Click here to switch to the map view.

The map label for this gene is 148824601

Identifier: 148824601

GI number: 148824601

Start: 3820559

End: 3822142

Strand: Reverse

Name: 148824601

Synonym: TBFG_13428

Alternate gene names: NA

Gene position: 3822142-3820559 (Counterclockwise)

Preceding gene: 148824603

Following gene: 148824599

Centisome position: 86.39

GC content: 72.79

Gene sequence:

>1584_bases
GTGATGGCCTCCGCTCGCGTGCTGGCGATCTGGTGTATGGACTGGCCCGCGGTCGCGGCGGCCGCGGCCGCGGGCCTATC
CGCGACGGCCCCGGTCGCGGTCACGTTGGCAAACCGGGTGATCGCCTGCTCGGCGACCGCGCGGGCGGCCGGGGTGCGCC
GAGGGTTGCGGCGTCGGGAGGCGGCGGCGCGGTGTCCGCAACTGTTTATAGCGACTGCCGACGCCGACCGCGACGCCCGG
CTCTTCGAAGGGGTGATCGCGGCGGTAGACGATCTGGTGCCCCGCGCCGAGCTGCTGCGGCCCGGGCTCCTGGTGTTGCC
GGTGCGCGGGCCGGCCCGTTTTTTCGGGTCCGAGCAGATGGCGGCCGAGCGGCTGATCGACGCGGTGGCCGCGGCCGGCG
CGGAGTGTCAGGTCGGAATCGCCGACCGGTTGTCTACCGCGGTTTTCGCCGCGCGTGCTGGCCGCATCGTGGAGCCGGGA
GGCGATGCGCGGTTTCTGTCGCTGCTGTCGATCCGCCAACTTGCCACCGAGCCGAGCCTGTCCGGGCCGGGCCGGGACGA
CCTGACGGATCTGTTGTGGAGGATGGGGATTCGCACCATCGGACAGTTCGCCGCGCTGTCTCGTACCGACGTGGCGTCCA
GGTTCGGTGCCGACGCGGTGGCCGCGCACCGGTTCGCCCGCGGCGAACCGGAACGGGCGCCCTGCGGGCGGGAGCCGCCG
CCGGATCTGGCCGCCGAGCTGGCATGCGATCCGCCGATCGACCGGGTCGACGCCGCGGCGTTCGCCGGGCGCTCGCTGGC
CGCCGAGCTGCATCGGGCGCTGATGGCCGCCGGAGTGGGCTGCACCCGGCTGGCCATTCATGCCGTCACCGCCAACGGCG
AAGAGCGCAGCCGGGTGTGGCGGTGCGCCGAGCCGCTGACCGAGGACGCCACCGCCGACCGGGTGCGCTGGCAACTGGAC
GGGTGGTTGAACAACCGGAATGCTCGTGACCGGCCCACCGCGGCGGTGACTCTGCTGCGGCTGCAGGCGGTGGAGACGGT
GTCCGCATCGGAAGGCTTGCAGTTGCCGCTATGGGGCGGGCTCGGTGAACAGGACAGGCTTCGGGCCCGTCGGGCGCTGG
TGCGGGTGCAGGGCTTGCTCGGTCCGGAGGCCGTGCGGGTGCCGGTGCTATCCGGCGGACACGGCCCGGCCGAACGCATC
ACGTTGACCGTGCTGGGCCTAGTAGCCCCTGAGCCGGTGCCGCAGGCCGACCCCGGTCAGCCGTGGCCCGGCAGGTTGCC
CGACCCGTCGCCGGCGGTGCTGTTCGACGATCCGGTGGACTTGCTTGACGCCCAAGGAAACCCGATACGGGTGACCAGCC
GGGGGATGTTCTCCGCGGACCCGGCGCGGCTGAGGGTTCGTGGCCGAGACGATCGGCTGCGCTGGTGGGCCGGACCGTGG
CCGGACGACGAGCGGTGGTGGGATCCGGATCGGGCGAGTGGCCGCACCGCGCGCGCTCAGGTATTGCTGGACGGCGATCC
CGGCACCGCGTTGCTGCTGTGCTACCGGCAGCGGCGGTGGTATCTGGAGGGAAGCTACGAATGA

Upstream 100 bases:

>100_bases
GGGTCTGCGGCTATGAGATCACCCCGGCCCTCAGGGGCGTGCCCACCCCGGGGTTGGGGCGGATCAGTGGGGTGCGGCTG
CAGATCAACGGGCGTGGACG

Downstream 100 bases:

>100_bases
CTTGCGCCGAACGTGACGTCAGGGCGAGAATTTCGGGAAAATCCCGCCGTCAGTTCACGTTCGGCGCGCGAATCGTCCGA
TCCGTTCGACGAACCGGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: DNA-Directed DNA Polymerase; DNA-Repair Protein; DNA Polymerase; UMUC Domain-Containing Protein DNA-Repair Protein; DNA Repair Polymerase; UMUC Domain Protein DNA-Repair Protein; DNA Repair Nucleotidyltransferase/DNA Polymerase

Number of amino acids: Translated: 527; Mature: 527

Protein sequence:

>527_residues
MMASARVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRREAAARCPQLFIATADADRDAR
LFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQMAAERLIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPG
GDARFLSLLSIRQLATEPSLSGPGRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPP
PDLAAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVWRCAEPLTEDATADRVRWQLD
GWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGGLGEQDRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERI
TLTVLGLVAPEPVPQADPGQPWPGRLPDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPW
PDDERWWDPDRASGRTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE

Sequences:

>Translated_527_residues
MMASARVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRREAAARCPQLFIATADADRDAR
LFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQMAAERLIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPG
GDARFLSLLSIRQLATEPSLSGPGRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPP
PDLAAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVWRCAEPLTEDATADRVRWQLD
GWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGGLGEQDRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERI
TLTVLGLVAPEPVPQADPGQPWPGRLPDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPW
PDDERWWDPDRASGRTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE
>Mature_527_residues
MMASARVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRREAAARCPQLFIATADADRDAR
LFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQMAAERLIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPG
GDARFLSLLSIRQLATEPSLSGPGRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPP
PDLAAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVWRCAEPLTEDATADRVRWQLD
GWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGGLGEQDRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERI
TLTVLGLVAPEPVPQADPGQPWPGRLPDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPW
PDDERWWDPDRASGRTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE

Specific function: Unknown

COG id: COG0389

COG function: function code L; Nucleotidyltransferase/DNA polymerase involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56667; Mature: 56667

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: PS50173 UMUC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMASARVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRRE
CCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCEEECCCEEEECCHHHHHHHHHHHHHHH
AAARCPQLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQM
HHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHCCCEEEEECCCHHHHCCCHHH
AAERLIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSL
HHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHCCCCC
SGPGRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCC
PDLAAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVW
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEECCCHHHHHHH
RCAEPLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGG
HHHCCCCCCCCHHHEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCC
LGEQDRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQ
CCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHEEEEEEEHCCCCCCCCCCCCC
PWPGRLPDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPW
CCCCCCCCCCCCEEECCCHHHHCCCCCEEEEEECCCCCCCCCEEEEECCCCCEEEECCCC
PDDERWWDPDRASGRTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE
CCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCEEECCCCC
>Mature Secondary Structure
MMASARVLAIWCMDWPAVAAAAAAGLSATAPVAVTLANRVIACSATARAAGVRRGLRRRE
CCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCEEECCCEEEECCHHHHHHHHHHHHHHH
AAARCPQLFIATADADRDARLFEGVIAAVDDLVPRAELLRPGLLVLPVRGPARFFGSEQM
HHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHCCCEEEEECCCHHHHCCCHHH
AAERLIDAVAAAGAECQVGIADRLSTAVFAARAGRIVEPGGDARFLSLLSIRQLATEPSL
HHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHCCCCC
SGPGRDDLTDLLWRMGIRTIGQFAALSRTDVASRFGADAVAAHRFARGEPERAPCGREPP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCC
PDLAAELACDPPIDRVDAAAFAGRSLAAELHRALMAAGVGCTRLAIHAVTANGEERSRVW
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEECCCHHHHHHH
RCAEPLTEDATADRVRWQLDGWLNNRNARDRPTAAVTLLRLQAVETVSASEGLQLPLWGG
HHHCCCCCCCCHHHEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCC
LGEQDRLRARRALVRVQGLLGPEAVRVPVLSGGHGPAERITLTVLGLVAPEPVPQADPGQ
CCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHEEEEEEEHCCCCCCCCCCCCC
PWPGRLPDPSPAVLFDDPVDLLDAQGNPIRVTSRGMFSADPARLRVRGRDDRLRWWAGPW
CCCCCCCCCCCCEEECCCHHHHCCCCCEEEEEECCCCCCCCCEEEEECCCCCEEEECCCC
PDDERWWDPDRASGRTARAQVLLDGDPGTALLLCYRQRRWYLEGSYE
CCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA