| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148823960
Identifier: 148823960
GI number: 148823960
Start: 3093074
End: 3093547
Strand: Reverse
Name: 148823960
Synonym: TBFG_12785
Alternate gene names: NA
Gene position: 3093547-3093074 (Counterclockwise)
Preceding gene: 148823961
Following gene: 148823959
Centisome position: 69.92
GC content: 68.99
Gene sequence:
>474_bases ATGACCAGGCGCACCCTGTATGTCCAGTTGATAATCGCGTTCATGTGCGTGGCGATGGTGGCGTACCTGGTTATGCTCGG GCGTGTCGCCGTCGCAATGATCGGTTCGGGCCGCGCCGCGGCTGCCGGGCTGGGGCTGGCGCTGCTGATCCTGCCGGTCA TTGGGCTGTGGGCCATGATTGCCACGCTGCGGGCCGGATTCGCGTATCAGCGGCTGGCCCGTCTGATCGCCGAAGACGGA CTGGACATCGACGCCAGCGCGCTGCCCCGCCGGGCTTCTGGCCGCATTCAGCGAGACGCGGCCGATGCGTTGTTCGCTGC CGTGCGCACCGAGCTCGAAGACGACGCCGACGACTGGCGCCGCTGGTACCGACTGGCGCGCGCCTACGACTACGCGGGGG ATCGGCGCCGCGCGCGGGAAGCGATGAAGACGGCCCTACAGCTAGAGGGGCGCGCTAGGCCGGGGGCCAGATGA
Upstream 100 bases:
>100_bases TTGTGCCCGGTGTGCTGTTGGCGGTGCGCCGCATCGCCGAACGCCCTGGTCTCACCGTAGGTCTTGAGCCCCTACTCGAT CTGCACTGACCGACACTGTG
Downstream 100 bases:
>100_bases CCACGTTGCCGGCCTTGGGCTACCTGTCCGGAGCGCTTCTGCACGCTTTGGTCGATTACCCCACTTTTAGTGACAGGGTC CTGCGGTGCGGCGCTTGCTG
Product: transmembrane protein
Products: NA
Alternate protein names: ORF Z [H]
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MTRRTLYVQLIIAFMCVAMVAYLVMLGRVAVAMIGSGRAAAAGLGLALLILPVIGLWAMIATLRAGFAYQRLARLIAEDG LDIDASALPRRASGRIQRDAADALFAAVRTELEDDADDWRRWYRLARAYDYAGDRRRAREAMKTALQLEGRARPGAR
Sequences:
>Translated_157_residues MTRRTLYVQLIIAFMCVAMVAYLVMLGRVAVAMIGSGRAAAAGLGLALLILPVIGLWAMIATLRAGFAYQRLARLIAEDG LDIDASALPRRASGRIQRDAADALFAAVRTELEDDADDWRRWYRLARAYDYAGDRRRAREAMKTALQLEGRARPGAR >Mature_156_residues TRRTLYVQLIIAFMCVAMVAYLVMLGRVAVAMIGSGRAAAAGLGLALLILPVIGLWAMIATLRAGFAYQRLARLIAEDGL DIDASALPRRASGRIQRDAADALFAAVRTELEDDADDWRRWYRLARAYDYAGDRRRAREAMKTALQLEGRARPGAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 TPR repeat [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR013105 - InterPro: IPR019734 [H]
Pfam domain/function: PF07719 TPR_2 [H]
EC number: NA
Molecular weight: Translated: 17327; Mature: 17195
Theoretical pI: Translated: 10.82; Mature: 10.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRRTLYVQLIIAFMCVAMVAYLVMLGRVAVAMIGSGRAAAAGLGLALLILPVIGLWAMI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH ATLRAGFAYQRLARLIAEDGLDIDASALPRRASGRIQRDAADALFAAVRTELEDDADDWR HHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHCCCHHHHHHHHHHHHHHHHHCCCHHHHH RWYRLARAYDYAGDRRRAREAMKTALQLEGRARPGAR HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TRRTLYVQLIIAFMCVAMVAYLVMLGRVAVAMIGSGRAAAAGLGLALLILPVIGLWAMI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH ATLRAGFAYQRLARLIAEDGLDIDASALPRRASGRIQRDAADALFAAVRTELEDDADDWR HHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHCCCHHHHHHHHHHHHHHHHHCCCHHHHH RWYRLARAYDYAGDRRRAREAMKTALQLEGRARPGAR HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8021227 [H]