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The map label for this gene is yoqW [H]

Identifier: 148824428

GI number: 148824428

Start: 3614342

End: 3615100

Strand: Reverse

Name: yoqW [H]

Synonym: TBFG_13255

Alternate gene names: 148824428

Gene position: 3615100-3614342 (Counterclockwise)

Preceding gene: 148824431

Following gene: 148824427

Centisome position: 81.71

GC content: 67.98

Gene sequence:

>759_bases
ATGTGCGGACGGTTTGCGGTCACCACTGATCCGGCCCAGCTGGCCGAGAAAATCACGGCCATAGACGAGGCCACCGGGTG
CGGTGGCGGGAAGACGAGCTACAACGTGGCACCCACCGACACGATCGCGACAGTGGTGTCCCGCCACAGCGAGCCCGACG
ACGAGCCCACCCGCCGGGTGCGGCTCATGCGCTGGGGACTGATTCCGTCGTGGATCAAGGCCGGGCCCGGCGGCGCACCC
GATGCCAAAGGCCCACCGCTGATCAACGCCCGCGCCGATAAGGTCGCCACGTCGCCGGCGTTCCGGAGTGCGGTCAGAAG
TAAGCGTTGCCTGGTGCCGATGGACGGCTGGTACGAATGGCGCGTCGACCCCGACGCCACCCCGGGGAGGCCGAACGCCA
AGACGCCGTTCTTCCTGCACCGCCACGACGGCGCCCTGTTGTTCACGGCCGGGCTGTGGTCGGTTTGGAAGTCTTACAGG
TCCGCCCCACCGCTGCTGAGCTGCACGGTGATCACCACCGATGCCGTGGGCGAGCTGGCCGAGATCCATGACCGGATGCC
GCTGCTGCTGGCCGAAGAGGACTGGGACGACTGGCTGAATCCAGACGCCCCGCCGGATCCTGAGCTGCTGGCCCGCCCGC
CGGATGTGCGCGACATCGCGCTGCGCCAAGTGTCCACGTTGGTCAACAACGTGCGCAACAACGGGCCTGAGCTGTTGGAG
CCGGCCAGGTCGCAGCCCGAGCAGATCCAGCTGCTGTGA

Upstream 100 bases:

>100_bases
TAGCGCGCACCGGCGTCGGCGCCGTTGGGGCTGGCCATGTCTTCACCGCTTCATCCTGCCGTGTCGGCGGGTGTCGTGGG
TACCAGGCACCATAGGAAGC

Downstream 100 bases:

>100_bases
GGGTCTGTGCCCACGCGTGTGACGCTGCGGCGAATCCAAGCGCGATTTCTTGCCGCGCCATTACGCTCGCCGGGCGCTCG
CGGCAGGTTTGCCTGAAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MCGRFAVTTDPAQLAEKITAIDEATGCGGGKTSYNVAPTDTIATVVSRHSEPDDEPTRRVRLMRWGLIPSWIKAGPGGAP
DAKGPPLINARADKVATSPAFRSAVRSKRCLVPMDGWYEWRVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWKSYR
SAPPLLSCTVITTDAVGELAEIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPDVRDIALRQVSTLVNNVRNNGPELLE
PARSQPEQIQLL

Sequences:

>Translated_252_residues
MCGRFAVTTDPAQLAEKITAIDEATGCGGGKTSYNVAPTDTIATVVSRHSEPDDEPTRRVRLMRWGLIPSWIKAGPGGAP
DAKGPPLINARADKVATSPAFRSAVRSKRCLVPMDGWYEWRVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWKSYR
SAPPLLSCTVITTDAVGELAEIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPDVRDIALRQVSTLVNNVRNNGPELLE
PARSQPEQIQLL
>Mature_252_residues
MCGRFAVTTDPAQLAEKITAIDEATGCGGGKTSYNVAPTDTIATVVSRHSEPDDEPTRRVRLMRWGLIPSWIKAGPGGAP
DAKGPPLINARADKVATSPAFRSAVRSKRCLVPMDGWYEWRVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWKSYR
SAPPLLSCTVITTDAVGELAEIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPDVRDIALRQVSTLVNNVRNNGPELLE
PARSQPEQIQLL

Specific function: Unknown

COG id: COG2135

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0361 family [H]

Homologues:

Organism=Homo sapiens, GI54607106, Length=238, Percent_Identity=31.0924369747899, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI54607104, Length=238, Percent_Identity=31.0924369747899, Blast_Score=100, Evalue=2e-21,
Organism=Escherichia coli, GI48994894, Length=248, Percent_Identity=30.241935483871, Blast_Score=87, Evalue=8e-19,
Organism=Saccharomyces cerevisiae, GI6323761, Length=273, Percent_Identity=29.6703296703297, Blast_Score=106, Evalue=3e-24,
Organism=Drosophila melanogaster, GI21355761, Length=230, Percent_Identity=31.304347826087, Blast_Score=92, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003738 [H]

Pfam domain/function: PF02586 DUF159 [H]

EC number: NA

Molecular weight: Translated: 27641; Mature: 27641

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGRFAVTTDPAQLAEKITAIDEATGCGGGKTSYNVAPTDTIATVVSRHSEPDDEPTRRV
CCCCEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHH
RLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVPMDGWYEW
HHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCCCCCEEE
RVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWKSYRSAPPLLSCTVITTDAVGELA
EECCCCCCCCCCCCCCEEEEECCCCEEEHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHH
EIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPDVRDIALRQVSTLVNNVRNNGPELLE
HHHCCCCEEEECCCCHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHH
PARSQPEQIQLL
HHHCCCCEEECC
>Mature Secondary Structure
MCGRFAVTTDPAQLAEKITAIDEATGCGGGKTSYNVAPTDTIATVVSRHSEPDDEPTRRV
CCCCEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHH
RLMRWGLIPSWIKAGPGGAPDAKGPPLINARADKVATSPAFRSAVRSKRCLVPMDGWYEW
HHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCCCCCEEE
RVDPDATPGRPNAKTPFFLHRHDGALLFTAGLWSVWKSYRSAPPLLSCTVITTDAVGELA
EECCCCCCCCCCCCCCEEEEECCCCEEEHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHH
EIHDRMPLLLAEEDWDDWLNPDAPPDPELLARPPDVRDIALRQVSTLVNNVRNNGPELLE
HHHCCCCEEEECCCCHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHH
PARSQPEQIQLL
HHHCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]