMALDQRFGIA DRFENSRGRPARERVVQDIEVPIERTCEFLEWFGENVPISPIWLCPLRLRDHAGWPLYPIRPDRSYVNIGFWSSVPVGAT EGATNRKIENKVSALDGHKSLYSDSFYTREEFDELYGGETYNTVKKAYDPDSRLLDLYAKAVQRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI13375618, Length=415, Percent_Identity=26.0240963855422, Blast_Score=127, Evalue=2e-29, Organism=Caenorhabditis elegans, GI17568041, Length=431, Percent_Identity=22.969837587007, Blast_Score=120, Evalue=1e-27, Organism=Caenorhabditis elegans, GI17570305, Length=429, Percent_Identity=23.7762237762238, Blast_Score=104, Evalue=8e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52551; Mature: 52420
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRTRVYAVPVPGSAQSAYACGVERLLASYRSIPATASIRLAKPTSNLFRARVKHDARGL CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCC DASGLTGVIGIDPEARTADVAGMCTYEDLIAATLHYGLSPLVVPQLRTITLGGAVTGLGI CCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEECCCEEEEEECCCEEECCC ESASFRNGLPHESVLEMDILTGAGELLTVSPGQHSDLYRAFPNSYGTLGYSTRLRIQLEP CCCHHHCCCCCHHHEEEHHCCCCCCEEEECCCCCCHHHHHCCCCCCCCCEEEEEEEEEEC VRPFVALRHIRFSSLTAMVAAMERIIDTGGLDGESVDYLDGVVFSADESYLCIGMQTSVP CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCEEEECCCCEEEEEEECCCC GPVSDYTGQDIYYRSIQHEAGIKEDRLTIHDYFWRWDTDWFWCSRSFGAQNPRLRRWWPR CCCCCCCCCCEEEEHHHHHCCCCCCCEEEEEEEEEECCCCEEEECCCCCCCCCHHHHHHH RYRRSSVYWRLMALDQRFGIADRFENSRGRPARERVVQDIEVPIERTCEFLEWFGENVPI HHHCCCCEEEEEEHHHHCCCHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC SPIWLCPLRLRDHAGWPLYPIRPDRSYVNIGFWSSVPVGATEGATNRKIENKVSALDGHK CEEEEECEEECCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCHH SLYSDSFYTREEFDELYGGETYNTVKKAYDPDSRLLDLYAKAVQRR HHHCCCCCCHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHCC >Mature Secondary Structure SRTRVYAVPVPGSAQSAYACGVERLLASYRSIPATASIRLAKPTSNLFRARVKHDARGL CCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCC DASGLTGVIGIDPEARTADVAGMCTYEDLIAATLHYGLSPLVVPQLRTITLGGAVTGLGI CCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEECCCEEEEEECCCEEECCC ESASFRNGLPHESVLEMDILTGAGELLTVSPGQHSDLYRAFPNSYGTLGYSTRLRIQLEP CCCHHHCCCCCHHHEEEHHCCCCCCEEEECCCCCCHHHHHCCCCCCCCCEEEEEEEEEEC VRPFVALRHIRFSSLTAMVAAMERIIDTGGLDGESVDYLDGVVFSADESYLCIGMQTSVP CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCEEEECCCCEEEEEEECCCC GPVSDYTGQDIYYRSIQHEAGIKEDRLTIHDYFWRWDTDWFWCSRSFGAQNPRLRRWWPR CCCCCCCCCCEEEEHHHHHCCCCCCCEEEEEEEEEECCCCEEEECCCCCCCCCHHHHHHH RYRRSSVYWRLMALDQRFGIADRFENSRGRPARERVVQDIEVPIERTCEFLEWFGENVPI HHHCCCCEEEEEEHHHHCCCHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC SPIWLCPLRLRDHAGWPLYPIRPDRSYVNIGFWSSVPVGATEGATNRKIENKVSALDGHK CEEEEECEEECCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCHH SLYSDSFYTREEFDELYGGETYNTVKKAYDPDSRLLDLYAKAVQRR HHHCCCCCCHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA