| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148824750
Identifier: 148824750
GI number: 148824750
Start: 3995909
End: 3996946
Strand: Reverse
Name: 148824750
Synonym: TBFG_13577
Alternate gene names: NA
Gene position: 3996946-3995909 (Counterclockwise)
Preceding gene: 148824751
Following gene: 148824749
Centisome position: 90.34
GC content: 66.57
Gene sequence:
>1038_bases ATGCCCGGTTGCTCACTAATGGATTTCGATCCCACTGCGGAACAGCAAGCCGTCGCCGACGTGGTCACGTCGGTGTTGGA GCGGGACATCTCGTGGGAGGCGCTGGTCTGCGGTGGTGTGACGGCGCTGCCGGTGCCGGAACGTCTCGGCGGCGACGGCG TGGGCCTATTCGAAGTCGGCGCGCTGCTCACCGAGGTGGGTCGCCACGGCGCCGTCACGCCGGCGCTGGCAACGCTGGGT CTTGGGGTGGTGCCGCTGCTCGAGCTGGCATCCGCCGAGCAACAGGACCGCTTCCTGGCCGGGGTGGCCAAGGGAGGAGT ACTGACCGCCGCGCTCAACGAGCCCGGGGCGGCGCTGCCGGATCGGCCTGCCACTAGCTTTGTGGGTGGGCGGTTGTCGG GCACCAAAGTCGGTGTTGGCTACGCCGAACAGGCGGACTGGATGTTGGTGACCGCCGACAACGCCGTCGTGGTGGTGTCG CCGACGGCCGACGGTGTGCGCATGGTTCGTACGCCCACATCGAATGGTTCAGACGAGTATGTGATGACGATGGACGGCGT GGCGGTTGCCGACTGTGACATCCTGGCGGATGTAGCCGCGCACCGGGTCAATCAGCTAGCGCTGGCCGTCATGGGTGCAT ACGCCGACGGGCTGGTCGCCGGGGCGCTGCGGCTGACCGCCGACTACGTGGCGAACCGGAAGCAGTTCGGTAAGCCGCTG TCAACCTTCCAGACCGTGGCCGCGCAGCTCGCCGAGGTTTACATCGCCTCGCGCACCATTGACCTGGTGGCCAAGTCGGT GATCTGGAGACTGGCCGAGGATCTGGATGCGGGAGATGATCTGGGCGTCCTCGGGTACTGGGTGACATCGCAGGCGCCGC CGGCGATGCAACTCTGCCATCACCTGCACGGCGGCATGGGGATGGACGTCACGTATCCGATGCACCGCTACTACTCCACG ATCAAGGACCTCACCCGGCTGCTGGGCGGGCCCTCGCATCGCCTTGAGCTCCTGGGAGCGCGATGTTCATTGACCTGA
Upstream 100 bases:
>100_bases CCGACCACATGCCCGACCTCAAGCCGATCTCGGCGCCCGAGCGGCTGCGGTCCGGCTGGCTCAACGGCATTAAGCACTGG CAGGTCGACTACACCGGTAG
Downstream 100 bases:
>100_bases CGCCGGAGCAGCGCCAGCTGCAAGCCGAGATACGGCAATACTTTTCGAATCTCATCTCGCCCGACGAGCGCACGGAGATG GAGAAAGACCGGCACGGCCC
Product: acyl-CoA dehydrogenase fadE28
Products: NA
Alternate protein names: Acyl-CoA Dehydrogenase Domain-Containing Protein; Acyl-CoA Dehydrogenase Domain Protein; Acyl-CoA Dehydrogenase-Like; Acyl-CoA Dehydrogenase FadE; Pimeloyl-CoA Dehydrogenase Small Subunit; Acyl-CoA Dehydrogenase Family Protein; Acyl-CoA Dehydrogenase-Like Protein; Isovaleryl-CoA Dehydrogenase; Acyl-CoA Dehydrogenase C-Terminal Domain Protein; Acyl-CoA Dehydrogenase Protein; Cyclohexanecarboxyl-CoA Dehydrogenase; Acyl CoA Dehydrogenase; Acyl-CoA Dehydrogenase Short-Chain Specific; Acyl-Coa Dehydrogenase Oxidoreductase; Oxidoreductase; Pimeloyl-CoA Dehydrogenase; Short-Chain Specific Acyl-CoA Dehydrogenase; Pimeloyl-CoA Dehydrogenase PimD-Like; Acyl-CoA Dehydrogenase Oxidoreductase Protein; Acyl-CoA Dehydrogenase C-Terminal; Acyl-CoA Dehydrogenase Long-Chain Specific
Number of amino acids: Translated: 345; Mature: 344
Protein sequence:
>345_residues MPGCSLMDFDPTAEQQAVADVVTSVLERDISWEALVCGGVTALPVPERLGGDGVGLFEVGALLTEVGRHGAVTPALATLG LGVVPLLELASAEQQDRFLAGVAKGGVLTAALNEPGAALPDRPATSFVGGRLSGTKVGVGYAEQADWMLVTADNAVVVVS PTADGVRMVRTPTSNGSDEYVMTMDGVAVADCDILADVAAHRVNQLALAVMGAYADGLVAGALRLTADYVANRKQFGKPL STFQTVAAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWVTSQAPPAMQLCHHLHGGMGMDVTYPMHRYYST IKDLTRLLGGPSHRLELLGARCSLT
Sequences:
>Translated_345_residues MPGCSLMDFDPTAEQQAVADVVTSVLERDISWEALVCGGVTALPVPERLGGDGVGLFEVGALLTEVGRHGAVTPALATLG LGVVPLLELASAEQQDRFLAGVAKGGVLTAALNEPGAALPDRPATSFVGGRLSGTKVGVGYAEQADWMLVTADNAVVVVS PTADGVRMVRTPTSNGSDEYVMTMDGVAVADCDILADVAAHRVNQLALAVMGAYADGLVAGALRLTADYVANRKQFGKPL STFQTVAAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWVTSQAPPAMQLCHHLHGGMGMDVTYPMHRYYST IKDLTRLLGGPSHRLELLGARCSLT >Mature_344_residues PGCSLMDFDPTAEQQAVADVVTSVLERDISWEALVCGGVTALPVPERLGGDGVGLFEVGALLTEVGRHGAVTPALATLGL GVVPLLELASAEQQDRFLAGVAKGGVLTAALNEPGAALPDRPATSFVGGRLSGTKVGVGYAEQADWMLVTADNAVVVVSP TADGVRMVRTPTSNGSDEYVMTMDGVAVADCDILADVAAHRVNQLALAVMGAYADGLVAGALRLTADYVANRKQFGKPLS TFQTVAAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWVTSQAPPAMQLCHHLHGGMGMDVTYPMHRYYSTI KDLTRLLGGPSHRLELLGARCSLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36058; Mature: 35926
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGCSLMDFDPTAEQQAVADVVTSVLERDISWEALVCGGVTALPVPERLGGDGVGLFEVG CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCEEECCCHHHCCCCCCHHHHHH ALLTEVGRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKGGVLTAALNEPGAALP HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEECCCCCCCC DRPATSFVGGRLSGTKVGVGYAEQADWMLVTADNAVVVVSPTADGVRMVRTPTSNGSDEY CCCCHHHHCCCCCCCEECCCCCCCCCEEEEEECCEEEEEECCCCCEEEEECCCCCCCCCE VMTMDGVAVADCDILADVAAHRVNQLALAVMGAYADGLVAGALRLTADYVANRKQFGKPL EEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH STFQTVAAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWVTSQAPPAMQLCH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHH HLHGGMGMDVTYPMHRYYSTIKDLTRLLGGPSHRLELLGARCSLT HHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCC >Mature Secondary Structure PGCSLMDFDPTAEQQAVADVVTSVLERDISWEALVCGGVTALPVPERLGGDGVGLFEVG CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCEEECCCHHHCCCCCCHHHHHH ALLTEVGRHGAVTPALATLGLGVVPLLELASAEQQDRFLAGVAKGGVLTAALNEPGAALP HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEECCCCCCCC DRPATSFVGGRLSGTKVGVGYAEQADWMLVTADNAVVVVSPTADGVRMVRTPTSNGSDEY CCCCHHHHCCCCCCCEECCCCCCCCCEEEEEECCEEEEEECCCCCEEEEECCCCCCCCCE VMTMDGVAVADCDILADVAAHRVNQLALAVMGAYADGLVAGALRLTADYVANRKQFGKPL EEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH STFQTVAAQLAEVYIASRTIDLVAKSVIWRLAEDLDAGDDLGVLGYWVTSQAPPAMQLCH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHH HLHGGMGMDVTYPMHRYYSTIKDLTRLLGGPSHRLELLGARCSLT HHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA