| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is ophA1 [H]
Identifier: 148823964
GI number: 148823964
Start: 3095329
End: 3096420
Strand: Reverse
Name: ophA1 [H]
Synonym: TBFG_12789
Alternate gene names: 148823964
Gene position: 3096420-3095329 (Counterclockwise)
Preceding gene: 148823965
Following gene: 148823962
Centisome position: 69.98
GC content: 67.95
Gene sequence:
>1092_bases ATGGCGGAGCGCACCGTGCCAGAGACCAGCTGGGCCAGTAGGCCCGCCGACCTTTACGGTCGCCGCAGCCGGGACCGCTT CTTCACAGCGCTGTGGGGTGTACGAGCGTTATTGGGAGGATTGGGCGCGGCCTCGCGGTGGGAACCGTCGCGGGTGCAGC CGGTGCGGCGCACGAATCCCGCGGTGGTTACCAAGCGCGAGCTGGTCGCTCCCGACGTGGTGGCGTTGACGTTGGCTGAC CCCGGTGGCGGATTGCTCCCGGCCTGGTCGCCCGGTGGGCACATCGACGTGCAGCTGCCCTCGGGGCGGCGCCGACAGTA CTCGTTGTGCGGTGTGCCCGGACGGCGTACGGACTACCGGATCGCCATTCGCAGAATCGCGGACGGCGGCGGCGGTTCGA TCGAGATGCACGAGGCCTTCGACGTAGGTGACACGTGCGAGTTCGAAGGTCCCCGCAACGCCTTCCATCTCGGTCTGGCC GAGCGTGACGTGCTTTTCGTGATCGGCGGTATCGGGGTGACGCCCATCCTGCCGATGATCCGGGCCGCCGAACAGCGCGG AATCGACTGGCGCGCAATCTATGCCGGTCGCGGTCGGGAGTACATGCCGTTCCTGGACGAGGTAGTGGCGGTGGCACCCG GCCGGGTCACGGTGTGGGCCGACGACGAGCACGGTCGTTTTGCGTCTGTCGATGAACTGTTGGCCGGCGCAGGGCCGACG ACGGCCGTTTACGTGTGCGGGCCGCCCGGGATGTTAGAAGCGGTGCGCGTGGCCCGCAATCAACACGCCGACGCGCCGCT GCATTACGAGCGATTCAGCCCGCCGCCGGTTGTCGACGGAGTTCCGTTCGAGCTGGAGCTCGCACGGTCGAGGCGAGTGC TCCGAGTTCCGGCGAACCGGTCGGCGCTGGACGTCATGCTCGACTGGGACCCGACGACGGCATACTCCTGCCAGCAGGGC TTCTGCGGGACCTGCAAGGTGAGAGTCCTTGCCGGGCAGGTCGACCGCCGCGGCCGCATCATCGAAGGCGATAACGAGAT GCTGGTCTGTGTGTCGCGGGCCGTGAGCGGTCGGGTGGTTATCGACGCCTGA
Upstream 100 bases:
>100_bases TTTCACCCGTCCCAGCTGGGCGGGCTGGGGGCGGCCGTGGACTACCTGGCCGTCTCGCCCGCCGCGCGAGCGTCGCACTG ATCGGTGACGATCCGTAGGA
Downstream 100 bases:
>100_bases TGCTTACCCGGGCGGGGCGGATCGATAAAGCCGGTAGCCCACATGGGGCACGTTCACACCTGACAGTGGTTTCCACGTGA AAGTGCGGCCGTCAATGTGA
Product: oxidoreductase
Products: NA
Alternate protein names: PDR [H]
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MAERTVPETSWASRPADLYGRRSRDRFFTALWGVRALLGGLGAASRWEPSRVQPVRRTNPAVVTKRELVAPDVVALTLAD PGGGLLPAWSPGGHIDVQLPSGRRRQYSLCGVPGRRTDYRIAIRRIADGGGGSIEMHEAFDVGDTCEFEGPRNAFHLGLA ERDVLFVIGGIGVTPILPMIRAAEQRGIDWRAIYAGRGREYMPFLDEVVAVAPGRVTVWADDEHGRFASVDELLAGAGPT TAVYVCGPPGMLEAVRVARNQHADAPLHYERFSPPPVVDGVPFELELARSRRVLRVPANRSALDVMLDWDPTTAYSCQQG FCGTCKVRVLAGQVDRRGRIIEGDNEMLVCVSRAVSGRVVIDA
Sequences:
>Translated_363_residues MAERTVPETSWASRPADLYGRRSRDRFFTALWGVRALLGGLGAASRWEPSRVQPVRRTNPAVVTKRELVAPDVVALTLAD PGGGLLPAWSPGGHIDVQLPSGRRRQYSLCGVPGRRTDYRIAIRRIADGGGGSIEMHEAFDVGDTCEFEGPRNAFHLGLA ERDVLFVIGGIGVTPILPMIRAAEQRGIDWRAIYAGRGREYMPFLDEVVAVAPGRVTVWADDEHGRFASVDELLAGAGPT TAVYVCGPPGMLEAVRVARNQHADAPLHYERFSPPPVVDGVPFELELARSRRVLRVPANRSALDVMLDWDPTTAYSCQQG FCGTCKVRVLAGQVDRRGRIIEGDNEMLVCVSRAVSGRVVIDA >Mature_362_residues AERTVPETSWASRPADLYGRRSRDRFFTALWGVRALLGGLGAASRWEPSRVQPVRRTNPAVVTKRELVAPDVVALTLADP GGGLLPAWSPGGHIDVQLPSGRRRQYSLCGVPGRRTDYRIAIRRIADGGGGSIEMHEAFDVGDTCEFEGPRNAFHLGLAE RDVLFVIGGIGVTPILPMIRAAEQRGIDWRAIYAGRGREYMPFLDEVVAVAPGRVTVWADDEHGRFASVDELLAGAGPTT AVYVCGPPGMLEAVRVARNQHADAPLHYERFSPPPVVDGVPFELELARSRRVLRVPANRSALDVMLDWDPTTAYSCQQGF CGTCKVRVLAGQVDRRGRIIEGDNEMLVCVSRAVSGRVVIDA
Specific function: Component of the electron transfer chain involved in pyridine nucleotide-dependent dihydroxylation of phthalate. Utilizes FMN to mediate electron transfer from the two-electron donor, NADH, to the one-electron acceptor, (2Fe-2S) [H]
COG id: COG1018
COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding FR-type domain [H]
Homologues:
Organism=Escherichia coli, GI1788104, Length=311, Percent_Identity=33.4405144694534, Blast_Score=158, Evalue=6e-40, Organism=Escherichia coli, GI1788903, Length=234, Percent_Identity=29.0598290598291, Blast_Score=69, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR017927 - InterPro: IPR001041 - InterPro: IPR008333 - InterPro: IPR001433 - InterPro: IPR000951 - InterPro: IPR017938 [H]
Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 39558; Mature: 39426
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2 ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAERTVPETSWASRPADLYGRRSRDRFFTALWGVRALLGGLGAASRWEPSRVQPVRRTNP CCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCHHCCCC AVVTKRELVAPDVVALTLADPGGGLLPAWSPGGHIDVQLPSGRRRQYSLCGVPGRRTDYR CEEEHHHHCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCE IAIRRIADGGGGSIEMHEAFDVGDTCEFEGPRNAFHLGLAERDVLFVIGGIGVTPILPMI EEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCHHHHHHHH RAAEQRGIDWRAIYAGRGREYMPFLDEVVAVAPGRVTVWADDEHGRFASVDELLAGAGPT HHHHHCCCEEEEEEECCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHCCCCC TAVYVCGPPGMLEAVRVARNQHADAPLHYERFSPPPVVDGVPFELELARSRRVLRVPANR EEEEEECCCCHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCEEEECCCCEEEECCCCC SALDVMLDWDPTTAYSCQQGFCGTCKVRVLAGQVDRRGRIIEGDNEMLVCVSRAVSGRVV CEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEECCCCEEEEEEECCCCEEE IDA EEC >Mature Secondary Structure AERTVPETSWASRPADLYGRRSRDRFFTALWGVRALLGGLGAASRWEPSRVQPVRRTNP CCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCHHCCCC AVVTKRELVAPDVVALTLADPGGGLLPAWSPGGHIDVQLPSGRRRQYSLCGVPGRRTDYR CEEEHHHHCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCE IAIRRIADGGGGSIEMHEAFDVGDTCEFEGPRNAFHLGLAERDVLFVIGGIGVTPILPMI EEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCHHHHHHHH RAAEQRGIDWRAIYAGRGREYMPFLDEVVAVAPGRVTVWADDEHGRFASVDELLAGAGPT HHHHHCCCEEEEEEECCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHCCCCC TAVYVCGPPGMLEAVRVARNQHADAPLHYERFSPPPVVDGVPFELELARSRRVLRVPANR EEEEEECCCCHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCEEEECCCCEEEECCCCC SALDVMLDWDPTTAYSCQQGFCGTCKVRVLAGQVDRRGRIIEGDNEMLVCVSRAVSGRVV CEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEECCCCEEEEEEECCCCEEE IDA EEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FMN. [C]
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9851995; 1280857 [H]