| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is otsA [H]
Identifier: 148824697
GI number: 148824697
Start: 3920589
End: 3922091
Strand: Direct
Name: otsA [H]
Synonym: TBFG_13524
Alternate gene names: 148824697
Gene position: 3920589-3922091 (Clockwise)
Preceding gene: 148824696
Following gene: 148824698
Centisome position: 88.61
GC content: 65.6
Gene sequence:
>1503_bases ATGGCTCCCTCGGGAGGCCAGGAGGCGCAGATTTGCGATTCGGAGACCTTCGGGGACTCTGACTTCGTGGTGGTAGCCAA TCGACTGCCCGTCGATCTGGAGCGTCTTCCCGACGGCAGCACAACCTGGAAACGCAGCCCCGGAGGCTTGGTCACCGCCT TGGAGCCGGTGCTGCGGCGTCGGCGCGGGGCCTGGGTCGGCTGGCCCGGCGTTAACGACGACGGGGCCGAACCCGACCTC CACGTGCTGGACGGCCCCATCATCCAAGACGAGCTGGAACTTCATCCGGTACGGCTGAGCACCACGGACATAGCTCAGTA CTACGAGGGATTCTCCAACGCCACACTGTGGCCGCTGTACCACGACGTCATCGTCAAGCCGCTCTACCACCGCGAATGGT GGGATCGCTACGTCGACGTCAACCAGCGCTTTGCCGAGGCCGCGTCGCGCGCCGCCGCCCACGGCGCAACCGTGTGGGTA CAGGACTACCAGCTGCAGCTGGTACCGAAGATGCTGCGCATGCTGCGGCCCGATCTGACCATCGGTTTCTTTTTGCACAT CCCGTTCCCGCCGGTAGAGCTGTTTATGCAGATGCCGTGGCGCACCGAGATCATCCAGGGCCTACTGGGCGCCGACCTGG TGGGCTTCCATCTTCCGGGCGGTGCCCAGAATTTCCTGATCCTGTCCCGGCGTCTGGTCGGCACCGACACTTCCCGCGGA ACCGTCGGTGTGCGGTCGCGGTTCGGTGCGGCGGTGCTCGGGTCCCGCACCATACGAGTTGGCGCCTTTCCTATCTCGGT TGACTCCGGCGCGCTCGACCACGCTGCCCGCGACCGCAACATCAGGCGCCGGGCCCGCGAGATTCGCACCGAACTGGGAA ATCCGCGCAAGATCCTGCTCGGTGTTGACCGGCTCGACTACACCAAGGGCATCGACGTACGGCTGAAGGCCTTTTCCGAG CTGCTGGCCGAGGGCCGCGTCAAACGCGACGACACCGTCGTGGTCCAGCTGGCTACCCCGAGCCGCGAGCGGGTGGAGAG CTACCAGACGCTGCGCAACGACATCGAACGCCAGGTCGGCCACATTAACGGCGAGTACGGTGAGGTTGGCCATCCGGTAG TGCATTACCTGCATCGACCGGCTCCGCGCGACGAGCTTATCGCTTTCTTCGTGGCCAGCGACGTCATGCTGGTCACCCCA CTACGCGACGGGATGAACCTGGTGGCCAAGGAGTACGTCGCTTGCCGCAGCGATCTTGGCGGTGCCCTGGTGCTCAGCGA ATTCACCGGGGCCGCAGCCGAACTCCGGCACGCATACCTGGTCAACCCGCACGACCTGGAAGGCGTCAAGGACGGGATAG AGGAAGCGCTCAACCAGACGGAGGAGGCGGGCCGGCGGCGAATGCGGTCGCTGCGACGCCAAGTGCTCGCCCACGACGTG GACCGCTGGGCACAGTCGTTTCTCGACGCTCTCGCCGGGGCACACCCGAGGGGCCAAGGCTAA
Upstream 100 bases:
>100_bases GCCAGGCCAGGCGAGTCGTCGCCGCATATGCGAACGACGCCGACGAGTGTCGGATCTTCCTGTCCATGCTCGGTATTGGA CCGGCCAAACTCGAGAGCTA
Downstream 100 bases:
>100_bases CGGTCAAGCCGCTCCCGCTCGCGAGCAGACGCAGAATCGCCCATTTCGGCACGAAATTGGGCGATTCTGCGTCTGCTCGC GCCCTGGAAGCTGGTGCGGC
Product: alpha, alpha-trehalose-phosphate synthase [UDP-forming] otsA
Products: UDP; alpha,alpha'-Trehalose 6-phosphate
Alternate protein names: TPS; Trehalose-6-phosphate synthase [H]
Number of amino acids: Translated: 500; Mature: 499
Protein sequence:
>500_residues MAPSGGQEAQICDSETFGDSDFVVVANRLPVDLERLPDGSTTWKRSPGGLVTALEPVLRRRRGAWVGWPGVNDDGAEPDL HVLDGPIIQDELELHPVRLSTTDIAQYYEGFSNATLWPLYHDVIVKPLYHREWWDRYVDVNQRFAEAASRAAAHGATVWV QDYQLQLVPKMLRMLRPDLTIGFFLHIPFPPVELFMQMPWRTEIIQGLLGADLVGFHLPGGAQNFLILSRRLVGTDTSRG TVGVRSRFGAAVLGSRTIRVGAFPISVDSGALDHAARDRNIRRRAREIRTELGNPRKILLGVDRLDYTKGIDVRLKAFSE LLAEGRVKRDDTVVVQLATPSRERVESYQTLRNDIERQVGHINGEYGEVGHPVVHYLHRPAPRDELIAFFVASDVMLVTP LRDGMNLVAKEYVACRSDLGGALVLSEFTGAAAELRHAYLVNPHDLEGVKDGIEEALNQTEEAGRRRMRSLRRQVLAHDV DRWAQSFLDALAGAHPRGQG
Sequences:
>Translated_500_residues MAPSGGQEAQICDSETFGDSDFVVVANRLPVDLERLPDGSTTWKRSPGGLVTALEPVLRRRRGAWVGWPGVNDDGAEPDL HVLDGPIIQDELELHPVRLSTTDIAQYYEGFSNATLWPLYHDVIVKPLYHREWWDRYVDVNQRFAEAASRAAAHGATVWV QDYQLQLVPKMLRMLRPDLTIGFFLHIPFPPVELFMQMPWRTEIIQGLLGADLVGFHLPGGAQNFLILSRRLVGTDTSRG TVGVRSRFGAAVLGSRTIRVGAFPISVDSGALDHAARDRNIRRRAREIRTELGNPRKILLGVDRLDYTKGIDVRLKAFSE LLAEGRVKRDDTVVVQLATPSRERVESYQTLRNDIERQVGHINGEYGEVGHPVVHYLHRPAPRDELIAFFVASDVMLVTP LRDGMNLVAKEYVACRSDLGGALVLSEFTGAAAELRHAYLVNPHDLEGVKDGIEEALNQTEEAGRRRMRSLRRQVLAHDV DRWAQSFLDALAGAHPRGQG >Mature_499_residues APSGGQEAQICDSETFGDSDFVVVANRLPVDLERLPDGSTTWKRSPGGLVTALEPVLRRRRGAWVGWPGVNDDGAEPDLH VLDGPIIQDELELHPVRLSTTDIAQYYEGFSNATLWPLYHDVIVKPLYHREWWDRYVDVNQRFAEAASRAAAHGATVWVQ DYQLQLVPKMLRMLRPDLTIGFFLHIPFPPVELFMQMPWRTEIIQGLLGADLVGFHLPGGAQNFLILSRRLVGTDTSRGT VGVRSRFGAAVLGSRTIRVGAFPISVDSGALDHAARDRNIRRRAREIRTELGNPRKILLGVDRLDYTKGIDVRLKAFSEL LAEGRVKRDDTVVVQLATPSRERVESYQTLRNDIERQVGHINGEYGEVGHPVVHYLHRPAPRDELIAFFVASDVMLVTPL RDGMNLVAKEYVACRSDLGGALVLSEFTGAAAELRHAYLVNPHDLEGVKDGIEEALNQTEEAGRRRMRSLRRQVLAHDVD RWAQSFLDALAGAHPRGQG
Specific function: Catalyzes the transfer of glucose from a nucleoside diphosphate-glucose to glucose-6-phosphate to form trehalose-6- phosphate and nucleoside diphosphate [H]
COG id: COG0380
COG function: function code G; Trehalose-6-phosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 20 family [H]
Homologues:
Organism=Escherichia coli, GI1788206, Length=480, Percent_Identity=33.3333333333333, Blast_Score=233, Evalue=2e-62, Organism=Caenorhabditis elegans, GI115533560, Length=547, Percent_Identity=27.2394881170018, Blast_Score=189, Evalue=3e-48, Organism=Caenorhabditis elegans, GI115533558, Length=547, Percent_Identity=27.2394881170018, Blast_Score=189, Evalue=4e-48, Organism=Caenorhabditis elegans, GI71987012, Length=559, Percent_Identity=26.1180679785331, Blast_Score=164, Evalue=1e-40, Organism=Saccharomyces cerevisiae, GI6319602, Length=477, Percent_Identity=36.4779874213836, Blast_Score=313, Evalue=5e-86, Organism=Saccharomyces cerevisiae, GI6323537, Length=446, Percent_Identity=28.6995515695067, Blast_Score=194, Evalue=3e-50, Organism=Saccharomyces cerevisiae, GI6320279, Length=488, Percent_Identity=30.1229508196721, Blast_Score=192, Evalue=2e-49, Organism=Saccharomyces cerevisiae, GI6323917, Length=454, Percent_Identity=28.1938325991189, Blast_Score=190, Evalue=5e-49, Organism=Drosophila melanogaster, GI19920676, Length=497, Percent_Identity=35.2112676056338, Blast_Score=278, Evalue=6e-75,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001830 [H]
Pfam domain/function: PF00982 Glyco_transf_20 [H]
EC number: 2.4.1.15
Molecular weight: Translated: 55863; Mature: 55732
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPSGGQEAQICDSETFGDSDFVVVANRLPVDLERLPDGSTTWKRSPGGLVTALEPVLRR CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHH RRGAWVGWPGVNDDGAEPDLHVLDGPIIQDELELHPVRLSTTDIAQYYEGFSNATLWPLY HCCCEEECCCCCCCCCCCCCEEECCCCCCCCCCEEEEEECHHHHHHHHHCCCCCEEHHHH HDVIVKPLYHREWWDRYVDVNQRFAEAASRAAAHGATVWVQDYQLQLVPKMLRMLRPDLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHCCCCE IGFFLHIPFPPVELFMQMPWRTEIIQGLLGADLVGFHLPGGAQNFLILSRRLVGTDTSRG EEEEEECCCCHHHHHHHCCCHHHHHHHHHCCCHHEEECCCCCCCHHHHHHHHHCCCCCCC TVGVRSRFGAAVLGSRTIRVGAFPISVDSGALDHAARDRNIRRRAREIRTELGNPRKILL CCCHHHHCCHHHHCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEE GVDRLDYTKGIDVRLKAFSELLAEGRVKRDDTVVVQLATPSRERVESYQTLRNDIERQVG ECCHHCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHC HINGEYGEVGHPVVHYLHRPAPRDELIAFFVASDVMLVTPLRDGMNLVAKEYVACRSDLG CCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHCCC GALVLSEFTGAAAELRHAYLVNPHDLEGVKDGIEEALNQTEEAGRRRMRSLRRQVLAHDV CEEEEHHHCCHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DRWAQSFLDALAGAHPRGQG HHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure APSGGQEAQICDSETFGDSDFVVVANRLPVDLERLPDGSTTWKRSPGGLVTALEPVLRR CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHH RRGAWVGWPGVNDDGAEPDLHVLDGPIIQDELELHPVRLSTTDIAQYYEGFSNATLWPLY HCCCEEECCCCCCCCCCCCCEEECCCCCCCCCCEEEEEECHHHHHHHHHCCCCCEEHHHH HDVIVKPLYHREWWDRYVDVNQRFAEAASRAAAHGATVWVQDYQLQLVPKMLRMLRPDLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHCCCCE IGFFLHIPFPPVELFMQMPWRTEIIQGLLGADLVGFHLPGGAQNFLILSRRLVGTDTSRG EEEEEECCCCHHHHHHHCCCHHHHHHHHHCCCHHEEECCCCCCCHHHHHHHHHCCCCCCC TVGVRSRFGAAVLGSRTIRVGAFPISVDSGALDHAARDRNIRRRAREIRTELGNPRKILL CCCHHHHCCHHHHCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEE GVDRLDYTKGIDVRLKAFSELLAEGRVKRDDTVVVQLATPSRERVESYQTLRNDIERQVG ECCHHCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHC HINGEYGEVGHPVVHYLHRPAPRDELIAFFVASDVMLVTPLRDGMNLVAKEYVACRSDLG CCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHCCC GALVLSEFTGAAAELRHAYLVNPHDLEGVKDGIEEALNQTEEAGRRRMRSLRRQVLAHDV CEEEEHHHCCHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DRWAQSFLDALAGAHPRGQG HHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Monovalent cations [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: UDP-glucose; D-glucose 6-phosphate
Specific reaction: UDP-glucose + D-glucose 6-phosphate = UDP + alpha,alpha-trehalose 6-phosphate
General reaction: Hexosyl group transfer [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]