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The map label for this gene is lppX

Identifier: 148824134

GI number: 148824134

Start: 3302097

End: 3302798

Strand: Reverse

Name: lppX

Synonym: TBFG_12959

Alternate gene names: 148824134

Gene position: 3302798-3302097 (Counterclockwise)

Preceding gene: 148824135

Following gene: 148824129

Centisome position: 74.65

GC content: 59.97

Gene sequence:

>702_bases
ATGAATGATGGAAAACGGGCGGTGACGTCCGCTGTTCTGGTGGTGCTAGGTGCCTGCCTGGCGTTGTGGCTATCAGGATG
TTCTTCGCCGAAACCTGATGCCGAGGAACAGGGTGTTCCCGTGAGCCCGACGGCGTCCGACCCCGCGCTCCTCGCCGAGA
TCAGGCAGTCGCTTGATGCGACAAAAGGGTTGACCAGCGTGCACGTAGCGGTCCGAACAACCGGGAAAGTCGACAGCTTG
CTGGGTATTACCAGTGCCGATGTCGACGTCCGGGCCAATCCGCTCGCGGCAAAGGGCGTATGCACCTACAACGACGAGCA
GGGTGTCCCGTTTCGGGTACAAGGCGACAACATCTCGGTGAAACTGTTCGACGACTGGAGCAATCTCGGCTCGATTTCTG
AACTGTCAACTTCACGCGTGCTCGATCCTGCCGCTGGGGTGACGCAGCTGCTGTCCGGTGTCACGAACCTCCAAGCGCAA
GGTACCGAAGTGATAGACGGAATTTCGACCACCAAAATCACCGGGACCATCCCCGCGAGCTCTGTCAAGATGCTTGATCC
TGGCGCCAAGAGTGCAAGGCCGGCGACCGTGTGGATTGCCCAGGACGGCTCGCACCACCTCGTCCGAGCGAGCATCGACC
TCGGATCCGGGTCGATTCAGCTCACGCAGTCGAAATGGAACGAACCCGTCAACGTCGACTAG

Upstream 100 bases:

>100_bases
GAATGGCGCGAGTGAGGAGGCGGGCAGTCATGCCCAGCGTGATCCAATCAACCTGCATTCGGCCTGCGGGCCCATTTGAC
AATCGAGGTAGTGAGCGCAA

Downstream 100 bases:

>100_bases
GCCGAAGTTGCGTCGACGCGTTGCTCGAAACGCCCTTGTGAACGGTGTCAACGGCACCCGAAAACTGACCCCCTGACGGC
ATCTGAAAATTGACCCCCTA

Product: lipoprotein lppX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MNDGKRAVTSAVLVVLGACLALWLSGCSSPKPDAEEQGVPVSPTASDPALLAEIRQSLDATKGLTSVHVAVRTTGKVDSL
LGITSADVDVRANPLAAKGVCTYNDEQGVPFRVQGDNISVKLFDDWSNLGSISELSTSRVLDPAAGVTQLLSGVTNLQAQ
GTEVIDGISTTKITGTIPASSVKMLDPGAKSARPATVWIAQDGSHHLVRASIDLGSGSIQLTQSKWNEPVNVD

Sequences:

>Translated_233_residues
MNDGKRAVTSAVLVVLGACLALWLSGCSSPKPDAEEQGVPVSPTASDPALLAEIRQSLDATKGLTSVHVAVRTTGKVDSL
LGITSADVDVRANPLAAKGVCTYNDEQGVPFRVQGDNISVKLFDDWSNLGSISELSTSRVLDPAAGVTQLLSGVTNLQAQ
GTEVIDGISTTKITGTIPASSVKMLDPGAKSARPATVWIAQDGSHHLVRASIDLGSGSIQLTQSKWNEPVNVD
>Mature_233_residues
MNDGKRAVTSAVLVVLGACLALWLSGCSSPKPDAEEQGVPVSPTASDPALLAEIRQSLDATKGLTSVHVAVRTTGKVDSL
LGITSADVDVRANPLAAKGVCTYNDEQGVPFRVQGDNISVKLFDDWSNLGSISELSTSRVLDPAAGVTQLLSGVTNLQAQ
GTEVIDGISTTKITGTIPASSVKMLDPGAKSARPATVWIAQDGSHHLVRASIDLGSGSIQLTQSKWNEPVNVD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lppX/lprAFG lipoprotein family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): LPPX_MYCBO (P65307)

Other databases:

- EMBL:   BX248344
- RefSeq:   NP_856615.1
- ProteinModelPortal:   P65307
- SMR:   P65307
- EnsemblBacteria:   EBMYCT00000017511
- GeneID:   1092135
- GenomeReviews:   BX248333_GR
- KEGG:   mbo:Mb2970c
- GeneTree:   EBGT00050000017002
- HOGENOM:   HBG569188
- ProtClustDB:   CLSK792181
- BioCyc:   MBOV233413:MB2970C-MONOMER
- InterPro:   IPR009830
- ProDom:   PD017293

Pfam domain/function: PF07161 DUF1396

EC number: NA

Molecular weight: Translated: 24140; Mature: 24140

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDGKRAVTSAVLVVLGACLALWLSGCSSPKPDAEEQGVPVSPTASDPALLAEIRQSLDA
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHH
TKGLTSVHVAVRTTGKVDSLLGITSADVDVRANPLAAKGVCTYNDEQGVPFRVQGDNISV
HCCCEEEEEEEEECCCHHHHHCCCCCCCCCCCCCCEECCEEEECCCCCCEEEEECCCEEE
KLFDDWSNLGSISELSTSRVLDPAAGVTQLLSGVTNLQAQGTEVIDGISTTKITGTIPAS
EEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCEEEEEECCCCC
SVKMLDPGAKSARPATVWIAQDGSHHLVRASIDLGSGSIQLTQSKWNEPVNVD
CEEEECCCCCCCCCEEEEEEECCCCEEEEEEEECCCCEEEEEHHHCCCCCCCC
>Mature Secondary Structure
MNDGKRAVTSAVLVVLGACLALWLSGCSSPKPDAEEQGVPVSPTASDPALLAEIRQSLDA
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHH
TKGLTSVHVAVRTTGKVDSLLGITSADVDVRANPLAAKGVCTYNDEQGVPFRVQGDNISV
HCCCEEEEEEEEECCCHHHHHCCCCCCCCCCCCCCEECCEEEECCCCCCEEEEECCCEEE
KLFDDWSNLGSISELSTSRVLDPAAGVTQLLSGVTNLQAQGTEVIDGISTTKITGTIPAS
EEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCEEEEEECCCCC
SVKMLDPGAKSARPATVWIAQDGSHHLVRASIDLGSGSIQLTQSKWNEPVNVD
CEEEECCCCCCCCCEEEEEEECCCCEEEEEEEECCCCEEEEEHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12788972