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The map label for this gene is ycjL [C]

Identifier: 148824050

GI number: 148824050

Start: 3182358

End: 3183176

Strand: Reverse

Name: ycjL [C]

Synonym: TBFG_12875

Alternate gene names: 148824050

Gene position: 3183176-3182358 (Counterclockwise)

Preceding gene: 148824051

Following gene: 148824049

Centisome position: 71.95

GC content: 67.89

Gene sequence:

>819_bases
GTGGATTTGAGCGCCTCTAGGTCCGATGGTGGCGACCCGCTGCGCCCGGCTTCGCCGCGCTTGCGATCGCCACTGGGCGC
GAGTCGCCCGGTGGTTGGCCTGACGGCTTATCTGGAGCAGGTGCGCACCGGGGTTTGGGATATTCCTGCGGGTTATCTGC
CCGCCGATTACTTCGAAGGCATCACCATGGCCGGGGGTGTTGCGGTACTGCTGCCGCCGCAGCCGGTCGACCCCGAGAGC
GTCGGCTGCGTGCTGGACAGCCTGCACGCTCTGGTGATCACCGGGGGCTACGACCTGGACCCGGCAGCTTATGGCCAGGA
GCCGCATCCGGCCACCGATCACCCTCGCCCGGGCCGCGACGCTTGGGAGTTCGCGCTATTGCGGGGCGCGCTTCAGCGGG
GGATGCCCGTGTTGGGCATCTGTCGCGGCACCCAGGTGCTCAACGTCGCGCTCGGCGGCACGCTGCACCAGCACCTGCCC
GACATCCTTGGCCATAGCGGGCATCGGGCGGGCAACGGGGTCTTCACCAGGTTGCCGGTCCACACCGCATCGGGCACCCG
GTTGGCCGAGCTGATCGGCGAATCCGCCGACGTGCCGTGCTACCACCACCAAGCCATCGACCAGGTCGGTGAGGGCCTGG
TGGTCAGTGCGGTGGATGTCGACGGGGTAATCGAGGCGCTGGAGCTACCTGGGGACACGTTCGTACTAGCGGTGCAGTGG
CATCCGGAGAAGTCGTTGGACGATCTGCGGCTGTTTAAGGCGTTGGTGGACGCCGCCAGCGGATACGCGGGCCGGCAGAG
CCAAGCGGAGCCACGATGA

Upstream 100 bases:

>100_bases
CGCGAGGCGTTCGGCGAGGATGTTGTCGCGCACTACCTGAACAACGCGCGTGTGGAGCTGGCGGCGTTCAACGCGGCGGT
CACCGATTGGGAGAGGATAC

Downstream 100 bases:

>100_bases
GTACCACGCAACTGATCAATCCCGCCACCGAGGAAGTGCTGGCCTCAGTTGACCACACCGACGCCAACGCGGTGGACGAC
GCCGTGCAACGCGCGCGAGC

Product: amidotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MDLSASRSDGGDPLRPASPRLRSPLGASRPVVGLTAYLEQVRTGVWDIPAGYLPADYFEGITMAGGVAVLLPPQPVDPES
VGCVLDSLHALVITGGYDLDPAAYGQEPHPATDHPRPGRDAWEFALLRGALQRGMPVLGICRGTQVLNVALGGTLHQHLP
DILGHSGHRAGNGVFTRLPVHTASGTRLAELIGESADVPCYHHQAIDQVGEGLVVSAVDVDGVIEALELPGDTFVLAVQW
HPEKSLDDLRLFKALVDAASGYAGRQSQAEPR

Sequences:

>Translated_272_residues
MDLSASRSDGGDPLRPASPRLRSPLGASRPVVGLTAYLEQVRTGVWDIPAGYLPADYFEGITMAGGVAVLLPPQPVDPES
VGCVLDSLHALVITGGYDLDPAAYGQEPHPATDHPRPGRDAWEFALLRGALQRGMPVLGICRGTQVLNVALGGTLHQHLP
DILGHSGHRAGNGVFTRLPVHTASGTRLAELIGESADVPCYHHQAIDQVGEGLVVSAVDVDGVIEALELPGDTFVLAVQW
HPEKSLDDLRLFKALVDAASGYAGRQSQAEPR
>Mature_272_residues
MDLSASRSDGGDPLRPASPRLRSPLGASRPVVGLTAYLEQVRTGVWDIPAGYLPADYFEGITMAGGVAVLLPPQPVDPES
VGCVLDSLHALVITGGYDLDPAAYGQEPHPATDHPRPGRDAWEFALLRGALQRGMPVLGICRGTQVLNVALGGTLHQHLP
DILGHSGHRAGNGVFTRLPVHTASGTRLAELIGESADVPCYHHQAIDQVGEGLVVSAVDVDGVIEALELPGDTFVLAVQW
HPEKSLDDLRLFKALVDAASGYAGRQSQAEPR

Specific function: Unknown

COG id: COG2071

COG function: function code R; Predicted glutamine amidotransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081871, Length=240, Percent_Identity=30.4166666666667, Blast_Score=88, Evalue=7e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017926
- InterPro:   IPR011697 [H]

Pfam domain/function: PF07722 Peptidase_C26 [H]

EC number: NA

Molecular weight: Translated: 28724; Mature: 28724

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLSASRSDGGDPLRPASPRLRSPLGASRPVVGLTAYLEQVRTGVWDIPAGYLPADYFEG
CCCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHCC
ITMAGGVAVLLPPQPVDPESVGCVLDSLHALVITGGYDLDPAAYGQEPHPATDHPRPGRD
EEECCCEEEEECCCCCCHHHHHHHHHHHEEEEEECCCCCCHHHCCCCCCCCCCCCCCCCH
AWEFALLRGALQRGMPVLGICRGTQVLNVALGGTLHQHLPDILGHSGHRAGNGVFTRLPV
HHHHHHHHHHHHHCCCEEEEECCCEEEEHHHCCHHHHHHHHHHCCCCCCCCCCEEEEEEE
HTASGTRLAELIGESADVPCYHHQAIDQVGEGLVVSAVDVDGVIEALELPGDTFVLAVQW
ECCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEECHHHHHHHHHCCCCEEEEEEEE
HPEKSLDDLRLFKALVDAASGYAGRQSQAEPR
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MDLSASRSDGGDPLRPASPRLRSPLGASRPVVGLTAYLEQVRTGVWDIPAGYLPADYFEG
CCCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHCC
ITMAGGVAVLLPPQPVDPESVGCVLDSLHALVITGGYDLDPAAYGQEPHPATDHPRPGRD
EEECCCEEEEECCCCCCHHHHHHHHHHHEEEEEECCCCCCHHHCCCCCCCCCCCCCCCCH
AWEFALLRGALQRGMPVLGICRGTQVLNVALGGTLHQHLPDILGHSGHRAGNGVFTRLPV
HHHHHHHHHHHHHCCCEEEEECCCEEEEHHHCCHHHHHHHHHHCCCCCCCCCCEEEEEEE
HTASGTRLAELIGESADVPCYHHQAIDQVGEGLVVSAVDVDGVIEALELPGDTFVLAVQW
ECCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEECHHHHHHHHHCCCCEEEEEEEE
HPEKSLDDLRLFKALVDAASGYAGRQSQAEPR
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230 [H]