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The map label for this gene is 148824439

Identifier: 148824439

GI number: 148824439

Start: 3624899

End: 3625381

Strand: Reverse

Name: 148824439

Synonym: TBFG_13266

Alternate gene names: NA

Gene position: 3625381-3624899 (Counterclockwise)

Preceding gene: 148824440

Following gene: 148824438

Centisome position: 81.94

GC content: 65.01

Gene sequence:

>483_bases
ATGGACGTCAAGGAGGTGCTGCTGCCGGGGGTGGGCCTGCGATACGAGTTCACCAGCTATCGCGGTGACCGGATCGGCAT
CGTTGCCAGGCGCAGTGGCGGTTTCGACGTCGTCCTGTATGGCCGCGATGATCCGGACGAAGCCCGACCGGTTTTGCGGC
TCACCGATGAAGAGGCCGAGGCGGTGGCTCAGATTCTGGGTGCGCCGAGGATCGCCGAGCGATTTACCGAGCTGACGCGT
GAGGTGCCCGGGCTTAAGGCCGGTCAGATTCACATCCGGGCGGGTAGCTTGTTTGTGGACCGGCCGCTGGGTGATACCCG
TGCGCGCACCCGTACCGGCGCGTCGATTGTGGCGATCGTGCGTGACGAGGATGTGTTGGCCTCGCCGGGCCCGACTGATG
TGCTGCGAGCCGGAGATGTCCTCATCGTGATCGGCACCGAGGACGGGATCGCCGGGGTCGAACAGATCGTCGAAAAGGGC
TGA

Upstream 100 bases:

>100_bases
GGTGTCGATGTTGTTGCCGTGGCCGCACCGGCATACCTGAGTCAACGAGATTGCCCGTACCGCTTCTATCTTGGCCGCAT
TTCGTCAAGGATTGACTCCT

Downstream 100 bases:

>100_bases
ACCGGTGGAGGTTTCGAGGGCGCTGTTGTTTGAGCTCGGCGTCCTGTTGGCGGTGCTTGCGGTGCTGGGTGCAGTGGCAC
GACGATTCGCGTTGTCGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: TrkA-C Domain Protein; TrkA Domain-Containing Protein; TrkA-C; TrkA Domain Protein; Potassium-Efflux System Protein YhaT; TrkA-C Domain Containing Protein; TrkA-Like Protein

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MDVKEVLLPGVGLRYEFTSYRGDRIGIVARRSGGFDVVLYGRDDPDEARPVLRLTDEEAEAVAQILGAPRIAERFTELTR
EVPGLKAGQIHIRAGSLFVDRPLGDTRARTRTGASIVAIVRDEDVLASPGPTDVLRAGDVLIVIGTEDGIAGVEQIVEKG

Sequences:

>Translated_160_residues
MDVKEVLLPGVGLRYEFTSYRGDRIGIVARRSGGFDVVLYGRDDPDEARPVLRLTDEEAEAVAQILGAPRIAERFTELTR
EVPGLKAGQIHIRAGSLFVDRPLGDTRARTRTGASIVAIVRDEDVLASPGPTDVLRAGDVLIVIGTEDGIAGVEQIVEKG
>Mature_160_residues
MDVKEVLLPGVGLRYEFTSYRGDRIGIVARRSGGFDVVLYGRDDPDEARPVLRLTDEEAEAVAQILGAPRIAERFTELTR
EVPGLKAGQIHIRAGSLFVDRPLGDTRARTRTGASIVAIVRDEDVLASPGPTDVLRAGDVLIVIGTEDGIAGVEQIVEKG

Specific function: Unknown

COG id: COG0490

COG function: function code P; Putative regulatory, ligand-binding protein related to C-terminal domains of K+ channels

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17234; Mature: 17234

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVKEVLLPGVGLRYEFTSYRGDRIGIVARRSGGFDVVLYGRDDPDEARPVLRLTDEEAE
CCHHHHHCCCCCEEEEECCCCCCEEEEEEECCCCEEEEEECCCCCHHCCCEEEECCHHHH
AVAQILGAPRIAERFTELTREVPGLKAGQIHIRAGSLFVDRPLGDTRARTRTGASIVAIV
HHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEECCEEEECCCCCCCHHCCCCCEEEEEE
RDEDVLASPGPTDVLRAGDVLIVIGTEDGIAGVEQIVEKG
ECCCEECCCCCCHHCCCCCEEEEEECCCCHHHHHHHHHCC
>Mature Secondary Structure
MDVKEVLLPGVGLRYEFTSYRGDRIGIVARRSGGFDVVLYGRDDPDEARPVLRLTDEEAE
CCHHHHHCCCCCEEEEECCCCCCEEEEEEECCCCEEEEEECCCCCHHCCCEEEECCHHHH
AVAQILGAPRIAERFTELTREVPGLKAGQIHIRAGSLFVDRPLGDTRARTRTGASIVAIV
HHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEECCEEEECCCCCCCHHCCCCCEEEEEE
RDEDVLASPGPTDVLRAGDVLIVIGTEDGIAGVEQIVEKG
ECCCEECCCCCCHHCCCCCEEEEEECCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA