| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148824308
Identifier: 148824308
GI number: 148824308
Start: 3494511
End: 3495821
Strand: Direct
Name: 148824308
Synonym: TBFG_13135
Alternate gene names: NA
Gene position: 3494511-3495821 (Clockwise)
Preceding gene: 148824307
Following gene: 148824309
Centisome position: 78.98
GC content: 65.75
Gene sequence:
>1311_bases GTGGGCGGTCATCGCGTGATCCTTCGAAACGACCAGCAAAAGTCAATCGAAGGAAATGACGCAATGACCTCTTCTCATCT TATCGACACCGAGCAGCTTCTGGCTGACCAACTCGCACAGGCGAGCCCGGATCTGCTGCGCGGGCTGCTCTCGACGTTCA TCGCCGCCTTGATGGGGGCTGAAGCCGACGCCCTGTGCGGGGCGGGCTACCGCGAACGCAGCGATGAGCGGTCCAATCAG CGCAACGGCTACCGCCACCGTGATTTCGACACCCGTGCCGCAACCATCGACGTCGCGATCCCCAAGCTGCGCCAGGGCAG CTATTTCCCGGACTGGCTGCTGCAGCGCCGCAAGCGAGCTGAACGCGCACTGACCAGCGTGGTGGCGACCTGCTACCTGC TGGGAGTATCCACTCGCCGGATGGAGCGCCTGGTCGAAACACTTGGTGTGACAAAGCTTTCCAAGTCGCAAGTGTCGATC ATGGCCAAAGAGCTCGACGAAGCCGTAGAGGCGTTTCGGACCCGCCCGCTCGATGCCGGCCCGTATACCTTCCTCGCCGC CGACGCCCTGGTGCTCAAGGTGCGCGAGGCAGGCCGCGTCGTCGGGGTGCACACCTTGATCGCCACCGGCGTCAACGCCG AGGGCTACCGAGAGATCCTGGGCATCCAGGTCACCTCCGCCGAGGACGGGGCCGGCTGGCTGGCGTTCTTCCGCGACCTG GTCGCCCGCGGCCTGTCCGGGGTCGCGCTGGTCACCAGCGACGCCCACGCCGGCCTGGTGGCCGCGATCGGCGCCACCCT GCCCGCAGCGGCCTGGCAGCGCTGCAGAACCCACTACGCAGCCAATCTGATGGCAGCCACCCCGAAGCCCTCCTGGCCGT GGGTGCGCACCCTGCTGCACTCCATCTACGACCAGCCCGACGCCGAATCAGTTGTTGCCCAATATGATCGGGTACTCGAC GCTCTGACCGACAAACTCCCCGCGGTGGCCGAGCACCTCGACACCGCCCGCACCGACCTGCTGGCGTTCACCGCCTTCCC CAAGAAGATCTGGCGCCAAATCTGGTCCAACAACCCCCAGGAACGCCTCAACCGAGAGGTACGACGCCGAACCGACGTCG TGGGCATCTTCCCCGACCGCGCCTCGATCATCCGCCTCGTCGGAGCCGTCCTCGCCGAACAACACGACGAATGGATCGAA GGACGGCGCTACCTGGGCCTCGAGGTCCTCACCCGAGCCCGAGCAGCACTGACCAGCACCGAAGAACCCGCCAAGCAGCA AACCACCAACACCCCAGCACTGACCACCTAG
Upstream 100 bases:
>100_bases GACTCGGCTTGCCGACTACCTCACTGACCCAGGAGGAGAGTTACGTCCAGGGGTGTGGTGTACGGGCAGGTAAGGCCGGT GGGCGTGTCGTAGCCCAGTA
Downstream 100 bases:
>100_bases ACTGCCACCCGAAGGATCACGCGAGGAACCTTCACTCGTACACCACGTCCCTGGCCTTGGCCAGGAGGAGAGCAATCATG ACTGAAGCCTTGATCCCGGC
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 436; Mature: 435
Protein sequence:
>436_residues MGGHRVILRNDQQKSIEGNDAMTSSHLIDTEQLLADQLAQASPDLLRGLLSTFIAALMGAEADALCGAGYRERSDERSNQ RNGYRHRDFDTRAATIDVAIPKLRQGSYFPDWLLQRRKRAERALTSVVATCYLLGVSTRRMERLVETLGVTKLSKSQVSI MAKELDEAVEAFRTRPLDAGPYTFLAADALVLKVREAGRVVGVHTLIATGVNAEGYREILGIQVTSAEDGAGWLAFFRDL VARGLSGVALVTSDAHAGLVAAIGATLPAAAWQRCRTHYAANLMAATPKPSWPWVRTLLHSIYDQPDAESVVAQYDRVLD ALTDKLPAVAEHLDTARTDLLAFTAFPKKIWRQIWSNNPQERLNREVRRRTDVVGIFPDRASIIRLVGAVLAEQHDEWIE GRRYLGLEVLTRARAALTSTEEPAKQQTTNTPALTT
Sequences:
>Translated_436_residues MGGHRVILRNDQQKSIEGNDAMTSSHLIDTEQLLADQLAQASPDLLRGLLSTFIAALMGAEADALCGAGYRERSDERSNQ RNGYRHRDFDTRAATIDVAIPKLRQGSYFPDWLLQRRKRAERALTSVVATCYLLGVSTRRMERLVETLGVTKLSKSQVSI MAKELDEAVEAFRTRPLDAGPYTFLAADALVLKVREAGRVVGVHTLIATGVNAEGYREILGIQVTSAEDGAGWLAFFRDL VARGLSGVALVTSDAHAGLVAAIGATLPAAAWQRCRTHYAANLMAATPKPSWPWVRTLLHSIYDQPDAESVVAQYDRVLD ALTDKLPAVAEHLDTARTDLLAFTAFPKKIWRQIWSNNPQERLNREVRRRTDVVGIFPDRASIIRLVGAVLAEQHDEWIE GRRYLGLEVLTRARAALTSTEEPAKQQTTNTPALTT >Mature_435_residues GGHRVILRNDQQKSIEGNDAMTSSHLIDTEQLLADQLAQASPDLLRGLLSTFIAALMGAEADALCGAGYRERSDERSNQR NGYRHRDFDTRAATIDVAIPKLRQGSYFPDWLLQRRKRAERALTSVVATCYLLGVSTRRMERLVETLGVTKLSKSQVSIM AKELDEAVEAFRTRPLDAGPYTFLAADALVLKVREAGRVVGVHTLIATGVNAEGYREILGIQVTSAEDGAGWLAFFRDLV ARGLSGVALVTSDAHAGLVAAIGATLPAAAWQRCRTHYAANLMAATPKPSWPWVRTLLHSIYDQPDAESVVAQYDRVLDA LTDKLPAVAEHLDTARTDLLAFTAFPKKIWRQIWSNNPQERLNREVRRRTDVVGIFPDRASIIRLVGAVLAEQHDEWIEG RRYLGLEVLTRARAALTSTEEPAKQQTTNTPALTT
Specific function: Required for the transposition of the insertion element [H]
COG id: COG3328
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase mutator family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001207 [H]
Pfam domain/function: PF00872 Transposase_mut [H]
EC number: NA
Molecular weight: Translated: 48131; Mature: 48000
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: PS00435 PEROXIDASE_1 ; PS01007 TRANSPOSASE_MUTATOR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGHRVILRNDQQKSIEGNDAMTSSHLIDTEQLLADQLAQASPDLLRGLLSTFIAALMGA CCCCEEEEECCCHHCCCCCCCHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC EADALCGAGYRERSDERSNQRNGYRHRDFDTRAATIDVAIPKLRQGSYFPDWLLQRRKRA CHHHHHCCCCHHCCHHHHHHCCCCCCCCCCCHHEEEEEECCCCCCCCCCHHHHHHHHHHH ERALTSVVATCYLLGVSTRRMERLVETLGVTKLSKSQVSIMAKELDEAVEAFRTRPLDAG HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PYTFLAADALVLKVREAGRVVGVHTLIATGVNAEGYREILGIQVTSAEDGAGWLAFFRDL CHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHCEEEECCCCCCHHHHHHHHH VARGLSGVALVTSDAHAGLVAAIGATLPAAAWQRCRTHYAANLMAATPKPSWPWVRTLLH HHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH SIYDQPDAESVVAQYDRVLDALTDKLPAVAEHLDTARTDLLAFTAFPKKIWRQIWSNNPQ HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH ERLNREVRRRTDVVGIFPDRASIIRLVGAVLAEQHDEWIEGRRYLGLEVLTRARAALTST HHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCC EEPAKQQTTNTPALTT CCHHHHHCCCCCCCCC >Mature Secondary Structure GGHRVILRNDQQKSIEGNDAMTSSHLIDTEQLLADQLAQASPDLLRGLLSTFIAALMGA CCCEEEEECCCHHCCCCCCCHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC EADALCGAGYRERSDERSNQRNGYRHRDFDTRAATIDVAIPKLRQGSYFPDWLLQRRKRA CHHHHHCCCCHHCCHHHHHHCCCCCCCCCCCHHEEEEEECCCCCCCCCCHHHHHHHHHHH ERALTSVVATCYLLGVSTRRMERLVETLGVTKLSKSQVSIMAKELDEAVEAFRTRPLDAG HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PYTFLAADALVLKVREAGRVVGVHTLIATGVNAEGYREILGIQVTSAEDGAGWLAFFRDL CHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHCEEEECCCCCCHHHHHHHHH VARGLSGVALVTSDAHAGLVAAIGATLPAAAWQRCRTHYAANLMAATPKPSWPWVRTLLH HHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH SIYDQPDAESVVAQYDRVLDALTDKLPAVAEHLDTARTDLLAFTAFPKKIWRQIWSNNPQ HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH ERLNREVRRRTDVVGIFPDRASIIRLVGAVLAEQHDEWIEGRRYLGLEVLTRARAALTST HHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCC EEPAKQQTTNTPALTT CCHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1663885; 12788972 [H]