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The map label for this gene is azlB [H]

Identifier: 148823967

GI number: 148823967

Start: 3098170

End: 3098709

Strand: Reverse

Name: azlB [H]

Synonym: TBFG_12792

Alternate gene names: 148823967

Gene position: 3098709-3098170 (Counterclockwise)

Preceding gene: 148823969

Following gene: 148823966

Centisome position: 70.04

GC content: 60.37

Gene sequence:

>540_bases
ATGATAATTCTTTTTCGAGGCCATATGCGTGATAATTCAACGGAACACAAGACTCGCCGGGCTGCCTCGTCGAAGGATGT
TCGACCCGCTGAACTTGATGAGGTGGACCGCAGAATCCTGAGCTTGCTGCATGGCGATGCCAGAATGCCCAACAACGCGT
TAGCGGACACTGTCGGGATAGCGCCGTCGACGTGTCACGGCCGGGTTCGGCGGTTGGTGGACCTCGGCGTGATCCGGGGG
TTCTACACCGACATCGACCCGGTCGCGGTGGGTTTGCCGTTGCAGGCGATGATCTCGGTCAACTTGCAGTCGTCCGCTCG
CGGGAAAATCCGCAGCTTCATCCAGCAGATCCGCCGCAAACGGCAGGTGATGGATGTCTACTTTCTGGCCGGCGCCGACG
ATTTCATCTTGCACGTCGCCGCTCGCGACACCGAGGACCTGCGTTCGTTCGTGGTCGAAAACCTCAATGCCGACGCCGAC
GTCGCAGGTACCCAGACGTCCCTGATCTTCGAGCATCTGCGCGGGGCGGCGCCCATCTAG

Upstream 100 bases:

>100_bases
TTGTTTTTGGTCTCGGTCGGAATACCGACGCGCATGATTACCCCTCTCGATACTGTACGCTTCAGTGTGAAGAAAGTTCG
ATTAATCTGCAAGATTGCTG

Downstream 100 bases:

>100_bases
AGCGGCCCGCCCAGCGGGCTATGATCGCGGGATGCCAGACCCTGATGGGCCTTCTGTGACGGTCACCGTTGAGATCGACG
CCAATCCCGACCTGGTATAC

Product: Lrp/Asn family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MIILFRGHMRDNSTEHKTRRAASSKDVRPAELDEVDRRILSLLHGDARMPNNALADTVGIAPSTCHGRVRRLVDLGVIRG
FYTDIDPVAVGLPLQAMISVNLQSSARGKIRSFIQQIRRKRQVMDVYFLAGADDFILHVAARDTEDLRSFVVENLNADAD
VAGTQTSLIFEHLRGAAPI

Sequences:

>Translated_179_residues
MIILFRGHMRDNSTEHKTRRAASSKDVRPAELDEVDRRILSLLHGDARMPNNALADTVGIAPSTCHGRVRRLVDLGVIRG
FYTDIDPVAVGLPLQAMISVNLQSSARGKIRSFIQQIRRKRQVMDVYFLAGADDFILHVAARDTEDLRSFVVENLNADAD
VAGTQTSLIFEHLRGAAPI
>Mature_179_residues
MIILFRGHMRDNSTEHKTRRAASSKDVRPAELDEVDRRILSLLHGDARMPNNALADTVGIAPSTCHGRVRRLVDLGVIRG
FYTDIDPVAVGLPLQAMISVNLQSSARGKIRSFIQQIRRKRQVMDVYFLAGADDFILHVAARDTEDLRSFVVENLNADAD
VAGTQTSLIFEHLRGAAPI

Specific function: Transcriptional repressor of the azlBCD operon involved in branched-chain amino acid transport [H]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081742, Length=143, Percent_Identity=25.8741258741259, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1787116, Length=150, Percent_Identity=27.3333333333333, Blast_Score=70, Evalue=6e-14,
Organism=Escherichia coli, GI1790182, Length=146, Percent_Identity=26.027397260274, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 19872; Mature: 19872

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIILFRGHMRDNSTEHKTRRAASSKDVRPAELDEVDRRILSLLHGDARMPNNALADTVGI
CEEEEECCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCC
APSTCHGRVRRLVDLGVIRGFYTDIDPVAVGLPLQAMISVNLQSSARGKIRSFIQQIRRK
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHEECCCCCCHHHHHHHHHHHHHH
RQVMDVYFLAGADDFILHVAARDTEDLRSFVVENLNADADVAGTQTSLIFEHLRGAAPI
HHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIILFRGHMRDNSTEHKTRRAASSKDVRPAELDEVDRRILSLLHGDARMPNNALADTVGI
CEEEEECCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCC
APSTCHGRVRRLVDLGVIRGFYTDIDPVAVGLPLQAMISVNLQSSARGKIRSFIQQIRRK
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHEECCCCCCHHHHHHHHHHHHHH
RQVMDVYFLAGADDFILHVAARDTEDLRSFVVENLNADADVAGTQTSLIFEHLRGAAPI
HHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9287000; 9308178; 9384377 [H]