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The map label for this gene is garP [C]

Identifier: 148824184

GI number: 148824184

Start: 3362978

End: 3364315

Strand: Direct

Name: garP [C]

Synonym: TBFG_13009

Alternate gene names: 148824184

Gene position: 3362978-3364315 (Clockwise)

Preceding gene: 148824181

Following gene: 148824187

Centisome position: 76.01

GC content: 66.82

Gene sequence:

>1338_bases
ATGTCGCGAGATCCGACTGGGGTGGGTGCGCGCTGGGCGATCATGATCGTCTCGCTGGGGGTGACCGCAAGCTCGTTTCT
CTTCATCAACGGTGTCGCGTTCTTGATCCCCCGGCTGGAAAATGCGCGCGGAACCCCGCTATCTCACGCGGGTCTGTTGG
CGTCGATGCCCAGCTGGGGCCTGGTGGTCACGATGTTCGCCTGGGGCTATCTGCTCGATCACGTCGGCGAACGGATGGTG
ATGGCCGTGGGCTCGGCGCTGACCGCCGCGGCCGCCTACGCCGCGGCATCGGTTCATTCGCTGCTGTGGATCGGTGTCTT
CCTGTTTCTCGGCGGCATGGCCGCCGGTGGTTGCAACAGCGCCGGCGGGCGGCTGGTCTCGGGTTGGTTCCCGCCCCAGC
AACGCGGTCTGGCCATGGGAATCCGCCAGACCGCACAACCTTTGGGCATCGCCTCCGGCGCGTTGGTGATACCCGAACTG
GCCGAACGCGGGGTGCACGCAGGGCTGATGTTTCCCGCCGTCGTGTGCACGTTGGCCGCGGTGGCCAGCGTGCTCGGTAT
CGTCGACCCACCGCGAAAATCCCGCACGAAAGCCTCCGAACAGGAGCTGGCCAGCCCTTATCGGGGATCGTCGATCCTGT
GGCGGATACACGCGGCGTCGGCGTTGCTGATGATGCCGCAGACGGTGACCGTGACGTTCATGTTGGTCTGGCTGATCAAC
CACCACGGCTGGTCGGTCGCGCAGGCCGGTGTCTTGGTGACCATATCGCAGCTGCTGGGGGCGCTGGGCCGGGTCGCGGT
CGGCCGCTGGTCGGACCATGTCGGGTCACGCATGCGTCCCGTCCGCCTGATCGCCGCTGCCGCCGCGGCGACGTTGTTTC
TGCTCGCGGCGGTCGATAACGAGGGCTCGAGATATGACGTGCTGCTCATGATCGCCATCTCGGTGATCGCCGTTCTGGAC
AACGGGCTAGAAGCCACCGCGATCACCGAGTACGCCGGACCGTACTGGAGTGGCCGGGCGCTGGGTATCCAGAACACTAC
GCAGCGGCTGATGGCGGCCGCCGGACCCCCACTGTTCGGTAGTTTGATCACCACGGCGGCCTACCCGACGGCATGGGCCT
TATGCGGTGTGTTCCCGCTGGCCGCGGTGCCGCTGGTGCCGGTTCGGCTGCTCCCACCCGGCTTGGAGACTAGAGCGCGG
CGGCAATCCGTTCGCCGACATCGCTGGTGGCAAGCCGTTCGCTGCCACGCGTGGCCAAATGGGCCTCGACGGCCCGGTCC
ACCCGGGCAGCCGCGTCGTGTTCGCCAAGGTGGGACAGCAATAACGCCACCGACATGA

Upstream 100 bases:

>100_bases
CCGGCACGGCCCGATGAGGAGCCCGGCAATCAGACCCTGCCGGGCGCTGCGGGCCCTCACCATCGGGCCCCGTGCCGGGT
GACTGTGCCAGCATGGGTGG

Downstream 100 bases:

>100_bases
TCGCCGCCGTCGGGTCGGCGATGCCCTGACCGGCGATGTCCGGCGCGCTGCCATGCACCGGCTCGAACATCGACGGGTTG
GCCCGGGTCGCGTCGATATT

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 444

Protein sequence:

>445_residues
MSRDPTGVGARWAIMIVSLGVTASSFLFINGVAFLIPRLENARGTPLSHAGLLASMPSWGLVVTMFAWGYLLDHVGERMV
MAVGSALTAAAAYAAASVHSLLWIGVFLFLGGMAAGGCNSAGGRLVSGWFPPQQRGLAMGIRQTAQPLGIASGALVIPEL
AERGVHAGLMFPAVVCTLAAVASVLGIVDPPRKSRTKASEQELASPYRGSSILWRIHAASALLMMPQTVTVTFMLVWLIN
HHGWSVAQAGVLVTISQLLGALGRVAVGRWSDHVGSRMRPVRLIAAAAAATLFLLAAVDNEGSRYDVLLMIAISVIAVLD
NGLEATAITEYAGPYWSGRALGIQNTTQRLMAAAGPPLFGSLITTAAYPTAWALCGVFPLAAVPLVPVRLLPPGLETRAR
RQSVRRHRWWQAVRCHAWPNGPRRPGPPGQPRRVRQGGTAITPPT

Sequences:

>Translated_445_residues
MSRDPTGVGARWAIMIVSLGVTASSFLFINGVAFLIPRLENARGTPLSHAGLLASMPSWGLVVTMFAWGYLLDHVGERMV
MAVGSALTAAAAYAAASVHSLLWIGVFLFLGGMAAGGCNSAGGRLVSGWFPPQQRGLAMGIRQTAQPLGIASGALVIPEL
AERGVHAGLMFPAVVCTLAAVASVLGIVDPPRKSRTKASEQELASPYRGSSILWRIHAASALLMMPQTVTVTFMLVWLIN
HHGWSVAQAGVLVTISQLLGALGRVAVGRWSDHVGSRMRPVRLIAAAAAATLFLLAAVDNEGSRYDVLLMIAISVIAVLD
NGLEATAITEYAGPYWSGRALGIQNTTQRLMAAAGPPLFGSLITTAAYPTAWALCGVFPLAAVPLVPVRLLPPGLETRAR
RQSVRRHRWWQAVRCHAWPNGPRRPGPPGQPRRVRQGGTAITPPT
>Mature_444_residues
SRDPTGVGARWAIMIVSLGVTASSFLFINGVAFLIPRLENARGTPLSHAGLLASMPSWGLVVTMFAWGYLLDHVGERMVM
AVGSALTAAAAYAAASVHSLLWIGVFLFLGGMAAGGCNSAGGRLVSGWFPPQQRGLAMGIRQTAQPLGIASGALVIPELA
ERGVHAGLMFPAVVCTLAAVASVLGIVDPPRKSRTKASEQELASPYRGSSILWRIHAASALLMMPQTVTVTFMLVWLINH
HGWSVAQAGVLVTISQLLGALGRVAVGRWSDHVGSRMRPVRLIAAAAAATLFLLAAVDNEGSRYDVLLMIAISVIAVLDN
GLEATAITEYAGPYWSGRALGIQNTTQRLMAAAGPPLFGSLITTAAYPTAWALCGVFPLAAVPLVPVRLLPPGLETRARR
QSVRRHRWWQAVRCHAWPNGPRRPGPPGQPRRVRQGGTAITPPT

Specific function: Uptake Of D-Galactarate. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2994_MYCTU (Q7ARU7)

Other databases:

- EMBL:   BX842581
- EMBL:   AE000516
- PIR:   E70854
- RefSeq:   NP_217510.1
- RefSeq:   NP_337587.1
- ProteinModelPortal:   Q7ARU7
- EnsemblBacteria:   EBMYCT00000003611
- EnsemblBacteria:   EBMYCT00000072187
- GeneID:   888200
- GeneID:   925201
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT3072
- KEGG:   mtu:Rv2994
- TIGR:   MT3072
- TubercuList:   Rv2994
- GeneTree:   EBGT00050000014792
- HOGENOM:   HBG510154
- OMA:   ANMSFSA
- ProtClustDB:   CLSK872127
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196

Pfam domain/function: PF07690 MFS_1; SSF103473 MFS_gen_substrate_transporter

EC number: NA

Molecular weight: Translated: 47047; Mature: 46916

Theoretical pI: Translated: 11.77; Mature: 11.77

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1c62be58)-; HASH(0x1c07a4bc)-; HASH(0x1b34b600)-; HASH(0x1caf8520)-; HASH(0x1cbcf9e0)-; HASH(0x1cbdd4d4)-; HASH(0x1ce101a0)-; HASH(0x1cca6ca4)-;

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRDPTGVGARWAIMIVSLGVTASSFLFINGVAFLIPRLENARGTPLSHAGLLASMPSWG
CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCH
LVVTMFAWGYLLDHVGERMVMAVGSALTAAAAYAAASVHSLLWIGVFLFLGGMAAGGCNS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
AGGRLVSGWFPPQQRGLAMGIRQTAQPLGIASGALVIPELAERGVHAGLMFPAVVCTLAA
CCCCEEECCCCCHHCCHHHHHHHHCCCCCCCCCCEECHHHHHCCCCCHHHHHHHHHHHHH
VASVLGIVDPPRKSRTKASEQELASPYRGSSILWRIHAASALLMMPQTVTVTFMLVWLIN
HHHHHHCCCCCCHHHCCHHHHHHCCCCCCCCEEEEEEHHHHHHHCCHHHHHHHHHHHHHH
HHGWSVAQAGVLVTISQLLGALGRVAVGRWSDHVGSRMRPVRLIAAAAAATLFLLAAVDN
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHEECC
EGSRYDVLLMIAISVIAVLDNGLEATAITEYAGPYWSGRALGIQNTTQRLMAAAGPPLFG
CCCCHHHHHHHHHHHHHHHCCCCCCEEEHHHCCCCCCCEEECCCHHHHHHHHHCCCCHHH
SLITTAAYPTAWALCGVFPLAAVPLVPVRLLPPGLETRARRQSVRRHRWWQAVRCHAWPN
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHEECCCC
GPRRPGPPGQPRRVRQGGTAITPPT
CCCCCCCCCCCCHHHCCCCCCCCCH
>Mature Secondary Structure 
SRDPTGVGARWAIMIVSLGVTASSFLFINGVAFLIPRLENARGTPLSHAGLLASMPSWG
CCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCH
LVVTMFAWGYLLDHVGERMVMAVGSALTAAAAYAAASVHSLLWIGVFLFLGGMAAGGCNS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
AGGRLVSGWFPPQQRGLAMGIRQTAQPLGIASGALVIPELAERGVHAGLMFPAVVCTLAA
CCCCEEECCCCCHHCCHHHHHHHHCCCCCCCCCCEECHHHHHCCCCCHHHHHHHHHHHHH
VASVLGIVDPPRKSRTKASEQELASPYRGSSILWRIHAASALLMMPQTVTVTFMLVWLIN
HHHHHHCCCCCCHHHCCHHHHHHCCCCCCCCEEEEEEHHHHHHHCCHHHHHHHHHHHHHH
HHGWSVAQAGVLVTISQLLGALGRVAVGRWSDHVGSRMRPVRLIAAAAAATLFLLAAVDN
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHEECC
EGSRYDVLLMIAISVIAVLDNGLEATAITEYAGPYWSGRALGIQNTTQRLMAAAGPPLFG
CCCCHHHHHHHHHHHHHHHCCCCCCEEEHHHCCCCCCCEEECCCHHHHHHHHHCCCCHHH
SLITTAAYPTAWALCGVFPLAAVPLVPVRLLPPGLETRARRQSVRRHRWWQAVRCHAWPN
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHEECCCC
GPRRPGPPGQPRRVRQGGTAITPPT
CCCCCCCCCCCCHHHCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036