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The map label for this gene is 148824443

Identifier: 148824443

GI number: 148824443

Start: 3632388

End: 3633032

Strand: Reverse

Name: 148824443

Synonym: TBFG_13270

Alternate gene names: NA

Gene position: 3633032-3632388 (Counterclockwise)

Preceding gene: 148824444

Following gene: 148824442

Centisome position: 82.11

GC content: 62.95

Gene sequence:

>645_bases
GTGGATTCAGGTCAGGTTCTGGCCGAACCGAAATCAAACGCTGAGATCGTGTTCAAGGGCCGTAATGTCGAGATCCCCGA
CCACTTCCGCATCTACGTTTCGCAGAAACTCGCCCGCTTGGAGCGGTTCGACCGGACCATCTACCTGTTCGACGTCGAAC
TCGACCACGAACGTAATCGCCGCCAGCGCAAGTCCTGTCAGCGCGTGGAGATCACCGCGCGTGGGCGAGGGCCGGTGGTG
CGAGGTGAGGCCTGCGCCGACAGCTTCTATGCCGCGCTTGAATCAGCGGTCGTCAAACTGGAGAGCCGGCTGCGCCGCGG
TAAGGATCGCCGCAAGGTGCACTACGGCGACAAAACCCCGGTTTCGCTGGCCGAGGCGACCGCGGTGGTGCCAGCGCCGG
AGAACGGCTTCAACACCAGACCAGCCGAGGCACACGATCACGACGGTGCCGTCGTCGAGCGGGAGCCTGGGCGGATCGTT
CGCACCAAAGAACACCCGGCCAAGCCGATGTCGGTCGATGACGCGCTCTACCAGATGGAGCTGGTTGGACACGACTTCTT
CTTGTTCTACGACAAGGACACCGAACGGCCGTCGGTGGTCTACCGCCGGCACGCCTACGACTACGGCTTGATCCGTCTGG
CGTGA

Upstream 100 bases:

>100_bases
ACCGCTCCCACCCCGTCGGCGCGTCTCCCCGAAGGCCAGGCACGCAGGGCGCGTGTGACGTGGAAAGAGAAACGAGTTGT
CACGTATGTCAAGGCTAGCC

Downstream 100 bases:

>100_bases
TCGGCGGCGCGCGCCGCGTCGTCACCTACCATGGGAGTCGCCTTATCTAAAGACTCCTACACATGCGGGGACATAGCTGT
GCTGTCGAAGTTGCTGCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MDSGQVLAEPKSNAEIVFKGRNVEIPDHFRIYVSQKLARLERFDRTIYLFDVELDHERNRRQRKSCQRVEITARGRGPVV
RGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDKTPVSLAEATAVVPAPENGFNTRPAEAHDHDGAVVEREPGRIV
RTKEHPAKPMSVDDALYQMELVGHDFFLFYDKDTERPSVVYRRHAYDYGLIRLA

Sequences:

>Translated_214_residues
MDSGQVLAEPKSNAEIVFKGRNVEIPDHFRIYVSQKLARLERFDRTIYLFDVELDHERNRRQRKSCQRVEITARGRGPVV
RGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDKTPVSLAEATAVVPAPENGFNTRPAEAHDHDGAVVEREPGRIV
RTKEHPAKPMSVDDALYQMELVGHDFFLFYDKDTERPSVVYRRHAYDYGLIRLA
>Mature_214_residues
MDSGQVLAEPKSNAEIVFKGRNVEIPDHFRIYVSQKLARLERFDRTIYLFDVELDHERNRRQRKSCQRVEITARGRGPVV
RGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDKTPVSLAEATAVVPAPENGFNTRPAEAHDHDGAVVEREPGRIV
RTKEHPAKPMSVDDALYQMELVGHDFFLFYDKDTERPSVVYRRHAYDYGLIRLA

Specific function: Unknown

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S30Ae family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003489 [H]

Pfam domain/function: PF02482 Ribosomal_S30AE [H]

EC number: NA

Molecular weight: Translated: 24567; Mature: 24567

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSGQVLAEPKSNAEIVFKGRNVEIPDHFRIYVSQKLARLERFDRTIYLFDVELDHERNR
CCCCCEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEEEECCHHHH
RQRKSCQRVEITARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDKTP
HHHHCCCEEEEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCC
VSLAEATAVVPAPENGFNTRPAEAHDHDGAVVEREPGRIVRTKEHPAKPMSVDDALYQME
CCHHHCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCCCCCCCHHHHHHHHE
LVGHDFFLFYDKDTERPSVVYRRHAYDYGLIRLA
EECCEEEEEEECCCCCCCEEEEECCCCCEEEEEC
>Mature Secondary Structure
MDSGQVLAEPKSNAEIVFKGRNVEIPDHFRIYVSQKLARLERFDRTIYLFDVELDHERNR
CCCCCEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEEEECCHHHH
RQRKSCQRVEITARGRGPVVRGEACADSFYAALESAVVKLESRLRRGKDRRKVHYGDKTP
HHHHCCCEEEEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCC
VSLAEATAVVPAPENGFNTRPAEAHDHDGAVVEREPGRIVRTKEHPAKPMSVDDALYQME
CCHHHCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCCCCCCCHHHHHHHHE
LVGHDFFLFYDKDTERPSVVYRRHAYDYGLIRLA
EECCEEEEEEECCCCCCCEEEEECCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA