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The map label for this gene is lprE [H]

Identifier: 148824691

GI number: 148824691

Start: 3914503

End: 3915165

Strand: Reverse

Name: lprE [H]

Synonym: TBFG_13518

Alternate gene names: 148824691

Gene position: 3915165-3914503 (Counterclockwise)

Preceding gene: 148824693

Following gene: 148824690

Centisome position: 88.49

GC content: 66.82

Gene sequence:

>663_bases
GTGTCTGACGAGATTGACCCCGACTGGCCTGCGCCGGCATACCAGCCGTCCGATGACGTCGATACCACTCCGCCCGCCCC
AGGCGGGTCTTGGCCCACCGCCTGGCTGGTGGCGCTCGTGGTCCTGGCCTGTGTGGCTGCCGCGGTCGTTGCGTACGCCG
GTATGCATCGGGTCCGACCAGGTGCCAACCAGGCGGCGCCGGCAACGACGTCCGCACCGGCGCGCCCCACTTCCCCGGCA
TCCCAGGTTGGCCCGTGTGGGCCGGACGAGGCAACGGCCGTGCGCGCCGCGCTGGCCCAGCTTGCCCCCGATTCCAAAAC
CGGCAGGCCGTGGAATAGTACGCCGGAGGACAGCAACTACGACCCGTGCGCGGACCTGTCCGCGGTGCTGGTGACGGTGC
AAGACGCCACCAACAGCTCCCCGGACCAGGCGCTGATGTTTCATCGGGGAACGTTCGTCGGAACCGCAACGCCGAGGGCC
TACCCGTTCACCAATTTGATCGGTCCGGCATCCACAAACGACATCGTGGTGCTGAGCTATCGGACACGTCAAAGCTGTGA
CGGCTGCCAAGATGGCATCTTGACGATTGTGGGGTTTGCGTGGCGCGGCGACCACGTGCAGATCCTCGATTCGCTACCGG
AGTTGTTCGATGCGCCGCCGTAG

Upstream 100 bases:

>100_bases
CCCGCTTGTTTCCGCTACCTGCACGTTCTGGCTACAATTCGGCAAGCTCGGCAAGTATCGCACAGCCAGCGGGCGGGTAC
CGGGAGGGTTAGCGGGTTAG

Downstream 100 bases:

>100_bases
TCCGCGAGGAGCGGCACCGCAGCTGATCCTTACCGACTGTTGAATGGAGCACGACGTGGCGACTTCGCCGCCGGCAGGAT
GGTATACCGATCCTGACGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MSDEIDPDWPAPAYQPSDDVDTTPPAPGGSWPTAWLVALVVLACVAAAVVAYAGMHRVRPGANQAAPATTSAPARPTSPA
SQVGPCGPDEATAVRAALAQLAPDSKTGRPWNSTPEDSNYDPCADLSAVLVTVQDATNSSPDQALMFHRGTFVGTATPRA
YPFTNLIGPASTNDIVVLSYRTRQSCDGCQDGILTIVGFAWRGDHVQILDSLPELFDAPP

Sequences:

>Translated_220_residues
MSDEIDPDWPAPAYQPSDDVDTTPPAPGGSWPTAWLVALVVLACVAAAVVAYAGMHRVRPGANQAAPATTSAPARPTSPA
SQVGPCGPDEATAVRAALAQLAPDSKTGRPWNSTPEDSNYDPCADLSAVLVTVQDATNSSPDQALMFHRGTFVGTATPRA
YPFTNLIGPASTNDIVVLSYRTRQSCDGCQDGILTIVGFAWRGDHVQILDSLPELFDAPP
>Mature_219_residues
SDEIDPDWPAPAYQPSDDVDTTPPAPGGSWPTAWLVALVVLACVAAAVVAYAGMHRVRPGANQAAPATTSAPARPTSPAS
QVGPCGPDEATAVRAALAQLAPDSKTGRPWNSTPEDSNYDPCADLSAVLVTVQDATNSSPDQALMFHRGTFVGTATPRAY
PFTNLIGPASTNDIVVLSYRTRQSCDGCQDGILTIVGFAWRGDHVQILDSLPELFDAPP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22983; Mature: 22851

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDEIDPDWPAPAYQPSDDVDTTPPAPGGSWPTAWLVALVVLACVAAAVVAYAGMHRVRP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GANQAAPATTSAPARPTSPASQVGPCGPDEATAVRAALAQLAPDSKTGRPWNSTPEDSNY
CCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
DPCADLSAVLVTVQDATNSSPDQALMFHRGTFVGTATPRAYPFTNLIGPASTNDIVVLSY
CCHHCCEEEEEEEECCCCCCCCCEEEEECCEEEECCCCCCCCHHHCCCCCCCCCEEEEEE
RTRQSCDGCQDGILTIVGFAWRGDHVQILDSLPELFDAPP
CCCCCCCHHHHHHEEHHHHHCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SDEIDPDWPAPAYQPSDDVDTTPPAPGGSWPTAWLVALVVLACVAAAVVAYAGMHRVRP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GANQAAPATTSAPARPTSPASQVGPCGPDEATAVRAALAQLAPDSKTGRPWNSTPEDSNY
CCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
DPCADLSAVLVTVQDATNSSPDQALMFHRGTFVGTATPRAYPFTNLIGPASTNDIVVLSY
CCHHCCEEEEEEEECCCCCCCCCEEEEECCEEEECCCCCCCCHHHCCCCCCCCCEEEEEE
RTRQSCDGCQDGILTIVGFAWRGDHVQILDSLPELFDAPP
CCCCCCCHHHHHHEEHHHHHCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]