Definition Mycobacterium tuberculosis F11, complete genome.
Accession NC_009565
Length 4,424,435

Click here to switch to the map view.

The map label for this gene is 148824308

Identifier: 148824308

GI number: 148824308

Start: 3494511

End: 3495821

Strand: Direct

Name: 148824308

Synonym: TBFG_13135

Alternate gene names: NA

Gene position: 3494511-3495821 (Clockwise)

Preceding gene: 148824307

Following gene: 148824309

Centisome position: 78.98

GC content: 65.75

Gene sequence:

>1311_bases
GTGGGCGGTCATCGCGTGATCCTTCGAAACGACCAGCAAAAGTCAATCGAAGGAAATGACGCAATGACCTCTTCTCATCT
TATCGACACCGAGCAGCTTCTGGCTGACCAACTCGCACAGGCGAGCCCGGATCTGCTGCGCGGGCTGCTCTCGACGTTCA
TCGCCGCCTTGATGGGGGCTGAAGCCGACGCCCTGTGCGGGGCGGGCTACCGCGAACGCAGCGATGAGCGGTCCAATCAG
CGCAACGGCTACCGCCACCGTGATTTCGACACCCGTGCCGCAACCATCGACGTCGCGATCCCCAAGCTGCGCCAGGGCAG
CTATTTCCCGGACTGGCTGCTGCAGCGCCGCAAGCGAGCTGAACGCGCACTGACCAGCGTGGTGGCGACCTGCTACCTGC
TGGGAGTATCCACTCGCCGGATGGAGCGCCTGGTCGAAACACTTGGTGTGACAAAGCTTTCCAAGTCGCAAGTGTCGATC
ATGGCCAAAGAGCTCGACGAAGCCGTAGAGGCGTTTCGGACCCGCCCGCTCGATGCCGGCCCGTATACCTTCCTCGCCGC
CGACGCCCTGGTGCTCAAGGTGCGCGAGGCAGGCCGCGTCGTCGGGGTGCACACCTTGATCGCCACCGGCGTCAACGCCG
AGGGCTACCGAGAGATCCTGGGCATCCAGGTCACCTCCGCCGAGGACGGGGCCGGCTGGCTGGCGTTCTTCCGCGACCTG
GTCGCCCGCGGCCTGTCCGGGGTCGCGCTGGTCACCAGCGACGCCCACGCCGGCCTGGTGGCCGCGATCGGCGCCACCCT
GCCCGCAGCGGCCTGGCAGCGCTGCAGAACCCACTACGCAGCCAATCTGATGGCAGCCACCCCGAAGCCCTCCTGGCCGT
GGGTGCGCACCCTGCTGCACTCCATCTACGACCAGCCCGACGCCGAATCAGTTGTTGCCCAATATGATCGGGTACTCGAC
GCTCTGACCGACAAACTCCCCGCGGTGGCCGAGCACCTCGACACCGCCCGCACCGACCTGCTGGCGTTCACCGCCTTCCC
CAAGAAGATCTGGCGCCAAATCTGGTCCAACAACCCCCAGGAACGCCTCAACCGAGAGGTACGACGCCGAACCGACGTCG
TGGGCATCTTCCCCGACCGCGCCTCGATCATCCGCCTCGTCGGAGCCGTCCTCGCCGAACAACACGACGAATGGATCGAA
GGACGGCGCTACCTGGGCCTCGAGGTCCTCACCCGAGCCCGAGCAGCACTGACCAGCACCGAAGAACCCGCCAAGCAGCA
AACCACCAACACCCCAGCACTGACCACCTAG

Upstream 100 bases:

>100_bases
GACTCGGCTTGCCGACTACCTCACTGACCCAGGAGGAGAGTTACGTCCAGGGGTGTGGTGTACGGGCAGGTAAGGCCGGT
GGGCGTGTCGTAGCCCAGTA

Downstream 100 bases:

>100_bases
ACTGCCACCCGAAGGATCACGCGAGGAACCTTCACTCGTACACCACGTCCCTGGCCTTGGCCAGGAGGAGAGCAATCATG
ACTGAAGCCTTGATCCCGGC

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 435

Protein sequence:

>436_residues
MGGHRVILRNDQQKSIEGNDAMTSSHLIDTEQLLADQLAQASPDLLRGLLSTFIAALMGAEADALCGAGYRERSDERSNQ
RNGYRHRDFDTRAATIDVAIPKLRQGSYFPDWLLQRRKRAERALTSVVATCYLLGVSTRRMERLVETLGVTKLSKSQVSI
MAKELDEAVEAFRTRPLDAGPYTFLAADALVLKVREAGRVVGVHTLIATGVNAEGYREILGIQVTSAEDGAGWLAFFRDL
VARGLSGVALVTSDAHAGLVAAIGATLPAAAWQRCRTHYAANLMAATPKPSWPWVRTLLHSIYDQPDAESVVAQYDRVLD
ALTDKLPAVAEHLDTARTDLLAFTAFPKKIWRQIWSNNPQERLNREVRRRTDVVGIFPDRASIIRLVGAVLAEQHDEWIE
GRRYLGLEVLTRARAALTSTEEPAKQQTTNTPALTT

Sequences:

>Translated_436_residues
MGGHRVILRNDQQKSIEGNDAMTSSHLIDTEQLLADQLAQASPDLLRGLLSTFIAALMGAEADALCGAGYRERSDERSNQ
RNGYRHRDFDTRAATIDVAIPKLRQGSYFPDWLLQRRKRAERALTSVVATCYLLGVSTRRMERLVETLGVTKLSKSQVSI
MAKELDEAVEAFRTRPLDAGPYTFLAADALVLKVREAGRVVGVHTLIATGVNAEGYREILGIQVTSAEDGAGWLAFFRDL
VARGLSGVALVTSDAHAGLVAAIGATLPAAAWQRCRTHYAANLMAATPKPSWPWVRTLLHSIYDQPDAESVVAQYDRVLD
ALTDKLPAVAEHLDTARTDLLAFTAFPKKIWRQIWSNNPQERLNREVRRRTDVVGIFPDRASIIRLVGAVLAEQHDEWIE
GRRYLGLEVLTRARAALTSTEEPAKQQTTNTPALTT
>Mature_435_residues
GGHRVILRNDQQKSIEGNDAMTSSHLIDTEQLLADQLAQASPDLLRGLLSTFIAALMGAEADALCGAGYRERSDERSNQR
NGYRHRDFDTRAATIDVAIPKLRQGSYFPDWLLQRRKRAERALTSVVATCYLLGVSTRRMERLVETLGVTKLSKSQVSIM
AKELDEAVEAFRTRPLDAGPYTFLAADALVLKVREAGRVVGVHTLIATGVNAEGYREILGIQVTSAEDGAGWLAFFRDLV
ARGLSGVALVTSDAHAGLVAAIGATLPAAAWQRCRTHYAANLMAATPKPSWPWVRTLLHSIYDQPDAESVVAQYDRVLDA
LTDKLPAVAEHLDTARTDLLAFTAFPKKIWRQIWSNNPQERLNREVRRRTDVVGIFPDRASIIRLVGAVLAEQHDEWIEG
RRYLGLEVLTRARAALTSTEEPAKQQTTNTPALTT

Specific function: Required for the transposition of the insertion element [H]

COG id: COG3328

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase mutator family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001207 [H]

Pfam domain/function: PF00872 Transposase_mut [H]

EC number: NA

Molecular weight: Translated: 48131; Mature: 48000

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: PS00435 PEROXIDASE_1 ; PS01007 TRANSPOSASE_MUTATOR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGHRVILRNDQQKSIEGNDAMTSSHLIDTEQLLADQLAQASPDLLRGLLSTFIAALMGA
CCCCEEEEECCCHHCCCCCCCHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
EADALCGAGYRERSDERSNQRNGYRHRDFDTRAATIDVAIPKLRQGSYFPDWLLQRRKRA
CHHHHHCCCCHHCCHHHHHHCCCCCCCCCCCHHEEEEEECCCCCCCCCCHHHHHHHHHHH
ERALTSVVATCYLLGVSTRRMERLVETLGVTKLSKSQVSIMAKELDEAVEAFRTRPLDAG
HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PYTFLAADALVLKVREAGRVVGVHTLIATGVNAEGYREILGIQVTSAEDGAGWLAFFRDL
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHCEEEECCCCCCHHHHHHHHH
VARGLSGVALVTSDAHAGLVAAIGATLPAAAWQRCRTHYAANLMAATPKPSWPWVRTLLH
HHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
SIYDQPDAESVVAQYDRVLDALTDKLPAVAEHLDTARTDLLAFTAFPKKIWRQIWSNNPQ
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
ERLNREVRRRTDVVGIFPDRASIIRLVGAVLAEQHDEWIEGRRYLGLEVLTRARAALTST
HHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCC
EEPAKQQTTNTPALTT
CCHHHHHCCCCCCCCC
>Mature Secondary Structure 
GGHRVILRNDQQKSIEGNDAMTSSHLIDTEQLLADQLAQASPDLLRGLLSTFIAALMGA
CCCEEEEECCCHHCCCCCCCHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
EADALCGAGYRERSDERSNQRNGYRHRDFDTRAATIDVAIPKLRQGSYFPDWLLQRRKRA
CHHHHHCCCCHHCCHHHHHHCCCCCCCCCCCHHEEEEEECCCCCCCCCCHHHHHHHHHHH
ERALTSVVATCYLLGVSTRRMERLVETLGVTKLSKSQVSIMAKELDEAVEAFRTRPLDAG
HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PYTFLAADALVLKVREAGRVVGVHTLIATGVNAEGYREILGIQVTSAEDGAGWLAFFRDL
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHCEEEECCCCCCHHHHHHHHH
VARGLSGVALVTSDAHAGLVAAIGATLPAAAWQRCRTHYAANLMAATPKPSWPWVRTLLH
HHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
SIYDQPDAESVVAQYDRVLDALTDKLPAVAEHLDTARTDLLAFTAFPKKIWRQIWSNNPQ
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
ERLNREVRRRTDVVGIFPDRASIIRLVGAVLAEQHDEWIEGRRYLGLEVLTRARAALTST
HHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCC
EEPAKQQTTNTPALTT
CCHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1663885; 12788972 [H]