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The map label for this gene is pdtaS [H]

Identifier: 148824419

GI number: 148824419

Start: 3607807

End: 3609312

Strand: Reverse

Name: pdtaS [H]

Synonym: TBFG_13246

Alternate gene names: 148824419

Gene position: 3609312-3607807 (Counterclockwise)

Preceding gene: 148824420

Following gene: 148824416

Centisome position: 81.58

GC content: 64.67

Gene sequence:

>1506_bases
ATGTCCACACTCGGTGATCTGCTCGCCGAACACACGGTGCTGCCGGGCAGCGCGGTGGACCACCTGCATGCGGTGGTCGG
GGAGTGGCAGCTCCTTGCCGACTTGTCGTTTGCCGATTACCTGATGTGGGTTCGCCGCGACGACGGTGTCCTGGTGTGCG
TTGCGCAATGCCGGCCGAACACCGGGCCGACGGTGGTGCATACCGACGCGGTAGGCACCGTCGTCGCCGCCAATAGCATG
CCGCTGGTCGCCGCGACCTTCTCCGGTGGTGTCCCGGGACGGGAAGGCGCTGTCGGCCAACATAATTCATGTCAACACGA
CGGCCACAGTGTCGAAGTCTCCCCGGTGCGCTTTGGCGATCAGGTGGTGGCGGTGCTGACACGGCATCAACCCGAACTGG
CGGCGCGACGTAGATCCGGCCACCTGGAGACCGCCTATCGGTTGTGCGCCACAGATCTTCTCCGGATGCTGGCGGAGGGC
ACCTTTCCCGACGCAGGGGACGTGGCGATGTCGCGATCTAGCCCGCGCGCGGGTGACGGCTTCATCCGTCTCGATGTCGA
CGGTGTGGTCTCTTACGCCAGCCCCAATGCCCTATCGGCTTACCACCGAATGGGTTTGACCACCGAGTTGGAGGGCGTCA
ATCTCATTGACGCGACGCGCCCGCTGATCTCGGACCCGTTCGAGGCGCACGAGGTAGACGAGCATGTGCAGGACTTGCTG
GCCGGGGATGGAAAGGGTATGCGGATGGAGGTCGACGCCGGCGGCGCCACGGTGCTGCTGCGGACTCTGCCGCTGGTGGT
AGCTGGTCGCAATGTCGGCGCCGCGATATTGATCCGCGACGTGACCGAGGTGAAGCGGCGCGACCGAGCCCTGATATCCA
AGGACGCCACGATCCGGGAAATCCATCATCGGGTTAAGAACAACCTGCAGACGGTGGCCGCGCTGTTGCGGCTGCAGGCT
CGCCGGACGTCCAACGCCGAGGGGCGGGAAGCGCTGATCGAGTCGGTGCGCCGAGTGTCGTCGATTGCCTTGGTCCACGA
TGCGTTGTCGATGTCGGTGGACGAGCAGGTGAACCTTGACGAGGTCATCGACCGGATTCTGCCGATCATGAACGATGTGG
CATCGGTGGACAGGCCGATCCGGATAAATCGGGTTGGCGACCTCGGTGTGCTCGACTCCGACCGCGCCACGGCGCTGATC
ATGGTGATCACCGAGCTGGTGCAGAACGCGATCGAGCATGCGTTCGACCCGGCGGCGGCGGAAGGGTCCGTGACGATTCG
AGCGGAACGCTCTGCGCGTTGGCTCGATGTCGTCGTGCACGACGACGGGCTTGGTCTGCCGCAAGGTTTCAGCCTGGAGA
AGTCGGACAGCCTGGGCCTGCAGATCGTGCGGACCTTGGTCTCTGCGGAATTGGACGGCTCGTTAGGTATGCGGGACGCC
CGCGAACGTGGCACCGATGTGGTGCTACGGGTACCGGTCGGACGCCGGGGACGGTTGATGCTGTAG

Upstream 100 bases:

>100_bases
GAAGCTGCCGGAACGGTCAGCAAGGTGGCGGTATCGGTGGGCGATGTCATTCAGGCCGGCGACCTTATCGCGGTGATCAG
CTAGTCGTTGATAGTCACTC

Downstream 100 bases:

>100_bases
CGCGCTACGCAACAGTGCGGCCCCGACGTATGTCGGGGCCGCACTGTGCAGAACTGAGTCGTCAGACCCCGGTACGGGCT
TTCGTGCGGGCGTTGCGACG

Product: two component sensor kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 501; Mature: 500

Protein sequence:

>501_residues
MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPNTGPTVVHTDAVGTVVAANSM
PLVAATFSGGVPGREGAVGQHNSCQHDGHSVEVSPVRFGDQVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEG
TFPDAGDVAMSRSSPRAGDGFIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEHVQDLL
AGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKDATIREIHHRVKNNLQTVAALLRLQA
RRTSNAEGREALIESVRRVSSIALVHDALSMSVDEQVNLDEVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALI
MVITELVQNAIEHAFDPAAAEGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELDGSLGMRDA
RERGTDVVLRVPVGRRGRLML

Sequences:

>Translated_501_residues
MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPNTGPTVVHTDAVGTVVAANSM
PLVAATFSGGVPGREGAVGQHNSCQHDGHSVEVSPVRFGDQVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEG
TFPDAGDVAMSRSSPRAGDGFIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEHVQDLL
AGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKDATIREIHHRVKNNLQTVAALLRLQA
RRTSNAEGREALIESVRRVSSIALVHDALSMSVDEQVNLDEVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALI
MVITELVQNAIEHAFDPAAAEGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELDGSLGMRDA
RERGTDVVLRVPVGRRGRLML
>Mature_500_residues
STLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPNTGPTVVHTDAVGTVVAANSMP
LVAATFSGGVPGREGAVGQHNSCQHDGHSVEVSPVRFGDQVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGT
FPDAGDVAMSRSSPRAGDGFIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEHVQDLLA
GDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKDATIREIHHRVKNNLQTVAALLRLQAR
RTSNAEGREALIESVRRVSSIALVHDALSMSVDEQVNLDEVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIM
VITELVQNAIEHAFDPAAAEGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELDGSLGMRDAR
ERGTDVVLRVPVGRRGRLML

Specific function: Member of the two-component regulatory system pdtaR/pdtaS. Autophosphorylates, probably on a histidine residue, and transfers its phosphate group to pdtaR [H]

COG id: COG3920

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR022066
- InterPro:   IPR011495
- InterPro:   IPR005467 [H]

Pfam domain/function: PF12282 H_kinase_N; PF02518 HATPase_c; PF07568 HisKA_2 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 54022; Mature: 53891

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPN
CCCHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHCCHHHHEEEEECCCCEEEEEEECCCC
TGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQHNSCQHDGHSVEVSPVRFGD
CCCEEEEECCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCH
QVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSPRAGDG
HHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCC
FIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEHVQDLL
EEEEEHHHEEECCCCCHHHHHHHCCCCEECCCCEEECCCCHHHCCCHHHHHHHHHHHHHH
AGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKDATIRE
HCCCCCEEEEECCCCCEEHHHHHHHHEECCCCCEEEEEHHHHHHHHHHHHHHCCCCHHHH
IHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPAAA
HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
EGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELDGSLGMRDA
CCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHH
RERGTDVVLRVPVGRRGRLML
HHCCCCEEEECCCCCCCCCCC
>Mature Secondary Structure 
STLGDLLAEHTVLPGSAVDHLHAVVGEWQLLADLSFADYLMWVRRDDGVLVCVAQCRPN
CCHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHCCHHHHEEEEECCCCEEEEEEECCCC
TGPTVVHTDAVGTVVAANSMPLVAATFSGGVPGREGAVGQHNSCQHDGHSVEVSPVRFGD
CCCEEEEECCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCH
QVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSPRAGDG
HHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCC
FIRLDVDGVVSYASPNALSAYHRMGLTTELEGVNLIDATRPLISDPFEAHEVDEHVQDLL
EEEEEHHHEEECCCCCHHHHHHHCCCCEECCCCEEECCCCHHHCCCHHHHHHHHHHHHHH
AGDGKGMRMEVDAGGATVLLRTLPLVVAGRNVGAAILIRDVTEVKRRDRALISKDATIRE
HCCCCCEEEEECCCCCEEHHHHHHHHEECCCCCEEEEEHHHHHHHHHHHHHHCCCCHHHH
IHHRVKNNLQTVAALLRLQARRTSNAEGREALIESVRRVSSIALVHDALSMSVDEQVNLD
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
EVIDRILPIMNDVASVDRPIRINRVGDLGVLDSDRATALIMVITELVQNAIEHAFDPAAA
HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
EGSVTIRAERSARWLDVVVHDDGLGLPQGFSLEKSDSLGLQIVRTLVSAELDGSLGMRDA
CCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHH
RERGTDVVLRVPVGRRGRLML
HHCCCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]