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The map label for this gene is ynjA [H]

Identifier: 148824532

GI number: 148824532

Start: 3724259

End: 3725788

Strand: Direct

Name: ynjA [H]

Synonym: TBFG_13359

Alternate gene names: 148824532

Gene position: 3724259-3725788 (Clockwise)

Preceding gene: 148824523

Following gene: 148824534

Centisome position: 84.17

GC content: 66.67

Gene sequence:

>1530_bases
ATGTCGGCGCGTCTGGAGCGTGACCTACTGGCGGCCGGCCAGCAGGTGGTGCGGGTACCCACCAAGCTGATGGCCCAGAC
CCGCAAGTCGGCGCGCAGTCGGGGCAAGTCGGATCCGATCGATGCGCTGGCGGTGGCGCGGGCGGTGCTGCGTGAAACCG
ACCTACCCCTGGCCACCCACGACGAGACGTCGCGGGAGTTGAAGTTGTTGACTGACCGTCGAGATGTCCTTGTGGCCCAA
CGCACGTCGGCGATCAACCGGTTGCGCTGGCTCGTCCATGAACTCGATCCCGAGCGGGCACCGGCAGCACGCTCGCTCGA
TGCCGCCAAGCACCAGCAGGCCCTGCGGACCTGGCTGGACACCCAGCCAGGATTGGTCGCCGAACTCGCGCGCGCCGAGC
TGACCGACATCATCCGGCTCACCGGCGAGATCAACACCCTAGCCCAGCGCATCAGCGCCCGAGTCCACCAGGTCGCCCCC
GCACTGCTGGAAATCCCTGGCTGCGCGGAGCTGACTGCAGCCAAAATCGTCGGCGAAGCCGCCGGAGTGACCCGGTTCAA
AAGCGAAGCCGCCTTCGCCTGCCATGCCGCAGTGGCTCCCATCCCGGTGTGGTCGGGCAACACCGCCGGCCAGATGCGGC
TCAGCCGCTCGGGCAACCGCCAGCTCAACGCCGCCCTACACCGCATCGCACTGACCCAAATCCGGATGACCGACAGCCGG
GGCCAGGCCTACTACCAAAGGCTGCAAGACGCCGGGAAAACCAAACGCGCAGCACTACGCTGCCTCAAACGCCGCCTAGC
CCGCACCGTCTTCCAGGCCCTGCGCACCGTCCACCAGCCCAGCTCCGAACACACCCAACCCGCGGCCGCTTGCCATAGGA
GCTATTGCTCGTCACACCTCGGCGAGCCACCTCGTCTAACGGATATGACACAGAAAACCCGCATCCAGCCCCTACCTCCC
AAGCGAGCCGGCCTGTTGATCCGCGCACTGTATCGGATCGCCAAGCGGCGCTTCGGCGAAGTTCCCGAGCCGTTCACGGT
CACCGCACATCATCGGCGGCTGCTGATCGCCAATGTGGTGCACGAAGCCCTGCTGCAGCGAGCGTCGCGGAAGCTACCGC
CCAGCGTCCGTGAGCTGGCGGTGTTTTGGACCGCCCGCAGCATCGGCTGCTCGTGGTGCGTGGACTTCGGAGCCATGCTG
CAGCGCCTGGACGGGCTGGACGTGGACAGGCTCACGGACATCGACAATTACGCCACCTCATCGAAATTCAGCGACGACGA
ACGCGCCGCCATCGCCTACGCCGAGGCGATGACCGCAGACCCGCATTCGGTGACCGACGAGCAGGTGGCCGACCTGCGGG
CCCGCTTCGGCGAGGCCGGCGTGATCGAGCTGACTTACCAGATCGGCGTGGAGAACATGCGAGCCCGGATGAATTCGGCG
CTGGGCATCACCGAGCAAGGCTTCAATTCCGGTGATGCCTGCCGCGTCCCGTGGGCTGCGCCCGACGTTCCTTCAGCGGA
GAGCCGGTGA

Upstream 100 bases:

>100_bases
GACCGTCAAGGCCACCACGGCCGGGCACGCCACAGCCATCATGTGGGCCCGTGAACAGTTCGGCCTCGAGCTGATCTGAG
GCATCGAGGACTGCCGCAAC

Downstream 100 bases:

>100_bases
ACTTGTCGGGATTGGCGATATCCCACAGCGCGCACACCTTTCCGTCGCGCACGGTTATCGCGGTGATCCGCGGCGCCATC
GCCCGATACCCGTCGACCCC

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 509; Mature: 508

Protein sequence:

>509_residues
MSARLERDLLAAGQQVVRVPTKLMAQTRKSARSRGKSDPIDALAVARAVLRETDLPLATHDETSRELKLLTDRRDVLVAQ
RTSAINRLRWLVHELDPERAPAARSLDAAKHQQALRTWLDTQPGLVAELARAELTDIIRLTGEINTLAQRISARVHQVAP
ALLEIPGCAELTAAKIVGEAAGVTRFKSEAAFACHAAVAPIPVWSGNTAGQMRLSRSGNRQLNAALHRIALTQIRMTDSR
GQAYYQRLQDAGKTKRAALRCLKRRLARTVFQALRTVHQPSSEHTQPAAACHRSYCSSHLGEPPRLTDMTQKTRIQPLPP
KRAGLLIRALYRIAKRRFGEVPEPFTVTAHHRRLLIANVVHEALLQRASRKLPPSVRELAVFWTARSIGCSWCVDFGAML
QRLDGLDVDRLTDIDNYATSSKFSDDERAAIAYAEAMTADPHSVTDEQVADLRARFGEAGVIELTYQIGVENMRARMNSA
LGITEQGFNSGDACRVPWAAPDVPSAESR

Sequences:

>Translated_509_residues
MSARLERDLLAAGQQVVRVPTKLMAQTRKSARSRGKSDPIDALAVARAVLRETDLPLATHDETSRELKLLTDRRDVLVAQ
RTSAINRLRWLVHELDPERAPAARSLDAAKHQQALRTWLDTQPGLVAELARAELTDIIRLTGEINTLAQRISARVHQVAP
ALLEIPGCAELTAAKIVGEAAGVTRFKSEAAFACHAAVAPIPVWSGNTAGQMRLSRSGNRQLNAALHRIALTQIRMTDSR
GQAYYQRLQDAGKTKRAALRCLKRRLARTVFQALRTVHQPSSEHTQPAAACHRSYCSSHLGEPPRLTDMTQKTRIQPLPP
KRAGLLIRALYRIAKRRFGEVPEPFTVTAHHRRLLIANVVHEALLQRASRKLPPSVRELAVFWTARSIGCSWCVDFGAML
QRLDGLDVDRLTDIDNYATSSKFSDDERAAIAYAEAMTADPHSVTDEQVADLRARFGEAGVIELTYQIGVENMRARMNSA
LGITEQGFNSGDACRVPWAAPDVPSAESR
>Mature_508_residues
SARLERDLLAAGQQVVRVPTKLMAQTRKSARSRGKSDPIDALAVARAVLRETDLPLATHDETSRELKLLTDRRDVLVAQR
TSAINRLRWLVHELDPERAPAARSLDAAKHQQALRTWLDTQPGLVAELARAELTDIIRLTGEINTLAQRISARVHQVAPA
LLEIPGCAELTAAKIVGEAAGVTRFKSEAAFACHAAVAPIPVWSGNTAGQMRLSRSGNRQLNAALHRIALTQIRMTDSRG
QAYYQRLQDAGKTKRAALRCLKRRLARTVFQALRTVHQPSSEHTQPAAACHRSYCSSHLGEPPRLTDMTQKTRIQPLPPK
RAGLLIRALYRIAKRRFGEVPEPFTVTAHHRRLLIANVVHEALLQRASRKLPPSVRELAVFWTARSIGCSWCVDFGAMLQ
RLDGLDVDRLTDIDNYATSSKFSDDERAAIAYAEAMTADPHSVTDEQVADLRARFGEAGVIELTYQIGVENMRARMNSAL
GITEQGFNSGDACRVPWAAPDVPSAESR

Specific function: Unknown

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv2313c [H]

Homologues:

Organism=Escherichia coli, GI1788050, Length=181, Percent_Identity=32.5966850828729, Blast_Score=86, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: NA

Molecular weight: Translated: 56232; Mature: 56101

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSARLERDLLAAGQQVVRVPTKLMAQTRKSARSRGKSDPIDALAVARAVLRETDLPLATH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCC
DETSRELKLLTDRRDVLVAQRTSAINRLRWLVHELDPERAPAARSLDAAKHQQALRTWLD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHC
TQPGLVAELARAELTDIIRLTGEINTLAQRISARVHQVAPALLEIPGCAELTAAKIVGEA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
AGVTRFKSEAAFACHAAVAPIPVWSGNTAGQMRLSRSGNRQLNAALHRIALTQIRMTDSR
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCC
GQAYYQRLQDAGKTKRAALRCLKRRLARTVFQALRTVHQPSSEHTQPAAACHRSYCSSHL
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHC
GEPPRLTDMTQKTRIQPLPPKRAGLLIRALYRIAKRRFGEVPEPFTVTAHHRRLLIANVV
CCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHH
HEALLQRASRKLPPSVRELAVFWTARSIGCSWCVDFGAMLQRLDGLDVDRLTDIDNYATS
HHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHCCHHHHCC
SKFSDDERAAIAYAEAMTADPHSVTDEQVADLRARFGEAGVIELTYQIGVENMRARMNSA
CCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEEHHHCHHHHHHHHHHH
LGITEQGFNSGDACRVPWAAPDVPSAESR
CCCCCCCCCCCCCEECCCCCCCCCCCCCC
>Mature Secondary Structure 
SARLERDLLAAGQQVVRVPTKLMAQTRKSARSRGKSDPIDALAVARAVLRETDLPLATH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCC
DETSRELKLLTDRRDVLVAQRTSAINRLRWLVHELDPERAPAARSLDAAKHQQALRTWLD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHC
TQPGLVAELARAELTDIIRLTGEINTLAQRISARVHQVAPALLEIPGCAELTAAKIVGEA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
AGVTRFKSEAAFACHAAVAPIPVWSGNTAGQMRLSRSGNRQLNAALHRIALTQIRMTDSR
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCC
GQAYYQRLQDAGKTKRAALRCLKRRLARTVFQALRTVHQPSSEHTQPAAACHRSYCSSHL
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHC
GEPPRLTDMTQKTRIQPLPPKRAGLLIRALYRIAKRRFGEVPEPFTVTAHHRRLLIANVV
CCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHH
HEALLQRASRKLPPSVRELAVFWTARSIGCSWCVDFGAMLQRLDGLDVDRLTDIDNYATS
HHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHCCHHHHCC
SKFSDDERAAIAYAEAMTADPHSVTDEQVADLRARFGEAGVIELTYQIGVENMRARMNSA
CCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEEHHHCHHHHHHHHHHH
LGITEQGFNSGDACRVPWAAPDVPSAESR
CCCCCCCCCCCCCEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]